Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0757

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0755 and B158DRAFT_0756 are separated by 135 nucleotidesB158DRAFT_0756 and B158DRAFT_0757 are separated by 92 nucleotidesB158DRAFT_0757 and B158DRAFT_0758 are separated by 242 nucleotides B158DRAFT_0755: B158DRAFT_0755 - hypothetical protein, at 759,199 to 761,853 _0755 B158DRAFT_0756: B158DRAFT_0756 - LSU ribosomal protein L31P, at 761,989 to 762,198 _0756 B158DRAFT_0757: B158DRAFT_0757 - penicillin-binding protein, 1A family, at 762,291 to 764,933 _0757 B158DRAFT_0758: B158DRAFT_0758 - type IV pilus assembly protein PilM, at 765,176 to 766,243 _0758 Position (kb) 762 763 764 765Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 761.293 kb on - strand, within B158DRAFT_0755at 761.311 kb on + strand, within B158DRAFT_0755at 761.311 kb on + strand, within B158DRAFT_0755at 761.343 kb on + strand, within B158DRAFT_0755at 761.363 kb on + strand, within B158DRAFT_0755at 761.363 kb on + strand, within B158DRAFT_0755at 761.363 kb on + strand, within B158DRAFT_0755at 761.363 kb on + strand, within B158DRAFT_0755at 761.363 kb on + strand, within B158DRAFT_0755at 761.371 kb on - strand, within B158DRAFT_0755at 761.371 kb on - strand, within B158DRAFT_0755at 761.371 kb on - strand, within B158DRAFT_0755at 761.371 kb on - strand, within B158DRAFT_0755at 761.386 kb on - strand, within B158DRAFT_0755at 761.405 kb on + strand, within B158DRAFT_0755at 761.413 kb on - strand, within B158DRAFT_0755at 761.424 kb on + strand, within B158DRAFT_0755at 761.432 kb on - strand, within B158DRAFT_0755at 761.432 kb on - strand, within B158DRAFT_0755at 761.433 kb on - strand, within B158DRAFT_0755at 761.461 kb on - strand, within B158DRAFT_0755at 761.463 kb on + strand, within B158DRAFT_0755at 761.463 kb on + strand, within B158DRAFT_0755at 761.463 kb on + strand, within B158DRAFT_0755at 761.463 kb on + strand, within B158DRAFT_0755at 761.463 kb on + strand, within B158DRAFT_0755at 761.471 kb on - strand, within B158DRAFT_0755at 761.471 kb on - strand, within B158DRAFT_0755at 761.471 kb on - strand, within B158DRAFT_0755at 761.515 kb on + strand, within B158DRAFT_0755at 761.523 kb on - strand, within B158DRAFT_0755at 761.523 kb on - strand, within B158DRAFT_0755at 761.523 kb on - strand, within B158DRAFT_0755at 761.523 kb on - strand, within B158DRAFT_0755at 761.534 kb on + strand, within B158DRAFT_0755at 761.537 kb on - strand, within B158DRAFT_0755at 761.537 kb on - strand, within B158DRAFT_0755at 761.543 kb on - strand, within B158DRAFT_0755at 761.576 kb on + strand, within B158DRAFT_0755at 761.591 kb on + strandat 761.591 kb on - strandat 761.596 kb on - strandat 761.601 kb on + strandat 761.601 kb on + strandat 761.601 kb on + strandat 761.601 kb on + strandat 761.609 kb on - strandat 761.609 kb on - strandat 761.623 kb on + strandat 761.623 kb on + strandat 761.631 kb on - strandat 761.639 kb on + strandat 761.639 kb on + strandat 761.729 kb on - strandat 761.941 kb on + strandat 761.941 kb on + strandat 761.941 kb on + strandat 761.941 kb on + strandat 761.941 kb on + strandat 761.941 kb on + strandat 761.941 kb on + strandat 761.941 kb on + strandat 761.949 kb on - strandat 761.949 kb on - strandat 761.949 kb on - strandat 761.971 kb on + strandat 762.119 kb on + strand, within B158DRAFT_0756at 762.308 kb on + strandat 762.319 kb on - strandat 762.321 kb on - strandat 762.403 kb on - strandat 762.435 kb on - strandat 762.494 kb on + strandat 762.511 kb on + strandat 763.903 kb on + strand, within B158DRAFT_0757at 764.601 kb on - strand, within B158DRAFT_0757at 764.603 kb on + strand, within B158DRAFT_0757at 764.997 kb on - strandat 765.140 kb on - strandat 765.163 kb on - strandat 765.187 kb on - strandat 765.187 kb on - strandat 765.206 kb on + strandat 765.229 kb on + strandat 765.318 kb on + strand, within B158DRAFT_0758at 765.467 kb on + strand, within B158DRAFT_0758at 765.471 kb on + strand, within B158DRAFT_0758at 765.510 kb on - strand, within B158DRAFT_0758at 765.510 kb on - strand, within B158DRAFT_0758at 765.525 kb on - strand, within B158DRAFT_0758at 765.541 kb on + strand, within B158DRAFT_0758at 765.568 kb on - strand, within B158DRAFT_0758at 765.743 kb on - strand, within B158DRAFT_0758at 765.785 kb on + strand, within B158DRAFT_0758at 765.795 kb on + strand, within B158DRAFT_0758at 765.795 kb on + strand, within B158DRAFT_0758at 765.795 kb on + strand, within B158DRAFT_0758at 765.841 kb on + strand, within B158DRAFT_0758

