Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0703

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0701 and B158DRAFT_0702 are separated by 42 nucleotidesB158DRAFT_0702 and B158DRAFT_0703 are separated by 20 nucleotidesB158DRAFT_0703 and B158DRAFT_0704 are separated by 197 nucleotides B158DRAFT_0701: B158DRAFT_0701 - NTP pyrophosphohydrolases including oxidative damage repair enzymes, at 701,535 to 702,083 _0701 B158DRAFT_0702: B158DRAFT_0702 - hypothetical protein, at 702,126 to 702,656 _0702 B158DRAFT_0703: B158DRAFT_0703 - hypothetical protein, at 702,677 to 704,278 _0703 B158DRAFT_0704: B158DRAFT_0704 - C-terminal peptidase (prc), at 704,476 to 705,723 _0704 Position (kb) 702 703 704 705Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 701.688 kb on + strand, within B158DRAFT_0701at 701.781 kb on + strand, within B158DRAFT_0701at 701.841 kb on - strand, within B158DRAFT_0701at 701.877 kb on - strand, within B158DRAFT_0701at 702.314 kb on + strand, within B158DRAFT_0702at 702.370 kb on - strand, within B158DRAFT_0702at 702.371 kb on + strand, within B158DRAFT_0702at 702.479 kb on - strand, within B158DRAFT_0702at 702.550 kb on - strand, within B158DRAFT_0702at 702.691 kb on + strandat 702.719 kb on + strandat 702.719 kb on + strandat 702.905 kb on - strand, within B158DRAFT_0703at 702.926 kb on - strand, within B158DRAFT_0703at 702.986 kb on + strand, within B158DRAFT_0703at 702.994 kb on - strand, within B158DRAFT_0703at 702.994 kb on - strand, within B158DRAFT_0703at 703.041 kb on - strand, within B158DRAFT_0703at 703.138 kb on - strand, within B158DRAFT_0703at 703.251 kb on - strand, within B158DRAFT_0703at 703.305 kb on + strand, within B158DRAFT_0703at 703.311 kb on + strand, within B158DRAFT_0703at 703.377 kb on - strand, within B158DRAFT_0703at 703.414 kb on + strand, within B158DRAFT_0703at 703.430 kb on + strand, within B158DRAFT_0703at 703.438 kb on - strand, within B158DRAFT_0703at 703.590 kb on - strand, within B158DRAFT_0703at 703.631 kb on + strand, within B158DRAFT_0703at 703.658 kb on - strand, within B158DRAFT_0703at 703.702 kb on + strand, within B158DRAFT_0703at 703.797 kb on - strand, within B158DRAFT_0703at 703.811 kb on + strand, within B158DRAFT_0703at 703.821 kb on + strand, within B158DRAFT_0703at 703.821 kb on + strand, within B158DRAFT_0703at 703.821 kb on + strand, within B158DRAFT_0703at 703.829 kb on - strand, within B158DRAFT_0703at 703.919 kb on + strand, within B158DRAFT_0703at 703.922 kb on - strand, within B158DRAFT_0703at 704.003 kb on - strand, within B158DRAFT_0703at 704.005 kb on + strand, within B158DRAFT_0703at 704.040 kb on + strand, within B158DRAFT_0703at 704.042 kb on - strand, within B158DRAFT_0703at 704.048 kb on - strand, within B158DRAFT_0703at 704.048 kb on - strand, within B158DRAFT_0703at 704.110 kb on + strand, within B158DRAFT_0703at 704.134 kb on + strandat 704.151 kb on - strandat 704.181 kb on + strandat 704.181 kb on + strandat 704.181 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.195 kb on - strandat 704.197 kb on + strandat 704.197 kb on + strandat 704.200 kb on - strandat 704.205 kb on - strandat 704.272 kb on + strandat 704.293 kb on - strandat 704.346 kb on - strandat 704.394 kb on - strandat 704.522 kb on + strandat 704.598 kb on + strandat 704.598 kb on + strandat 704.598 kb on + strandat 704.606 kb on - strand, within B158DRAFT_0704at 704.606 kb on - strand, within B158DRAFT_0704at 704.626 kb on + strand, within B158DRAFT_0704at 704.671 kb on + strand, within B158DRAFT_0704at 704.687 kb on - strand, within B158DRAFT_0704at 704.733 kb on - strand, within B158DRAFT_0704at 704.734 kb on - strand, within B158DRAFT_0704at 704.744 kb on + strand, within B158DRAFT_0704at 704.749 kb on + strand, within B158DRAFT_0704at 704.749 kb on + strand, within B158DRAFT_0704at 704.757 kb on - strand, within B158DRAFT_0704at 704.890 kb on - strand, within B158DRAFT_0704at 704.905 kb on - strand, within B158DRAFT_0704at 705.069 kb on - strand, within B158DRAFT_0704at 705.200 kb on + strand, within B158DRAFT_0704at 705.200 kb on + strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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701,688 + B158DRAFT_0701 0.28 -1.7
701,781 + B158DRAFT_0701 0.45 -0.9
701,841 - B158DRAFT_0701 0.56 -0.9
701,877 - B158DRAFT_0701 0.62 +0.4
702,314 + B158DRAFT_0702 0.35 -1.4
702,370 - B158DRAFT_0702 0.46 +1.1
702,371 + B158DRAFT_0702 0.46 -1.3
702,479 - B158DRAFT_0702 0.66 -0.4
702,550 - B158DRAFT_0702 0.80 -0.4
702,691 + -2.2
702,719 + -1.1
702,719 + -1.8
702,905 - B158DRAFT_0703 0.14 -0.3
702,926 - B158DRAFT_0703 0.16 +0.1
702,986 + B158DRAFT_0703 0.19 -2.0
702,994 - B158DRAFT_0703 0.20 +0.8
702,994 - B158DRAFT_0703 0.20 -0.6
703,041 - B158DRAFT_0703 0.23 +2.4
703,138 - B158DRAFT_0703 0.29 +0.2
703,251 - B158DRAFT_0703 0.36 -0.1
703,305 + B158DRAFT_0703 0.39 -0.5
703,311 + B158DRAFT_0703 0.40 -0.1
703,377 - B158DRAFT_0703 0.44 +0.1
703,414 + B158DRAFT_0703 0.46 -0.1
703,430 + B158DRAFT_0703 0.47 -0.8
703,438 - B158DRAFT_0703 0.48 +0.5
703,590 - B158DRAFT_0703 0.57 -1.6
703,631 + B158DRAFT_0703 0.60 -2.1
703,658 - B158DRAFT_0703 0.61 -0.1
703,702 + B158DRAFT_0703 0.64 +1.0
703,797 - B158DRAFT_0703 0.70 +0.0
703,811 + B158DRAFT_0703 0.71 -0.6
703,821 + B158DRAFT_0703 0.71 -0.2
703,821 + B158DRAFT_0703 0.71 -1.1
703,821 + B158DRAFT_0703 0.71 +3.4
703,829 - B158DRAFT_0703 0.72 -2.6
703,919 + B158DRAFT_0703 0.78 +0.4
703,922 - B158DRAFT_0703 0.78 -0.0
704,003 - B158DRAFT_0703 0.83 +1.2
704,005 + B158DRAFT_0703 0.83 -0.8
704,040 + B158DRAFT_0703 0.85 +0.1
704,042 - B158DRAFT_0703 0.85 +0.2
704,048 - B158DRAFT_0703 0.86 -0.2
704,048 - B158DRAFT_0703 0.86 -2.0
704,110 + B158DRAFT_0703 0.89 -0.2
704,134 + -2.9
704,151 - -1.4
704,181 + +0.3
704,181 + -0.8
704,181 + -2.0
704,182 + -1.4
704,182 + +1.6
704,182 + -1.9
704,182 + -0.3
704,182 + +0.9
704,182 + +0.2
704,182 + -0.3
704,182 + -1.2
704,182 + -1.4
704,190 - +3.4
704,190 - -0.3
704,190 - -0.6
704,190 - +0.5
704,190 - -1.4
704,190 - -1.5
704,190 - -0.4
704,190 - +1.0
704,190 - +3.3
704,190 - +0.0
704,195 - -0.3
704,197 + -0.8
704,197 + -0.4
704,200 - -2.4
704,205 - -0.5
704,272 + +2.1
704,293 - +0.6
704,346 - -0.9
704,394 - -0.4
704,522 + +1.3
704,598 + +0.8
704,598 + +3.3
704,598 + -0.7
704,606 - B158DRAFT_0704 0.10 +1.0
704,606 - B158DRAFT_0704 0.10 +1.7
704,626 + B158DRAFT_0704 0.12 +0.8
704,671 + B158DRAFT_0704 0.16 +1.7
704,687 - B158DRAFT_0704 0.17 +1.7
704,733 - B158DRAFT_0704 0.21 +3.3
704,734 - B158DRAFT_0704 0.21 +2.3
704,744 + B158DRAFT_0704 0.21 +1.5
704,749 + B158DRAFT_0704 0.22 +0.8
704,749 + B158DRAFT_0704 0.22 +4.3
704,757 - B158DRAFT_0704 0.23 +2.3
704,890 - B158DRAFT_0704 0.33 +1.7
704,905 - B158DRAFT_0704 0.34 +3.3
705,069 - B158DRAFT_0704 0.48 +1.0
705,200 + B158DRAFT_0704 0.58 +0.1
705,200 + B158DRAFT_0704 0.58 +1.5
705,208 - B158DRAFT_0704 0.59 +1.3
705,208 - B158DRAFT_0704 0.59 +4.3
705,208 - B158DRAFT_0704 0.59 +1.5
705,208 - B158DRAFT_0704 0.59 +1.5

Or see this region's nucleotide sequence