Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0781

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0778 and B158DRAFT_0779 are separated by 186 nucleotidesB158DRAFT_0779 and B158DRAFT_0780 are separated by 12 nucleotidesB158DRAFT_0780 and B158DRAFT_0781 are separated by 209 nucleotidesB158DRAFT_0781 and B158DRAFT_0782 are separated by 143 nucleotides B158DRAFT_0778: B158DRAFT_0778 - DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18), at 782,596 to 783,405 _0778 B158DRAFT_0779: B158DRAFT_0779 - LSU ribosomal protein L33P, at 783,592 to 783,747 _0779 B158DRAFT_0780: B158DRAFT_0780 - ribosomal protein L28, at 783,760 to 783,996 _0780 B158DRAFT_0781: B158DRAFT_0781 - DNA repair protein radc, at 784,206 to 784,880 _0781 B158DRAFT_0782: B158DRAFT_0782 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic, at 785,024 to 786,223 _0782 Position (kb) 784 785Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 783.255 kb on + strand, within B158DRAFT_0778at 783.255 kb on + strand, within B158DRAFT_0778at 783.255 kb on + strand, within B158DRAFT_0778at 783.262 kb on + strand, within B158DRAFT_0778at 783.293 kb on + strand, within B158DRAFT_0778at 783.294 kb on + strand, within B158DRAFT_0778at 783.294 kb on + strand, within B158DRAFT_0778at 783.301 kb on - strand, within B158DRAFT_0778at 783.312 kb on - strand, within B158DRAFT_0778at 783.332 kb on + strandat 783.332 kb on + strandat 783.334 kb on + strandat 783.340 kb on + strandat 783.340 kb on - strandat 783.340 kb on - strandat 783.340 kb on - strandat 783.355 kb on + strandat 783.427 kb on + strandat 783.427 kb on + strandat 783.435 kb on - strandat 783.435 kb on - strandat 783.695 kb on + strand, within B158DRAFT_0779at 783.695 kb on + strand, within B158DRAFT_0779at 783.695 kb on + strand, within B158DRAFT_0779at 783.695 kb on + strand, within B158DRAFT_0779at 783.695 kb on + strand, within B158DRAFT_0779at 783.695 kb on + strand, within B158DRAFT_0779at 783.695 kb on + strand, within B158DRAFT_0779at 783.695 kb on + strand, within B158DRAFT_0779at 783.695 kb on + strand, within B158DRAFT_0779at 783.695 kb on + strand, within B158DRAFT_0779at 783.695 kb on + strand, within B158DRAFT_0779at 783.695 kb on + strand, within B158DRAFT_0779at 783.703 kb on - strand, within B158DRAFT_0779at 783.703 kb on - strand, within B158DRAFT_0779at 783.703 kb on - strand, within B158DRAFT_0779at 783.703 kb on - strand, within B158DRAFT_0779at 783.708 kb on - strand, within B158DRAFT_0779at 784.213 kb on + strandat 784.245 kb on - strandat 784.262 kb on + strandat 784.270 kb on - strandat 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.287 kb on + strand, within B158DRAFT_0781at 784.295 kb on - strand, within B158DRAFT_0781at 784.295 kb on - strand, within B158DRAFT_0781at 784.295 kb on - strand, within B158DRAFT_0781at 784.295 kb on - strand, within B158DRAFT_0781at 784.295 kb on - strand, within B158DRAFT_0781at 784.295 kb on - strand, within B158DRAFT_0781at 784.295 kb on - strand, within B158DRAFT_0781at 784.295 kb on - strand, within B158DRAFT_0781at 784.295 kb on - strand, within B158DRAFT_0781at 784.295 kb on - strand, within B158DRAFT_0781at 784.295 kb on - strand, within B158DRAFT_0781at 784.295 kb on - strand, within B158DRAFT_0781at 784.295 kb on - strand, within B158DRAFT_0781at 