Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0770

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0768 and B158DRAFT_0769 overlap by 1 nucleotidesB158DRAFT_0769 and B158DRAFT_0770 overlap by 14 nucleotidesB158DRAFT_0770 and B158DRAFT_0771 are separated by 44 nucleotidesB158DRAFT_0771 and B158DRAFT_0772 are separated by 105 nucleotidesB158DRAFT_0772 and B158DRAFT_0773 are separated by 59 nucleotides B158DRAFT_0768: B158DRAFT_0768 - NAD-dependent aldehyde dehydrogenases, at 775,322 to 776,704 _0768 B158DRAFT_0769: B158DRAFT_0769 - hypothetical protein, at 776,704 to 777,294 _0769 B158DRAFT_0770: B158DRAFT_0770 - Choline dehydrogenase and related flavoproteins, at 777,281 to 778,831 _0770 B158DRAFT_0771: B158DRAFT_0771 - Phosphopantetheine adenylyltransferase (EC 2.7.7.3), at 778,876 to 779,358 _0771 B158DRAFT_0772: B158DRAFT_0772 - Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I), at 779,464 to 779,724 _0772 B158DRAFT_0773: B158DRAFT_0773 - Predicted esterase of the alpha-beta hydrolase superfamily, at 779,784 to 780,548 _0773 Position (kb) 777 778 779Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 776.378 kb on + strand, within B158DRAFT_0768at 776.417 kb on - strand, within B158DRAFT_0768at 776.471 kb on + strand, within B158DRAFT_0768at 776.473 kb on + strand, within B158DRAFT_0768at 776.475 kb on - strand, within B158DRAFT_0768at 776.479 kb on - strand, within B158DRAFT_0768at 776.538 kb on + strand, within B158DRAFT_0768at 776.538 kb on + strand, within B158DRAFT_0768at 776.538 kb on + strand, within B158DRAFT_0768at 776.538 kb on + strand, within B158DRAFT_0768at 776.538 kb on + strand, within B158DRAFT_0768at 776.538 kb on + strand, within B158DRAFT_0768at 776.546 kb on - strand, within B158DRAFT_0768at 776.546 kb on - strand, within B158DRAFT_0768at 776.546 kb on - strand, within B158DRAFT_0768at 776.551 kb on - strand, within B158DRAFT_0768at 776.558 kb on + strand, within B158DRAFT_0768at 776.571 kb on + strandat 776.581 kb on - strandat 776.610 kb on + strandat 776.620 kb on + strandat 776.652 kb on - strandat 776.712 kb on + strandat 776.768 kb on + strand, within B158DRAFT_0769at 776.797 kb on + strand, within B158DRAFT_0769at 776.797 kb on + strand, within B158DRAFT_0769at 776.797 kb on + strand, within B158DRAFT_0769at 776.797 kb on + strand, within B158DRAFT_0769at 776.805 kb on - strand, within B158DRAFT_0769at 776.805 kb on - strand, within B158DRAFT_0769at 776.831 kb on + strand, within B158DRAFT_0769at 776.831 kb on + strand, within B158DRAFT_0769at 776.851 kb on + strand, within B158DRAFT_0769at 776.851 kb on + strand, within B158DRAFT_0769at 776.859 kb on - strand, within B158DRAFT_0769at 776.895 kb on + strand, within B158DRAFT_0769at 776.903 kb on - strand, within B158DRAFT_0769at 776.903 kb on - strand, within B158DRAFT_0769at 776.903 kb on - strand, within B158DRAFT_0769at 776.903 kb on - strand, within B158DRAFT_0769at 776.919 kb on + strand, within B158DRAFT_0769at 776.919 kb on + strand, within B158DRAFT_0769at 776.919 kb on + strand, within B158DRAFT_0769at 