Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0596 and B158DRAFT_0597 overlap by 7 nucleotides B158DRAFT_0597 and B158DRAFT_0598 are separated by 17 nucleotides B158DRAFT_0598 and B158DRAFT_0599 are separated by 123 nucleotides B158DRAFT_0599 and B158DRAFT_0600 are separated by 319 nucleotides
B158DRAFT_0596: B158DRAFT_0596 - RNA polymerase sigma factor, sigma-70 family, at 602,321 to 602,971
_0596
B158DRAFT_0597: B158DRAFT_0597 - hypothetical protein, at 602,965 to 603,207
_0597
B158DRAFT_0598: B158DRAFT_0598 - Beta-barrel assembly machine subunit BamE, at 603,225 to 603,545
_0598
B158DRAFT_0599: B158DRAFT_0599 - Fe2+/Zn2+ uptake regulation proteins, at 603,669 to 604,070
_0599
B158DRAFT_0600: B158DRAFT_0600 - hypothetical protein, at 604,390 to 605,163
_0600
Position (kb) 603
604 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 602.248 kb on + strand at 602.364 kb on + strand at 602.364 kb on + strand at 602.365 kb on + strand at 602.373 kb on - strand at 602.382 kb on + strand at 602.384 kb on + strand at 602.407 kb on + strand, within B158DRAFT_0596 at 602.415 kb on - strand, within B158DRAFT_0596 at 602.415 kb on - strand, within B158DRAFT_0596 at 602.419 kb on + strand, within B158DRAFT_0596 at 602.451 kb on - strand, within B158DRAFT_0596 at 602.499 kb on + strand, within B158DRAFT_0596 at 602.499 kb on + strand, within B158DRAFT_0596 at 602.501 kb on + strand, within B158DRAFT_0596 at 602.507 kb on - strand, within B158DRAFT_0596 at 602.532 kb on + strand, within B158DRAFT_0596 at 602.542 kb on + strand, within B158DRAFT_0596 at 602.552 kb on - strand, within B158DRAFT_0596 at 602.639 kb on + strand, within B158DRAFT_0596 at 602.639 kb on + strand, within B158DRAFT_0596 at 602.639 kb on + strand, within B158DRAFT_0596 at 602.639 kb on + strand, within B158DRAFT_0596 at 602.647 kb on - strand, within B158DRAFT_0596 at 602.699 kb on - strand, within B158DRAFT_0596 at 602.739 kb on - strand, within B158DRAFT_0596 at 602.765 kb on + strand, within B158DRAFT_0596 at 602.786 kb on + strand, within B158DRAFT_0596 at 602.794 kb on - strand, within B158DRAFT_0596 at 602.794 kb on - strand, within B158DRAFT_0596 at 602.804 kb on + strand, within B158DRAFT_0596 at 602.879 kb on - strand, within B158DRAFT_0596 at 602.879 kb on - strand, within B158DRAFT_0596 at 602.980 kb on + strand at 603.013 kb on - strand, within B158DRAFT_0597 at 603.042 kb on + strand, within B158DRAFT_0597 at 603.235 kb on + strand at 603.253 kb on - strand at 603.432 kb on - strand, within B158DRAFT_0598 at 603.697 kb on + strand at 603.718 kb on + strand, within B158DRAFT_0599 at 603.726 kb on - strand, within B158DRAFT_0599 at 603.745 kb on + strand, within B158DRAFT_0599 at 603.764 kb on - strand, within B158DRAFT_0599 at 603.769 kb on - strand, within B158DRAFT_0599 at 603.786 kb on + strand, within B158DRAFT_0599 at 603.866 kb on - strand, within B158DRAFT_0599 at 603.877 kb on + strand, within B158DRAFT_0599 at 603.878 kb on + strand, within B158DRAFT_0599 at 603.886 kb on - strand, within B158DRAFT_0599 at 604.047 kb on - strand at 604.047 kb on - strand at 604.113 kb on + strand at 604.121 kb on - strand at 604.127 kb on - strand at 604.143 kb on + strand at 604.143 kb on - strand at 604.190 kb on + strand at 604.191 kb on + strand at 604.211 kb on - strand at 604.361 kb on + strand at 604.369 kb on - strand at 604.369 kb on - strand at 604.500 kb on - strand, within B158DRAFT_0600
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 602,248 + -0.9 602,364 + -1.1 602,364 + +0.0 602,365 + +0.1 602,373 - +1.0 602,382 + -0.8 602,384 + +0.2 602,407 + B158DRAFT_0596 0.13 +1.2 602,415 - B158DRAFT_0596 0.14 -1.3 602,415 - B158DRAFT_0596 0.14 +0.4 602,419 + B158DRAFT_0596 0.15 -1.7 602,451 - B158DRAFT_0596 0.20 +0.0 602,499 + B158DRAFT_0596 0.27 -1.2 602,499 + B158DRAFT_0596 0.27 -0.3 602,501 + B158DRAFT_0596 0.28 +0.5 602,507 - B158DRAFT_0596 0.29 -1.7 602,532 + B158DRAFT_0596 0.32 -1.8 602,542 + B158DRAFT_0596 0.34 +0.2 602,552 - B158DRAFT_0596 0.35 +0.6 602,639 + B158DRAFT_0596 0.49 -0.9 602,639 + B158DRAFT_0596 0.49 -0.4 602,639 + B158DRAFT_0596 0.49 +0.2 602,639 + B158DRAFT_0596 0.49 -0.9 602,647 - B158DRAFT_0596 0.50 -2.2 602,699 - B158DRAFT_0596 0.58 -0.3 602,739 - B158DRAFT_0596 0.64 -2.1 602,765 + B158DRAFT_0596 0.68 +0.0 602,786 + B158DRAFT_0596 0.71 -1.4 602,794 - B158DRAFT_0596 0.73 -0.7 602,794 - B158DRAFT_0596 0.73 -1.3 602,804 + B158DRAFT_0596 0.74 -0.1 602,879 - B158DRAFT_0596 0.86 -0.8 602,879 - B158DRAFT_0596 0.86 -1.6 602,980 + -1.6 603,013 - B158DRAFT_0597 0.20 +5.3 603,042 + B158DRAFT_0597 0.32 -0.5 603,235 + -0.4 603,253 - -0.0 603,432 - B158DRAFT_0598 0.64 +2.0 603,697 + +2.0 603,718 + B158DRAFT_0599 0.12 -0.3 603,726 - B158DRAFT_0599 0.14 -1.4 603,745 + B158DRAFT_0599 0.19 +0.6 603,764 - B158DRAFT_0599 0.24 -0.7 603,769 - B158DRAFT_0599 0.25 -0.7 603,786 + B158DRAFT_0599 0.29 -0.4 603,866 - B158DRAFT_0599 0.49 -0.9 603,877 + B158DRAFT_0599 0.52 -1.1 603,878 + B158DRAFT_0599 0.52 -1.0 603,886 - B158DRAFT_0599 0.54 +0.3 604,047 - -1.6 604,047 - -0.4 604,113 + -2.3 604,121 - -0.1 604,127 - -0.9 604,143 + +0.3 604,143 - -0.2 604,190 + +0.4 604,191 + +0.3 604,211 - +0.1 604,361 + -0.8 604,369 - -0.0 604,369 - +1.0 604,500 - B158DRAFT_0600 0.14 -0.4
Or see this region's nucleotide sequence