784.295 kb on - strand, within B158DRAFT_0781at 784.295 kb on - strand, within B158DRAFT_0781at 784.335 kb on + strand, within B158DRAFT_0781at 784.339 kb on - strand, within B158DRAFT_0781at 784.345 kb on - strand, within B158DRAFT_0781at 784.392 kb on + strand, within B158DRAFT_0781at 784.392 kb on + strand, within B158DRAFT_0781at 784.392 kb on + strand, within B158DRAFT_0781at 784.392 kb on + strand, within B158DRAFT_0781at 784.392 kb on + strand, within B158DRAFT_0781at 784.400 kb on - strand, within B158DRAFT_0781at 784.400 kb on - strand, within B158DRAFT_0781at 784.400 kb on - strand, within B158DRAFT_0781at 784.422 kb on - strand, within B158DRAFT_0781at 784.422 kb on - strand, within B158DRAFT_0781at 784.422 kb on - strand, within B158DRAFT_0781at 784.427 kb on + strand, within B158DRAFT_0781at 784.427 kb on + strand, within B158DRAFT_0781at 784.427 kb on + strand, within B158DRAFT_0781at 784.586 kb on + strand, within B158DRAFT_0781at 784.586 kb on + strand, within B158DRAFT_0781at 784.586 kb on + strand, within B158DRAFT_0781at 784.586 kb on + strand, within B158DRAFT_0781at 784.594 kb on - strand, within B158DRAFT_0781at 784.594 kb on - strand, within B158DRAFT_0781at 784.627 kb on - strand, within B158DRAFT_0781at 784.627 kb on - strand, within B158DRAFT_0781at 784.627 kb on - strand, within B158DRAFT_0781at 784.627 kb on - strand, within B158DRAFT_0781at 784.632 kb on - strand, within B158DRAFT_0781at 784.646 kb on + strand, within B158DRAFT_0781at 784.646 kb on + strand, within B158DRAFT_0781at 784.651 kb on + strand, within B158DRAFT_0781at 784.656 kb on + strand, within B158DRAFT_0781at 784.656 kb on + strand, within B158DRAFT_0781at 784.656 kb on + strand, within B158DRAFT_0781at 784.656 kb on + strand, within B158DRAFT_0781at 784.656 kb on + strand, within B158DRAFT_0781at 784.656 kb on + strand, within B158DRAFT_0781at 784.659 kb on - strand, within B158DRAFT_0781at 784.664 kb on - strand, within B158DRAFT_0781at 784.664 kb on - strand, within B158DRAFT_0781at 784.664 kb on - strand, within B158DRAFT_0781at 784.664 kb on - strand, within B158DRAFT_0781at 784.664 kb on - strand, within B158DRAFT_0781at 784.664 kb on - strand, within B158DRAFT_0781at 784.664 kb on - strand, within B158DRAFT_0781at 784.664 kb on - strand, within B158DRAFT_0781at 784.688 kb on + strand, within B158DRAFT_0781at 784.693 kb on + strand, within B158DRAFT_0781at 784.693 kb on + strand, within B158DRAFT_0781at 784.693 kb on + strand, within B158DRAFT_0781at 784.693 kb on + strand, within B158DRAFT_0781at 784.693 kb on + strand, within B158DRAFT_0781at 784.693 kb on + strand, within B158DRAFT_0781at 784.693 kb on + strand, within B158DRAFT_0781at 784.693 kb on + strand, within B158DRAFT_0781at 784.693 kb on + strand, within B158DRAFT_0781at 784.693 kb on + strand, within B158DRAFT_0781at 784.693 kb on + strand, within B158DRAFT_0781at 784.693 kb on + strand, within B158DRAFT_0781at 784.693 kb on + strand, within B158DRAFT_0781at 784.693 kb on + strand, within B158DRAFT_0781at 784.701 kb on - strand, within B158DRAFT_0781at 784.701 kb on - strand, within B158DRAFT_0781at 784.701 kb on - strand, within B158DRAFT_0781at 784.701 kb on - strand, within B158DRAFT_0781at 784.701 kb on - strand, within B158DRAFT_0781at 784.701 kb on - strand, within