776.919 kb on + strand, within B158DRAFT_0769at 776.919 kb on + strand, within B158DRAFT_0769at 776.919 kb on + strand, within B158DRAFT_0769at 776.919 kb on + strand, within B158DRAFT_0769at 776.919 kb on + strand, within B158DRAFT_0769at 776.919 kb on + strand, within B158DRAFT_0769at 776.919 kb on + strand, within B158DRAFT_0769at 776.919 kb on + strand, within B158DRAFT_0769at 776.919 kb on + strand, within B158DRAFT_0769at 776.919 kb on + strand, within B158DRAFT_0769at 776.919 kb on + strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.927 kb on - strand, within B158DRAFT_0769at 776.934 kb on + strand, within B158DRAFT_0769at 776.937 kb on - strand, within B158DRAFT_0769at 776.942 kb on - strand, within B158DRAFT_0769at 776.942 kb on - strand, within B158DRAFT_0769at 776.990 kb on + strand, within B158DRAFT_0769at 777.008 kb on - strand, within B158DRAFT_0769at 777.015 kb on + strand, within B158DRAFT_0769at 777.042 kb on + strand, within B158DRAFT_0769at 777.042 kb on + strand, within B158DRAFT_0769at 777.042 kb on + strand, within B158DRAFT_0769at 777.047 kb on + strand, within B158DRAFT_0769at 777.064 kb on + strand, within B158DRAFT_0769at 777.065 kb on - strand, within B158DRAFT_0769at 777.376 kb on - strandat 777.378 kb on + strandat 777.432 kb on - strandat 777.512 kb on + strand, within B158DRAFT_0770at 777.513 kb on - strand, within B158DRAFT_0770at 777.533 kb on + strand, within B158DRAFT_0770at 777.536 kb on + strand, within B158DRAFT_0770at 777.551 kb on - strand, within B158DRAFT_0770at 777.594 kb on + strand, within B158DRAFT_0770at 777.594 kb on + strand, within B158DRAFT_0770at 777.594 kb on + strand, within B158DRAFT_0770at 777.594 kb on + strand, within B158DRAFT_0770at 777.594 kb on + strand, within B158DRAFT_0770at 777.594 kb on + strand, within B158DRAFT_0770at 777.594 kb on + strand, within B158DRAFT_0770at 777.594 kb on + strand, within B158DRAFT_0770at 777.602 kb on - strand, within B158DRAFT_0770at 777.602 kb on - strand, within B158DRAFT_0770at 777.602 kb on - strand, within B158DRAFT_0770at 777.602 kb on - strand, within B158DRAFT_0770at 777.602 kb on - strand, within B158DRAFT_0770at 777.602 kb on - strand, within B158DRAFT_0770at 777.604 kb on - strand, within B158DRAFT_0770at 777.606 kb on + strand, within B158DRAFT_0770at 777.606 kb on + strand, within B158DRAFT_0770at 777.614 kb on - strand, within B158DRAFT_0770at 777.653 kb on + strand, within B158DRAFT_0770at 777.677 kb on - strand, within B158DRAFT_0770at 777.683 kb on + strand, within B158DRAFT_0770at 777.738 kb on - strand, within B158DRAFT_0770at 777.772 kb on - strand, within B158DRAFT_0770at 777.787 kb on - strand, within B158DRAFT_0770at 777.794 kb on + strand, within B158DRAFT_0770at 777.794 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.824 kb on + strand, within B158DRAFT_0770at 777.832 kb on - strand, within B158DRAFT_0770at 777.832 kb on - strand, within B158DRAFT_0770at 777.832 kb on - strand, within B158DRAFT_0770at 777.832 kb on - strand, within B158DRAFT_0770at 777.832 kb on - strand, within B158DRAFT_0770at 777.832 kb on - strand, within B158DRAFT_0770at 777.832 kb on - strand, within B158DRAFT_0770at 777.832 kb on - strand, within B158DRAFT_0770at 777.832 kb on - strand, within B158DRAFT_0770at 777.843 kb on + strand, within B158DRAFT_0770at 777.862 kb on + strand, within B158DRAFT_0770at 777.865 kb on - strand, within B158DRAFT_0770at 777.875 kb on - strand, within B158DRAFT_0770at 777.875 kb on - strand, within B158DRAFT_0770at 777.889 kb on - strand, within B158DRAFT_0770at 777.891 kb on - strand, within B158DRAFT_0770at 777.932 kb on + strand, within B158DRAFT_0770at 777.940 kb on - strand, within B158DRAFT_0770at 777.957 kb on + strand, within B158DRAFT_0770at 778.016 kb on + strand, within B158DRAFT_0770at 778.025 kb on + strand, within B158DRAFT_0770at 778.064 kb on + strand, within B158DRAFT_0770at 778.077 kb on + strand, within B158DRAFT_0770at 778.080 kb on - strand, within B158DRAFT_0770at 778.085 kb on - strand, within B158DRAFT_0770at 778.185 kb on - strand, within B158DRAFT_0770at 778.185 kb on - strand, within B158DRAFT_0770at 778.203 kb on - strand, within B158DRAFT_0770at 778.254 kb on - strand, within B158DRAFT_0770at 778.278 kb on + strand, within B158DRAFT_0770at 778.284 kb on - strand, within B158DRAFT_0770at 778.286 kb on + strand, within B158DRAFT_0770at 778.286 kb on + strand, within B158DRAFT_0770at 778.286 kb on - strand, within B158DRAFT_0770at 778.294 kb on - strand, within B158DRAFT_0770at 778.296 kb on + strand, within B158DRAFT_0770at 778.304 kb on - strand, within B158DRAFT_0770at 778.304 kb on - strand, within B158DRAFT_0770at 778.363 kb on - strand, within B158DRAFT_0770at 778.392 kb on + strand, within B158DRAFT_0770at 778.402 kb on - strand, within B158DRAFT_0770at 778.420 kb on - strand, within B158DRAFT_0770at 778.480 kb on + strand, within B158DRAFT_0770at 778.520 kb on - strand, within B158DRAFT_0770at 778.570 kb on + strand, within B158DRAFT_0770at 778.655 kb on - strand, within B158DRAFT_0770at 778.722 kb on - strandat 778.811 kb on + strandat 779.362 kb on - strandat 779.387 kb on + strandat 779.395 kb on - strandat 779.395 kb on - strandat 779.720 kb on + strandat 779.720 kb on + strandat 779.720 kb on + strandat 779.728 kb on - strandat 779.728 kb on - strandat 779.728 kb on - strandat 779.728 kb on - strandat 779.730 kb on + strandat 779.741 kb on + strandat 779.741 kb on + strandat 779.742 kb on + strandat 779.749 kb on - strandat 779.749 kb on - strandat 779.786 kb on + strandat 779.786 kb on + strandat 779.798 kb on + strandat 779.807 kb on + strandat 779.823 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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776,378 + B158DRAFT_0768 0.76 -0.7
776,417 - B158DRAFT_0768 0.79 +0.8
776,471 + B158DRAFT_0768 0.83 -0.6
776,473 + B158DRAFT_0768 0.83 -0.4
776,475 - B158DRAFT_0768 0.83 -0.5
776,479 - B158DRAFT_0768 0.84 -0.8
776,538 + B158DRAFT_0768 0.88 +0.4
776,538 + B158DRAFT_0768 0.88 +0.3
776,538 + B158DRAFT_0768 0.88 -0.7
776,538 + B158DRAFT_0768 0.88 -1.1
776,538 + B158DRAFT_0768 0.88 -0.1
