Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0805 and B158DRAFT_0806 are separated by 260 nucleotides B158DRAFT_0806 and B158DRAFT_0807 are separated by 1 nucleotides B158DRAFT_0807 and B158DRAFT_0808 overlap by 4 nucleotides B158DRAFT_0808 and B158DRAFT_0809 are separated by 56 nucleotides
B158DRAFT_0805: B158DRAFT_0805 - Cation/multidrug efflux pump, at 813,554 to 816,658
_0805
B158DRAFT_0806: B158DRAFT_0806 - hypothetical protein, at 816,919 to 817,314
_0806
B158DRAFT_0807: B158DRAFT_0807 - Predicted GTPase, at 817,316 to 817,858
_0807
B158DRAFT_0808: B158DRAFT_0808 - Uncharacterized distant relative of homeotic protein bithoraxoid, at 817,855 to 818,229
_0808
B158DRAFT_0809: B158DRAFT_0809 - hypothetical protein, at 818,286 to 818,645
_0809
Position (kb) 816
817
818 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 815.936 kb on + strand, within B158DRAFT_0805 at 815.949 kb on - strand, within B158DRAFT_0805 at 815.991 kb on + strand, within B158DRAFT_0805 at 816.003 kb on + strand, within B158DRAFT_0805 at 816.011 kb on - strand, within B158DRAFT_0805 at 816.082 kb on + strand, within B158DRAFT_0805 at 816.090 kb on - strand, within B158DRAFT_0805 at 816.121 kb on - strand, within B158DRAFT_0805 at 816.158 kb on + strand, within B158DRAFT_0805 at 816.204 kb on + strand, within B158DRAFT_0805 at 816.223 kb on + strand, within B158DRAFT_0805 at 816.339 kb on + strand, within B158DRAFT_0805 at 816.356 kb on + strand at 816.357 kb on + strand at 816.357 kb on + strand at 816.365 kb on - strand at 816.365 kb on - strand at 816.417 kb on + strand at 816.417 kb on + strand at 816.422 kb on + strand at 816.425 kb on - strand at 816.432 kb on + strand at 816.458 kb on + strand at 816.493 kb on - strand at 816.587 kb on - strand at 816.618 kb on - strand at 816.618 kb on - strand at 816.625 kb on + strand at 816.668 kb on + strand at 816.676 kb on - strand at 816.679 kb on + strand at 816.679 kb on + strand at 816.679 kb on + strand at 816.687 kb on - strand at 816.687 kb on - strand at 816.687 kb on - strand at 816.687 kb on - strand at 816.707 kb on + strand at 816.847 kb on + strand at 816.871 kb on + strand at 816.879 kb on - strand at 816.972 kb on - strand, within B158DRAFT_0806 at 816.972 kb on - strand, within B158DRAFT_0806 at 816.984 kb on + strand, within B158DRAFT_0806 at 816.986 kb on - strand, within B158DRAFT_0806 at 816.992 kb on - strand, within B158DRAFT_0806 at 816.992 kb on - strand, within B158DRAFT_0806 at 816.992 kb on - strand, within B158DRAFT_0806 at 817.046 kb on + strand, within B158DRAFT_0806 at 817.054 kb on - strand, within B158DRAFT_0806 at 817.088 kb on - strand, within B158DRAFT_0806 at 817.120 kb on + strand, within B158DRAFT_0806 at 817.137 kb on + strand, within B158DRAFT_0806 at 817.157 kb on + strand, within B158DRAFT_0806 at 817.180 kb on - strand, within B158DRAFT_0806 at 817.272 kb on - strand, within B158DRAFT_0806 at 817.299 kb on + strand at 817.299 kb on + strand at 817.307 kb on - strand at 817.308 kb on + strand at 817.308 kb on + strand at 817.316 kb on - strand at 817.490 kb on + strand, within B158DRAFT_0807 at 817.496 kb on + strand, within B158DRAFT_0807 at 817.496 kb on + strand, within B158DRAFT_0807 at 817.496 kb on + strand, within B158DRAFT_0807 at 817.504 kb on - strand, within B158DRAFT_0807 at 817.504 kb on - strand, within B158DRAFT_0807 at 817.729 kb on + strand, within B158DRAFT_0807 at 817.745 kb on + strand, within B158DRAFT_0807 at 817.761 kb on - strand, within B158DRAFT_0807 at 818.149 kb on + strand, within B158DRAFT_0808
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 815,936 + B158DRAFT_0805 0.77 -0.1 815,949 - B158DRAFT_0805 0.77 -0.7 815,991 + B158DRAFT_0805 0.78 -1.1 816,003 + B158DRAFT_0805 0.79 +0.9 816,011 - B158DRAFT_0805 0.79 -0.7 816,082 + B158DRAFT_0805 0.81 -0.2 816,090 - B158DRAFT_0805 0.82 -0.8 816,121 - B158DRAFT_0805 0.83 -0.5 816,158 + B158DRAFT_0805 0.84 -0.7 816,204 + B158DRAFT_0805 0.85 +1.3 816,223 + B158DRAFT_0805 0.86 -1.3 816,339 + B158DRAFT_0805 0.90 -0.9 816,356 + -2.0 816,357 + -0.3 816,357 + -2.6 816,365 - -0.8 816,365 - +0.5 816,417 + -0.4 816,417 + -1.0 816,422 + +2.7 816,425 - -0.2 816,432 + +0.6 816,458 + -1.2 816,493 - -0.5 816,587 - +2.2 816,618 - +0.3 816,618 - -1.7 816,625 + -0.4 816,668 + -0.9 816,676 - -0.7 816,679 + -0.1 816,679 + +1.0 816,679 + -0.1 816,687 - +0.4 816,687 - +0.8 816,687 - -0.6 816,687 - -1.4 816,707 + -0.0 816,847 + -0.9 816,871 + -0.5 816,879 - -0.8 816,972 - B158DRAFT_0806 0.13 -0.2 816,972 - B158DRAFT_0806 0.13 -1.6 816,984 + B158DRAFT_0806 0.16 -1.2 816,986 - B158DRAFT_0806 0.17 +1.0 816,992 - B158DRAFT_0806 0.18 -1.1 816,992 - B158DRAFT_0806 0.18 -2.8 816,992 - B158DRAFT_0806 0.18 -1.2 817,046 + B158DRAFT_0806 0.32 +0.2 817,054 - B158DRAFT_0806 0.34 -1.2 817,088 - B158DRAFT_0806 0.43 -1.1 817,120 + B158DRAFT_0806 0.51 -0.1 817,137 + B158DRAFT_0806 0.55 -1.6 817,157 + B158DRAFT_0806 0.60 -0.6 817,180 - B158DRAFT_0806 0.66 +0.4 817,272 - B158DRAFT_0806 0.89 -0.7 817,299 + +0.3 817,299 + -0.7 817,307 - -2.1 817,308 + -0.7 817,308 + -0.5 817,316 - -0.8 817,490 + B158DRAFT_0807 0.32 -0.0 817,496 + B158DRAFT_0807 0.33 -1.5 817,496 + B158DRAFT_0807 0.33 +0.6 817,496 + B158DRAFT_0807 0.33 +0.8 817,504 - B158DRAFT_0807 0.35 +0.9 817,504 - B158DRAFT_0807 0.35 -0.9 817,729 + B158DRAFT_0807 0.76 +1.5 817,745 + B158DRAFT_0807 0.79 -1.2 817,761 - B158DRAFT_0807 0.82 -2.6 818,149 + B158DRAFT_0808 0.78 -0.1
Or see this region's nucleotide sequence