B158DRAFT_0781at 784.753 kb on + strand, within B158DRAFT_0781at 784.753 kb on + strand, within B158DRAFT_0781at 784.753 kb on + strand, within B158DRAFT_0781at 784.761 kb on - strand, within B158DRAFT_0781at 784.797 kb on - strand, within B158DRAFT_0781at 784.804 kb on - strand, within B158DRAFT_0781at 784.804 kb on - strand, within B158DRAFT_0781at 784.806 kb on + strand, within B158DRAFT_0781at 784.811 kb on + strand, within B158DRAFT_0781at 784.812 kb on + strand, within B158DRAFT_0781at 784.812 kb on + strand, within B158DRAFT_0781at 784.812 kb on + strand, within B158DRAFT_0781at 784.812 kb on + strand, within B158DRAFT_0781at 784.812 kb on + strand, within B158DRAFT_0781at 784.820 kb on - strandat 784.820 kb on - strandat 784.835 kb on + strandat 784.899 kb on - strandat 784.923 kb on + strandat 784.931 kb on - strandat 784.931 kb on - strandat 784.974 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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783,255 + B158DRAFT_0778 0.81 +0.2
783,255 + B158DRAFT_0778 0.81 -1.1
783,255 + B158DRAFT_0778 0.81 +5.2
783,262 + B158DRAFT_0778 0.82 +0.7
783,293 + B158DRAFT_0778 0.86 +1.0
783,294 + B158DRAFT_0778 0.86 -0.6
783,294 + B158DRAFT_0778 0.86 +1.7
783,301 - B158DRAFT_0778 0.87 -0.4
783,312 - B158DRAFT_0778 0.88 -1.6
783,332 + -1.1
783,332 + -0.3
783,334 + +3.7
783,340 + +0.3
783,340 - +0.5
783,340 - -0.3
783,340 - -0.8
783,355 + +0.5
783,427 + -1.2
783,427 + -0.4
783,435 - -0.7
783,435 - -1.0
783,695 + B158DRAFT_0779 0.66 +0.9
783,695 + B158DRAFT_0779 0.66 +2.7
783,695 + B158DRAFT_0779 0.66 -0.0
783,695 + B158DRAFT_0779 0.66 -0.2
783,695 + B158DRAFT_0779 0.66 +1.3
783,695 + B158DRAFT_0779 0.66 +0.2
783,695 + B158DRAFT_0779 0.66 +0.0
783,695 + B158DRAFT_0779 0.66 -0.7
783,695 + B158DRAFT_0779 0.66 +1.4
783,695 + B158DRAFT_0779 0.66 -1.2
783,695 + B158DRAFT_0779 0.66 +0.5
783,695 + B158DRAFT_0779 0.66 -1.2
783,703 - B158DRAFT_0779 0.71 +1.2
783,703 - B158DRAFT_0779 0.71 +0.9
783,703 - B158DRAFT_0779 0.71 -0.7
783,703 - B158DRAFT_0779 0.71 -0.8
783,708 - B158DRAFT_0779 0.74 -1.3
784,213 + +0.7
784,245 - -1.1
784,262 + -0.8
784,270 - -0.2
784,287 + B158DRAFT_0781 0.12 -0.2
784,287 + B158DRAFT_0781 0.12 +0.1
784,287 + B158DRAFT_0781 0.12 -2.4
784,287 + B158DRAFT_0781 0.12 -0.8
784,287 + B158DRAFT_0781 0.12 -0.4
784,287 + B158DRAFT_0781 0.12 -0.9
784,287 + B158DRAFT_0781 0.12 -1.1
784,287 + B158DRAFT_0781 0.12 -0.3
784,287 + B158DRAFT_0781 0.12 +0.7
784,287 + B158DRAFT_0781 0.12 -0.3
784,287 + B158DRAFT_0781 0.12 -0.1
784,287 + B158DRAFT_0781 0.12 -0.2
784,287 + B158DRAFT_0781 0.12 +0.1
784,287 + B158DRAFT_0781 0.12 -0.6
784,287 + B158DRAFT_0781 0.12 +0.2
784,287 + B158DRAFT_0781 0.12 -2.2
784,287 + B158DRAFT_0781 0.12 +0.1
784,287 + B158DRAFT_0781 0.12 -0.4
784,287 + B158DRAFT_0781 0.12 -0.7
784,287 + B158DRAFT_0781 0.12 +2.5
784,287 + B158DRAFT_0781 0.12 +1.0
784,287 + B158DRAFT_0781 0.12 -0.0
784,287 + B158DRAFT_0781 0.12 -2.3
784,287 + B158DRAFT_0781 0.12 -0.2
784,287 + B158DRAFT_0781 0.12 +0.4
784,287 + B158DRAFT_0781 0.12 +1.0
784,287 + B158DRAFT_0781 0.12 -0.1
784,295 - B158DRAFT_0781 0.13 +0.8
784,295 - B158DRAFT_0781 0.13 +0.1
784,295 - B158DRAFT_0781 0.13 +0.2
784,295 - B158DRAFT_0781 0.13 +0.2
784,295 - B158DRAFT_0781 0.13 +0.5
784,295 - B158DRAFT_0781 0.13 +0.1