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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761,293 - B158DRAFT_0755 0.79 +1.4
761,311 + B158DRAFT_0755 0.80 -1.1
761,311 + B158DRAFT_0755 0.80 -0.5
761,343 + B158DRAFT_0755 0.81 -0.0
761,363 + B158DRAFT_0755 0.82 -2.0
761,363 + B158DRAFT_0755 0.82 -1.0
761,363 + B158DRAFT_0755 0.82 +1.7
761,363 + B158DRAFT_0755 0.82 -1.5
761,363 + B158DRAFT_0755 0.82 -0.2
761,371 - B158DRAFT_0755 0.82 -2.3
761,371 - B158DRAFT_0755 0.82 +0.9
761,371 - B158DRAFT_0755 0.82 -0.5
761,371 - B158DRAFT_0755 0.82 -0.8
761,386 - B158DRAFT_0755 0.82 -0.9
761,405 + B158DRAFT_0755 0.83 -0.1
761,413 - B158DRAFT_0755 0.83 +1.4
761,424 + B158DRAFT_0755 0.84 +4.9
761,432 - B158DRAFT_0755 0.84 -0.5
761,432 - B158DRAFT_0755 0.84 -0.4
761,433 - B158DRAFT_0755 0.84 -0.7
761,461 - B158DRAFT_0755 0.85 -1.4
761,463 + B158DRAFT_0755 0.85 +1.5
761,463 + B158DRAFT_0755 0.85 -0.7
761,463 + B158DRAFT_0755 0.85 -0.0
761,463 + B158DRAFT_0755 0.85 -2.3
761,463 + B158DRAFT_0755 0.85 -0.3
761,471 - B158DRAFT_0755 0.86 +0.6
761,471 - B158DRAFT_0755 0.86 -0.7
761,471 - B158DRAFT_0755 0.86 -1.4
761,515 + B158DRAFT_0755 0.87 +0.7
761,523 - B158DRAFT_0755 0.88 -0.5
761,523 - B158DRAFT_0755 0.88 -0.5
761,523 - B158DRAFT_0755 0.88 -0.3
761,523 - B158DRAFT_0755 0.88 -1.7
761,534 + B158DRAFT_0755 0.88 -1.1
761,537 - B158DRAFT_0755 0.88 -1.3
761,537 - B158DRAFT_0755 0.88 -1.3
761,543 - B158DRAFT_0755 0.88 +0.2
761,576 + B158DRAFT_0755 0.90 -0.3
761,591 + -2.6
761,591 - +0.2
761,596 - -1.8
761,601 + +0.7
761,601 + +0.3
761,601 + -2.6
761,601 + -0.6
761,609 - -1.8
761,609 - -1.3
761,623 + -0.9
761,623 + +1.2
761,631 - -0.9
761,639 + -3.2
761,639 + -0.2
761,729 - -0.9
761,941 + +3.0
761,941 + +3.8
761,941 + +3.0
761,941 + +3.6
761,941 + +3.0
761,941 + +3.9
761,941 + +3.3
761,941 + +2.7
761,949 - +4.0
761,949 - +2.7
761,949 - +3.2
761,971 + +4.0
762,119 + B158DRAFT_0756 0.62 +4.2
762,308 + -0.3
762,319 - +0.8
762,321 - -2.1
762,403 - -0.3
762,435 - +0.7
762,494 + -0.0
762,511 + +1.7
763,903 + B158DRAFT_0757 0.61 +0.8
764,601 - B158DRAFT_0757 0.87 +2.2
764,603 + B158DRAFT_0757 0.87 +1.4
764,997 - +0.9
765,140 - +1.8
765,163 - +1.9
765,187 - +0.3
765,187 - +1.2
765,206 + +0.4
765,229 + +1.4
765,318 + B158DRAFT_0758 0.13 +0.2
765,467 + B158DRAFT_0758 0.27 +1.9
765,471 + B158DRAFT_0758 0.28 +2.6
765,510 - B158DRAFT_0758 0.31 +2.1
765,510 - B158DRAFT_0758 0.31 +2.6
765,525 - B158DRAFT_0758 0.33 +2.7
765,541 + B158DRAFT_0758 0.34 +1.3
765,568 - B158DRAFT_0758 0.37 +1.7
765,743 - B158DRAFT_0758 0.53 -0.1
765,785 + B158DRAFT_0758 0.57 +1.8
765,795 + B158DRAFT_0758 0.58 +0.5
765,795 + B158DRAFT_0758 0.58 +1.5
765,795 + B158DRAFT_0758 0.58 +1.0
765,841 + B158DRAFT_0758 0.62 +1.9

Or see this region's nucleotide sequence