Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0818

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0817 and B158DRAFT_0818 are separated by 124 nucleotidesB158DRAFT_0818 and B158DRAFT_0819 are separated by 116 nucleotides B158DRAFT_0817: B158DRAFT_0817 - tRNA_Met_CAT, at 829,269 to 829,345 _0817 B158DRAFT_0818: B158DRAFT_0818 - RNA polymerase sigma factor, sigma-70 family, at 829,470 to 831,317 _0818 B158DRAFT_0819: B158DRAFT_0819 - DNA primase, catalytic core, at 831,434 to 833,209 _0819 Position (kb) 829 830 831 832Strain fitness (log2 ratio) -2 -1 0 1 2 3at 828.471 kb on + strandat 828.498 kb on + strandat 828.549 kb on + strandat 828.557 kb on - strandat 828.557 kb on - strandat 828.557 kb on - strandat 828.561 kb on + strandat 828.561 kb on + strandat 828.561 kb on + strandat 828.562 kb on - strandat 828.562 kb on - strandat 828.569 kb on - strandat 828.569 kb on - strandat 828.569 kb on - strandat 828.613 kb on + strandat 828.627 kb on + strandat 828.637 kb on - strandat 828.642 kb on - strandat 828.649 kb on - strandat 828.656 kb on - strandat 828.701 kb on - strandat 828.712 kb on + strandat 828.720 kb on - strandat 828.843 kb on + strandat 828.843 kb on + strandat 828.851 kb on - strandat 828.851 kb on - strandat 829.013 kb on - strandat 829.133 kb on + strandat 829.136 kb on - strandat 829.160 kb on - strandat 829.185 kb on + strandat 829.224 kb on - strandat 829.236 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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828,471 + -1.0
828,498 + +1.2
828,549 + -0.1
828,557 - -1.8
828,557 - +1.5
828,557 - -0.5
828,561 + +0.5
828,561 + +0.0
828,561 + -0.6
828,562 - -0.8
828,562 - +0.5
828,569 - +1.3
828,569 - +3.4
828,569 - +0.0
828,613 + -0.6
828,627 + -2.7
828,637 - -0.3
828,642 - -1.3
828,649 - +2.3
828,656 - -1.8
828,701 - -0.9
828,712 + -0.1
828,720 - +0.1
828,843 + -1.8
828,843 + -0.6
828,851 - +0.8
828,851 - +0.1
829,013 - +0.1
829,133 + -0.5
829,136 - -0.8
829,160 - +2.6
829,185 + -0.7
829,224 - +0.6
829,236 - -1.0

Or see this region's nucleotide sequence