784,295 - B158DRAFT_0781 0.13 +2.7
784,295 - B158DRAFT_0781 0.13 -0.9
784,295 - B158DRAFT_0781 0.13 +1.2
784,295 - B158DRAFT_0781 0.13 -0.3
784,295 - B158DRAFT_0781 0.13 -0.8
784,295 - B158DRAFT_0781 0.13 -1.3
784,295 - B158DRAFT_0781 0.13 +5.8
784,295 - B158DRAFT_0781 0.13 -1.2
784,295 - B158DRAFT_0781 0.13 +0.6
784,335 + B158DRAFT_0781 0.19 -2.6
784,339 - B158DRAFT_0781 0.20 +1.9
784,345 - B158DRAFT_0781 0.21 -0.1
784,392 + B158DRAFT_0781 0.28 -0.1
784,392 + B158DRAFT_0781 0.28 -0.1
784,392 + B158DRAFT_0781 0.28 -0.5
784,392 + B158DRAFT_0781 0.28 -2.0
784,392 + B158DRAFT_0781 0.28 -0.4
784,400 - B158DRAFT_0781 0.29 -0.8
784,400 - B158DRAFT_0781 0.29 -0.9
784,400 - B158DRAFT_0781 0.29 +0.5
784,422 - B158DRAFT_0781 0.32 -0.1
784,422 - B158DRAFT_0781 0.32 -1.9
784,422 - B158DRAFT_0781 0.32 -2.1
784,427 + B158DRAFT_0781 0.33 -0.3
784,427 + B158DRAFT_0781 0.33 -1.4
784,427 + B158DRAFT_0781 0.33 -0.9
784,586 + B158DRAFT_0781 0.56 -1.3
784,586 + B158DRAFT_0781 0.56 -0.5
784,586 + B158DRAFT_0781 0.56 -1.5
784,586 + B158DRAFT_0781 0.56 +0.8
784,594 - B158DRAFT_0781 0.57 -0.3
784,594 - B158DRAFT_0781 0.57 +0.5
784,627 - B158DRAFT_0781 0.62 +0.1
784,627 - B158DRAFT_0781 0.62 -2.0
784,627 - B158DRAFT_0781 0.62 -1.8
784,627 - B158DRAFT_0781 0.62 -0.2
784,632 - B158DRAFT_0781 0.63 +0.4
784,646 + B158DRAFT_0781 0.65 -0.4
784,646 + B158DRAFT_0781 0.65 -0.4
784,651 + B158DRAFT_0781 0.66 +0.3
784,656 + B158DRAFT_0781 0.67 -0.6
784,656 + B158DRAFT_0781 0.67 -1.0
784,656 + B158DRAFT_0781 0.67 +3.3
784,656 + B158DRAFT_0781 0.67 +0.4
784,656 + B158DRAFT_0781 0.67 -2.9
784,656 + B158DRAFT_0781 0.67 -1.6
784,659 - B158DRAFT_0781 0.67 -0.7
784,664 - B158DRAFT_0781 0.68 -0.7
784,664 - B158DRAFT_0781 0.68 +0.9
784,664 - B158DRAFT_0781 0.68 +1.2
784,664 - B158DRAFT_0781 0.68 +0.3
784,664 - B158DRAFT_0781 0.68 -0.3
784,664 - B158DRAFT_0781 0.68 -1.4
784,664 - B158DRAFT_0781 0.68 +0.1
784,664 - B158DRAFT_0781 0.68 +0.1
784,688 + B158DRAFT_0781 0.71 -2.3
784,693 + B158DRAFT_0781 0.72 +1.5
784,693 + B158DRAFT_0781 0.72 -0.3
784,693 + B158DRAFT_0781 0.72 -1.0
784,693 + B158DRAFT_0781 0.72 -0.0
784,693 + B158DRAFT_0781 0.72 -0.6
784,693 + B158DRAFT_0781 0.72 -0.3
784,693 + B158DRAFT_0781 0.72 -0.4
784,693 + B158DRAFT_0781 0.72 -1.3
784,693 + B158DRAFT_0781 0.72 -1.7
784,693 + B158DRAFT_0781 0.72 -0.9
784,693 + B158DRAFT_0781 0.72 -2.1
784,693 + B158DRAFT_0781 0.72 -1.1
784,693 + B158DRAFT_0781 0.72 -0.7
784,693 + B158DRAFT_0781 0.72 +0.6
784,701 - B158DRAFT_0781 0.73 -1.6
784,701 - B158DRAFT_0781 0.73 -0.8
784,701 - B158DRAFT_0781 0.73 +2.0
784,701 - B158DRAFT_0781 0.73 -3.6
784,701 - B158DRAFT_0781 0.73 -1.6
784,701 - B158DRAFT_0781 0.73 -0.5
784,753 + B158DRAFT_0781 0.81 -1.7
784,753 + B158DRAFT_0781 0.81 +0.4
784,753 + B158DRAFT_0781 0.81 +3.0
784,761 - B158DRAFT_0781 0.82 +0.1
784,797 - B158DRAFT_0781 0.88 -1.4
784,804 - B158DRAFT_0781 0.89 +0.5
784,804 - B158DRAFT_0781 0.89 -0.5
784,806 + B158DRAFT_0781 0.89 +0.2
784,811 + B158DRAFT_0781 0.90 +1.8
784,812 + B158DRAFT_0781 0.90 +0.7
784,812 + B158DRAFT_0781 0.90 -1.3
784,812 + B158DRAFT_0781 0.90 +0.5
784,812 + B158DRAFT_0781 0.90 -0.7
784,812 + B158DRAFT_0781 0.90 -1.3
784,820 - -1.8
784,820 - -1.1
784,835 + -0.9
784,899 - +1.2
784,923 + -1.9
784,931 - -1.0
784,931 - -0.4
784,974 + +3.2

Or see this region's nucleotide sequence