776,538 + B158DRAFT_0768 0.88 -1.0
776,546 - B158DRAFT_0768 0.89 -0.1
776,546 - B158DRAFT_0768 0.89 -0.4
776,546 - B158DRAFT_0768 0.89 -0.1
776,551 - B158DRAFT_0768 0.89 +0.7
776,558 + B158DRAFT_0768 0.89 -1.1
776,571 + -0.2
776,581 - -0.2
776,610 + +0.0
776,620 + +1.2
776,652 - +3.4
776,712 + -1.0
776,768 + B158DRAFT_0769 0.11 +0.4
776,797 + B158DRAFT_0769 0.16 -0.7
776,797 + B158DRAFT_0769 0.16 +0.4
776,797 + B158DRAFT_0769 0.16 -1.5
776,797 + B158DRAFT_0769 0.16 +1.2
776,805 - B158DRAFT_0769 0.17 -0.9
776,805 - B158DRAFT_0769 0.17 -1.8
776,831 + B158DRAFT_0769 0.21 -1.2
776,831 + B158DRAFT_0769 0.21 -1.9
776,851 + B158DRAFT_0769 0.25 -0.8
776,851 + B158DRAFT_0769 0.25 -3.1
776,859 - B158DRAFT_0769 0.26 +1.0
776,895 + B158DRAFT_0769 0.32 +0.2
776,903 - B158DRAFT_0769 0.34 +0.0
776,903 - B158DRAFT_0769 0.34 -0.8
776,903 - B158DRAFT_0769 0.34 -0.8
776,903 - B158DRAFT_0769 0.34 +0.5
776,919 + B158DRAFT_0769 0.36 +0.8
776,919 + B158DRAFT_0769 0.36 -0.3
776,919 + B158DRAFT_0769 0.36 +2.5
776,919 + B158DRAFT_0769 0.36 -1.9
776,919 + B158DRAFT_0769 0.36 -0.8
776,919 + B158DRAFT_0769 0.36 -0.5
776,919 + B158DRAFT_0769 0.36 +2.8
776,919 + B158DRAFT_0769 0.36 -0.2
776,919 + B158DRAFT_0769 0.36 -1.3
776,919 + B158DRAFT_0769 0.36 -0.5
776,919 + B158DRAFT_0769 0.36 +0.3
776,919 + B158DRAFT_0769 0.36 +0.9
776,919 + B158DRAFT_0769 0.36 -0.4
776,919 + B158DRAFT_0769 0.36 +0.4
776,927 - B158DRAFT_0769 0.38 -1.6
776,927 - B158DRAFT_0769 0.38 -1.3
776,927 - B158DRAFT_0769 0.38 +0.4
776,927 - B158DRAFT_0769 0.38 -1.9
776,927 - B158DRAFT_0769 0.38 +0.3
776,927 - B158DRAFT_0769 0.38 -1.4
776,927 - B158DRAFT_0769 0.38 -0.6
776,927 - B158DRAFT_0769 0.38 -2.0
776,927 - B158DRAFT_0769 0.38 +1.6
776,927 - B158DRAFT_0769 0.38 +0.9
776,927 - B158DRAFT_0769 0.38 +5.3
776,927 - B158DRAFT_0769 0.38 -0.9
776,927 - B158DRAFT_0769 0.38 -0.1
776,927 - B158DRAFT_0769 0.38 -1.8
776,927 - B158DRAFT_0769 0.38 +0.8
776,927 - B158DRAFT_0769 0.38 -1.6
776,934 + B158DRAFT_0769 0.39 +0.1
776,937 - B158DRAFT_0769 0.39 -1.4
776,942 - B158DRAFT_0769 0.40 +2.6
776,942 - B158DRAFT_0769 0.40 -0.2
776,990 + B158DRAFT_0769 0.48 -1.2
777,008 - B158DRAFT_0769 0.51 -0.3
777,015 + B158DRAFT_0769 0.53 -0.6
777,042 + B158DRAFT_0769 0.57 -2.0
777,042 + B158DRAFT_0769 0.57 -1.0
777,042 + B158DRAFT_0769 0.57 +0.2
777,047 + B158DRAFT_0769 0.58 +0.1
777,064 + B158DRAFT_0769 0.61 -1.5
777,065 - B158DRAFT_0769 0.61 -0.8
777,376 - -3.3
777,378 + -0.4
777,432 - -0.9
777,512 + B158DRAFT_0770 0.15 -0.5
777,513 - B158DRAFT_0770 0.15 -0.3
777,533 + B158DRAFT_0770 0.16 -1.0
777,536 + B158DRAFT_0770 0.16 -0.9
777,551 - B158DRAFT_0770 0.17 -0.1
777,594 + B158DRAFT_0770 0.20 +0.1
777,594 + B158DRAFT_0770 0.20 -1.1
777,594 + B158DRAFT_0770 0.20 -1.6
777,594 + B158DRAFT_0770 0.20 -0.6
777,594 + B158DRAFT_0770 0.20 +1.1
777,594 + B158DRAFT_0770 0.20 -0.9
777,594 + B158DRAFT_0770 0.20 -1.1
777,594 + B158DRAFT_0770 0.20 +0.3
777,602 - B158DRAFT_0770 0.21 -1.3
777,602 - B158DRAFT_0770 0.21 -0.2
777,602 - B158DRAFT_0770 0.21 -0.1
777,602 - B158DRAFT_0770 0.21 -0.1
