Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0758 and B158DRAFT_0759 overlap by 1 nucleotides B158DRAFT_0759 and B158DRAFT_0760 overlap by 1 nucleotides B158DRAFT_0760 and B158DRAFT_0761 overlap by 4 nucleotides B158DRAFT_0761 and B158DRAFT_0762 are separated by 11 nucleotides
B158DRAFT_0758: B158DRAFT_0758 - type IV pilus assembly protein PilM, at 765,176 to 766,243
_0758
B158DRAFT_0759: B158DRAFT_0759 - Tfp pilus assembly protein PilN, at 766,243 to 766,818
_0759
B158DRAFT_0760: B158DRAFT_0760 - Tfp pilus assembly protein PilO, at 766,818 to 767,447
_0760
B158DRAFT_0761: B158DRAFT_0761 - Tfp pilus assembly protein PilP, at 767,444 to 768,004
_0761
B158DRAFT_0762: B158DRAFT_0762 - type IV pilus secretin (or competence protein) PilQ, at 768,016 to 770,106
_0762
Position (kb) 766
767
768 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 765.841 kb on + strand, within B158DRAFT_0758 at 765.951 kb on + strand, within B158DRAFT_0758 at 766.010 kb on - strand, within B158DRAFT_0758 at 766.177 kb on + strand at 766.177 kb on + strand at 766.185 kb on - strand at 766.575 kb on - strand, within B158DRAFT_0759 at 766.577 kb on + strand, within B158DRAFT_0759 at 766.585 kb on - strand, within B158DRAFT_0759 at 766.731 kb on + strand, within B158DRAFT_0759 at 766.778 kb on - strand at 766.810 kb on + strand at 766.899 kb on + strand, within B158DRAFT_0760 at 766.954 kb on + strand, within B158DRAFT_0760 at 766.956 kb on + strand, within B158DRAFT_0760 at 766.957 kb on - strand, within B158DRAFT_0760 at 766.962 kb on - strand, within B158DRAFT_0760 at 766.964 kb on - strand, within B158DRAFT_0760 at 766.973 kb on + strand, within B158DRAFT_0760 at 766.973 kb on + strand, within B158DRAFT_0760 at 766.973 kb on + strand, within B158DRAFT_0760 at 766.973 kb on + strand, within B158DRAFT_0760 at 767.036 kb on + strand, within B158DRAFT_0760 at 767.036 kb on + strand, within B158DRAFT_0760 at 767.079 kb on - strand, within B158DRAFT_0760 at 767.158 kb on + strand, within B158DRAFT_0760 at 767.599 kb on + strand, within B158DRAFT_0761 at 767.628 kb on - strand, within B158DRAFT_0761 at 767.644 kb on - strand, within B158DRAFT_0761 at 767.659 kb on + strand, within B158DRAFT_0761 at 767.970 kb on - strand at 767.990 kb on + strand at 768.001 kb on + strand at 768.004 kb on - strand at 768.030 kb on + strand at 768.142 kb on + strand at 768.233 kb on + strand, within B158DRAFT_0762 at 768.233 kb on + strand, within B158DRAFT_0762 at 768.233 kb on + strand, within B158DRAFT_0762 at 768.235 kb on + strand, within B158DRAFT_0762 at 768.243 kb on - strand, within B158DRAFT_0762 at 768.262 kb on + strand, within B158DRAFT_0762 at 768.294 kb on - strand, within B158DRAFT_0762 at 768.428 kb on + strand, within B158DRAFT_0762
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 765,841 + B158DRAFT_0758 0.62 +1.9 765,951 + B158DRAFT_0758 0.73 +2.9 766,010 - B158DRAFT_0758 0.78 +1.8 766,177 + -0.0 766,177 + +0.1 766,185 - +3.2 766,575 - B158DRAFT_0759 0.58 +1.3 766,577 + B158DRAFT_0759 0.58 -0.0 766,585 - B158DRAFT_0759 0.59 +1.9 766,731 + B158DRAFT_0759 0.85 +3.0 766,778 - +1.5 766,810 + -1.3 766,899 + B158DRAFT_0760 0.13 +0.9 766,954 + B158DRAFT_0760 0.22 -1.4 766,956 + B158DRAFT_0760 0.22 +1.2 766,957 - B158DRAFT_0760 0.22 +0.4 766,962 - B158DRAFT_0760 0.23 -0.8 766,964 - B158DRAFT_0760 0.23 +1.2 766,973 + B158DRAFT_0760 0.25 +2.6 766,973 + B158DRAFT_0760 0.25 +0.7 766,973 + B158DRAFT_0760 0.25 +1.2 766,973 + B158DRAFT_0760 0.25 +0.9 767,036 + B158DRAFT_0760 0.35 -0.6 767,036 + B158DRAFT_0760 0.35 -1.0 767,079 - B158DRAFT_0760 0.41 -0.8 767,158 + B158DRAFT_0760 0.54 -0.8 767,599 + B158DRAFT_0761 0.28 -0.1 767,628 - B158DRAFT_0761 0.33 -0.5 767,644 - B158DRAFT_0761 0.36 +0.2 767,659 + B158DRAFT_0761 0.38 -1.8 767,970 - +0.6 767,990 + +1.9 768,001 + +0.2 768,004 - +1.1 768,030 + +0.7 768,142 + -0.6 768,233 + B158DRAFT_0762 0.10 -0.6 768,233 + B158DRAFT_0762 0.10 -1.2 768,233 + B158DRAFT_0762 0.10 +0.7 768,235 + B158DRAFT_0762 0.10 +0.4 768,243 - B158DRAFT_0762 0.11 -2.7 768,262 + B158DRAFT_0762 0.12 -1.7 768,294 - B158DRAFT_0762 0.13 +0.4 768,428 + B158DRAFT_0762 0.20 -0.5
Or see this region's nucleotide sequence