Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0702

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0700 and B158DRAFT_0701 are separated by 7 nucleotidesB158DRAFT_0701 and B158DRAFT_0702 are separated by 42 nucleotidesB158DRAFT_0702 and B158DRAFT_0703 are separated by 20 nucleotides B158DRAFT_0700: B158DRAFT_0700 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED, at 700,853 to 701,527 _0700 B158DRAFT_0701: B158DRAFT_0701 - NTP pyrophosphohydrolases including oxidative damage repair enzymes, at 701,535 to 702,083 _0701 B158DRAFT_0702: B158DRAFT_0702 - hypothetical protein, at 702,126 to 702,656 _0702 B158DRAFT_0703: B158DRAFT_0703 - hypothetical protein, at 702,677 to 704,278 _0703 Position (kb) 702 703Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 701.139 kb on + strand, within B158DRAFT_0700at 701.168 kb on - strand, within B158DRAFT_0700at 701.212 kb on + strand, within B158DRAFT_0700at 701.212 kb on + strand, within B158DRAFT_0700at 701.224 kb on + strand, within B158DRAFT_0700at 701.232 kb on - strand, within B158DRAFT_0700at 701.232 kb on - strand, within B158DRAFT_0700at 701.281 kb on + strand, within B158DRAFT_0700at 701.281 kb on + strand, within B158DRAFT_0700at 701.289 kb on - strand, within B158DRAFT_0700at 701.309 kb on + strand, within B158DRAFT_0700at 701.434 kb on + strand, within B158DRAFT_0700at 701.463 kb on - strandat 701.488 kb on - strandat 701.545 kb on - strandat 701.648 kb on + strand, within B158DRAFT_0701at 701.648 kb on + strand, within B158DRAFT_0701at 701.648 kb on + strand, within B158DRAFT_0701at 701.648 kb on + strand, within B158DRAFT_0701at 701.648 kb on + strand, within B158DRAFT_0701at 701.648 kb on + strand, within B158DRAFT_0701at 701.656 kb on - strand, within B158DRAFT_0701at 701.656 kb on - strand, within B158DRAFT_0701at 701.688 kb on + strand, within B158DRAFT_0701at 701.781 kb on + strand, within B158DRAFT_0701at 701.841 kb on - strand, within B158DRAFT_0701at 701.877 kb on - strand, within B158DRAFT_0701at 702.314 kb on + strand, within B158DRAFT_0702at 702.370 kb on - strand, within B158DRAFT_0702at 702.371 kb on + strand, within B158DRAFT_0702at 702.479 kb on - strand, within B158DRAFT_0702at 702.550 kb on - strand, within B158DRAFT_0702at 702.691 kb on + strandat 702.719 kb on + strandat 702.719 kb on + strandat 702.905 kb on - strand, within B158DRAFT_0703at 702.926 kb on - strand, within B158DRAFT_0703at 702.986 kb on + strand, within B158DRAFT_0703at 702.994 kb on - strand, within B158DRAFT_0703at 702.994 kb on - strand, within B158DRAFT_0703at 703.041 kb on - strand, within B158DRAFT_0703at 703.138 kb on - strand, within B158DRAFT_0703at 703.251 kb on - strand, within B158DRAFT_0703at 703.305 kb on + strand, within B158DRAFT_0703at 703.311 kb on + strand, within B158DRAFT_0703at 703.377 kb on - strand, within B158DRAFT_0703at 703.414 kb on + strand, within B158DRAFT_0703at 703.430 kb on + strand, within B158DRAFT_0703at 703.438 kb on - strand, within B158DRAFT_0703at 703.590 kb on - strand, within B158DRAFT_0703at 703.631 kb on + strand, within B158DRAFT_0703

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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701,139 + B158DRAFT_0700 0.42 -1.0
701,168 - B158DRAFT_0700 0.47 -0.4
701,212 + B158DRAFT_0700 0.53 -0.6
701,212 + B158DRAFT_0700 0.53 -0.4
701,224 + B158DRAFT_0700 0.55 +1.5
701,232 - B158DRAFT_0700 0.56 -1.8
701,232 - B158DRAFT_0700 0.56 -2.1
701,281 + B158DRAFT_0700 0.63 +0.5
701,281 + B158DRAFT_0700 0.63 +0.6
701,289 - B158DRAFT_0700 0.65 -0.3
701,309 + B158DRAFT_0700 0.68 +0.3
701,434 + B158DRAFT_0700 0.86 -1.1
701,463 - +1.2
701,488 - -0.0
701,545 - -2.0
701,648 + B158DRAFT_0701 0.21 -0.1
701,648 + B158DRAFT_0701 0.21 -0.8
701,648 + B158DRAFT_0701 0.21 -1.7
701,648 + B158DRAFT_0701 0.21 -2.1
701,648 + B158DRAFT_0701 0.21 +1.5
701,648 + B158DRAFT_0701 0.21 -0.1
701,656 - B158DRAFT_0701 0.22 -3.0
701,656 - B158DRAFT_0701 0.22 -0.4
701,688 + B158DRAFT_0701 0.28 -1.7
701,781 + B158DRAFT_0701 0.45 -0.9
701,841 - B158DRAFT_0701 0.56 -0.9
701,877 - B158DRAFT_0701 0.62 +0.4
702,314 + B158DRAFT_0702 0.35 -1.4
702,370 - B158DRAFT_0702 0.46 +1.1
702,371 + B158DRAFT_0702 0.46 -1.3
702,479 - B158DRAFT_0702 0.66 -0.4
702,550 - B158DRAFT_0702 0.80 -0.4
702,691 + -2.2
702,719 + -1.1
702,719 + -1.8
702,905 - B158DRAFT_0703 0.14 -0.3
702,926 - B158DRAFT_0703 0.16 +0.1
702,986 + B158DRAFT_0703 0.19 -2.0
702,994 - B158DRAFT_0703 0.20 +0.8
702,994 - B158DRAFT_0703 0.20 -0.6
703,041 - B158DRAFT_0703 0.23 +2.4
703,138 - B158DRAFT_0703 0.29 +0.2
703,251 - B158DRAFT_0703 0.36 -0.1
703,305 + B158DRAFT_0703 0.39 -0.5
703,311 + B158DRAFT_0703 0.40 -0.1
703,377 - B158DRAFT_0703 0.44 +0.1
703,414 + B158DRAFT_0703 0.46 -0.1
703,430 + B158DRAFT_0703 0.47 -0.8
703,438 - B158DRAFT_0703 0.48 +0.5
703,590 - B158DRAFT_0703 0.57 -1.6
703,631 + B158DRAFT_0703 0.60 -2.1

Or see this region's nucleotide sequence