777,602 - B158DRAFT_0770 0.21 +0.5
777,602 - B158DRAFT_0770 0.21 -0.3
777,604 - B158DRAFT_0770 0.21 -0.7
777,606 + B158DRAFT_0770 0.21 -0.5
777,606 + B158DRAFT_0770 0.21 -1.1
777,614 - B158DRAFT_0770 0.21 -1.4
777,653 + B158DRAFT_0770 0.24 -0.1
777,677 - B158DRAFT_0770 0.26 -3.5
777,683 + B158DRAFT_0770 0.26 -1.1
777,738 - B158DRAFT_0770 0.29 -1.8
777,772 - B158DRAFT_0770 0.32 -0.6
777,787 - B158DRAFT_0770 0.33 -0.7
777,794 + B158DRAFT_0770 0.33 +1.1
777,794 + B158DRAFT_0770 0.33 +1.6
777,824 + B158DRAFT_0770 0.35 -0.6
777,824 + B158DRAFT_0770 0.35 -3.1
777,824 + B158DRAFT_0770 0.35 -0.3
777,824 + B158DRAFT_0770 0.35 -1.7
777,824 + B158DRAFT_0770 0.35 -0.3
777,824 + B158DRAFT_0770 0.35 -1.0
777,824 + B158DRAFT_0770 0.35 +0.4
777,824 + B158DRAFT_0770 0.35 +0.6
777,824 + B158DRAFT_0770 0.35 -2.8
777,824 + B158DRAFT_0770 0.35 +0.2
777,824 + B158DRAFT_0770 0.35 -0.8
777,824 + B158DRAFT_0770 0.35 -2.1
777,824 + B158DRAFT_0770 0.35 +2.5
777,824 + B158DRAFT_0770 0.35 +0.2
777,824 + B158DRAFT_0770 0.35 +0.6
777,824 + B158DRAFT_0770 0.35 -2.2
777,832 - B158DRAFT_0770 0.36 -0.4
777,832 - B158DRAFT_0770 0.36 -0.0
777,832 - B158DRAFT_0770 0.36 -0.1
777,832 - B158DRAFT_0770 0.36 -1.2
777,832 - B158DRAFT_0770 0.36 +0.6
777,832 - B158DRAFT_0770 0.36 -1.0
777,832 - B158DRAFT_0770 0.36 -3.0
777,832 - B158DRAFT_0770 0.36 -1.0
777,832 - B158DRAFT_0770 0.36 -0.9
777,843 + B158DRAFT_0770 0.36 -0.2
777,862 + B158DRAFT_0770 0.37 +0.4
777,865 - B158DRAFT_0770 0.38 -0.4
777,875 - B158DRAFT_0770 0.38 +1.1
777,875 - B158DRAFT_0770 0.38 -0.3
777,889 - B158DRAFT_0770 0.39 -2.3
777,891 - B158DRAFT_0770 0.39 -1.1
777,932 + B158DRAFT_0770 0.42 -0.8
777,940 - B158DRAFT_0770 0.42 -0.1
777,957 + B158DRAFT_0770 0.44 -2.8
778,016 + B158DRAFT_0770 0.47 -1.7
778,025 + B158DRAFT_0770 0.48 -0.5
778,064 + B158DRAFT_0770 0.50 -2.3
778,077 + B158DRAFT_0770 0.51 -1.5
778,080 - B158DRAFT_0770 0.52 -1.2
778,085 - B158DRAFT_0770 0.52 +1.7
778,185 - B158DRAFT_0770 0.58 -0.3
778,185 - B158DRAFT_0770 0.58 -1.6
778,203 - B158DRAFT_0770 0.59 -0.3
778,254 - B158DRAFT_0770 0.63 -1.3
778,278 + B158DRAFT_0770 0.64 +0.1
778,284 - B158DRAFT_0770 0.65 +0.3
778,286 + B158DRAFT_0770 0.65 -0.1
778,286 + B158DRAFT_0770 0.65 +1.2
778,286 - B158DRAFT_0770 0.65 -0.3
778,294 - B158DRAFT_0770 0.65 -0.6
778,296 + B158DRAFT_0770 0.65 -2.0
778,304 - B158DRAFT_0770 0.66 -0.2
778,304 - B158DRAFT_0770 0.66 +0.6
778,363 - B158DRAFT_0770 0.70 -1.3
778,392 + B158DRAFT_0770 0.72 +0.2
778,402 - B158DRAFT_0770 0.72 +3.8
778,420 - B158DRAFT_0770 0.73 +0.1
778,480 + B158DRAFT_0770 0.77 -0.6
778,520 - B158DRAFT_0770 0.80 -2.1
778,570 + B158DRAFT_0770 0.83 +0.5
778,655 - B158DRAFT_0770 0.89 -0.7
778,722 - -1.8
778,811 + -1.3
779,362 - -1.0
779,387 + -0.6
779,395 - -0.8
779,395 - -0.7
779,720 + +0.9
779,720 + -0.2
779,720 + -0.4
779,728 - -3.5
779,728 - -1.7
779,728 - +0.3
779,728 - -2.5
779,730 + -0.7
779,741 + +0.9
779,741 + -0.8
779,742 + +1.1
779,749 - -0.9
779,749 - -0.8
779,786 + -1.1
779,786 + +0.8
779,798 + -2.6
779,807 + +1.0
779,823 + -2.1

Or see this region's nucleotide sequence