Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0562 and B158DRAFT_0563 are separated by 16 nucleotides B158DRAFT_0563 and B158DRAFT_0564 are separated by 100 nucleotides B158DRAFT_0564 and B158DRAFT_0565 are separated by 165 nucleotides
B158DRAFT_0562: B158DRAFT_0562 - hypothetical protein, at 566,998 to 567,423
_0562
B158DRAFT_0563: B158DRAFT_0563 - hypothetical protein, at 567,440 to 567,931
_0563
B158DRAFT_0564: B158DRAFT_0564 - Acetyltransferases, including N-acetylases of ribosomal proteins, at 568,032 to 568,538
_0564
B158DRAFT_0565: B158DRAFT_0565 - malate dehydrogenase, at 568,704 to 569,681
_0565
Position (kb) 568
569 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 567.061 kb on + strand, within B158DRAFT_0562 at 567.061 kb on + strand, within B158DRAFT_0562 at 567.068 kb on + strand, within B158DRAFT_0562 at 567.069 kb on - strand, within B158DRAFT_0562 at 567.130 kb on - strand, within B158DRAFT_0562 at 567.188 kb on + strand, within B158DRAFT_0562 at 567.188 kb on + strand, within B158DRAFT_0562 at 567.241 kb on + strand, within B158DRAFT_0562 at 567.241 kb on + strand, within B158DRAFT_0562 at 567.249 kb on - strand, within B158DRAFT_0562 at 567.514 kb on + strand, within B158DRAFT_0563 at 567.674 kb on + strand, within B158DRAFT_0563 at 567.733 kb on - strand, within B158DRAFT_0563 at 567.757 kb on - strand, within B158DRAFT_0563 at 567.791 kb on + strand, within B158DRAFT_0563 at 567.791 kb on + strand, within B158DRAFT_0563 at 567.791 kb on + strand, within B158DRAFT_0563 at 567.791 kb on + strand, within B158DRAFT_0563 at 567.791 kb on + strand, within B158DRAFT_0563 at 567.986 kb on + strand at 567.986 kb on + strand at 567.986 kb on + strand at 567.986 kb on + strand at 567.994 kb on - strand at 568.031 kb on - strand at 568.035 kb on + strand at 568.067 kb on + strand at 568.067 kb on + strand at 568.067 kb on + strand at 568.072 kb on - strand at 568.106 kb on + strand, within B158DRAFT_0564 at 568.239 kb on + strand, within B158DRAFT_0564 at 568.246 kb on + strand, within B158DRAFT_0564 at 568.247 kb on - strand, within B158DRAFT_0564 at 568.258 kb on + strand, within B158DRAFT_0564 at 568.292 kb on + strand, within B158DRAFT_0564 at 568.300 kb on - strand, within B158DRAFT_0564 at 568.300 kb on - strand, within B158DRAFT_0564 at 568.467 kb on - strand, within B158DRAFT_0564 at 568.558 kb on + strand at 568.566 kb on - strand at 568.693 kb on + strand at 568.715 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 567,061 + B158DRAFT_0562 0.15 -0.9 567,061 + B158DRAFT_0562 0.15 -0.5 567,068 + B158DRAFT_0562 0.16 -1.5 567,069 - B158DRAFT_0562 0.17 -0.4 567,130 - B158DRAFT_0562 0.31 +1.9 567,188 + B158DRAFT_0562 0.45 +0.1 567,188 + B158DRAFT_0562 0.45 -0.3 567,241 + B158DRAFT_0562 0.57 -0.4 567,241 + B158DRAFT_0562 0.57 -1.1 567,249 - B158DRAFT_0562 0.59 +0.2 567,514 + B158DRAFT_0563 0.15 -0.8 567,674 + B158DRAFT_0563 0.48 -0.3 567,733 - B158DRAFT_0563 0.60 -1.1 567,757 - B158DRAFT_0563 0.64 -0.1 567,791 + B158DRAFT_0563 0.71 +0.9 567,791 + B158DRAFT_0563 0.71 -1.9 567,791 + B158DRAFT_0563 0.71 -2.5 567,791 + B158DRAFT_0563 0.71 +6.4 567,791 + B158DRAFT_0563 0.71 -0.4 567,986 + +6.7 567,986 + +0.6 567,986 + -1.3 567,986 + +0.9 567,994 - +0.4 568,031 - -0.7 568,035 + -1.5 568,067 + +0.0 568,067 + -0.1 568,067 + -1.5 568,072 - +0.1 568,106 + B158DRAFT_0564 0.15 -0.0 568,239 + B158DRAFT_0564 0.41 -1.6 568,246 + B158DRAFT_0564 0.42 -1.5 568,247 - B158DRAFT_0564 0.42 -0.2 568,258 + B158DRAFT_0564 0.45 -0.6 568,292 + B158DRAFT_0564 0.51 -1.5 568,300 - B158DRAFT_0564 0.53 +0.1 568,300 - B158DRAFT_0564 0.53 -2.9 568,467 - B158DRAFT_0564 0.86 -2.4 568,558 + -0.6 568,566 - +0.3 568,693 + +0.8 568,715 - +0.2
Or see this region's nucleotide sequence