Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0374

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0373 and B158DRAFT_0374 are separated by 15 nucleotidesB158DRAFT_0374 and B158DRAFT_0375 are separated by 240 nucleotides B158DRAFT_0373: B158DRAFT_0373 - tRNA modification GTPase TrmE, at 377,042 to 378,400 _0373 B158DRAFT_0374: B158DRAFT_0374 - Glycosyltransferases, probably involved in cell wall biogenesis, at 378,416 to 379,780 _0374 B158DRAFT_0375: B158DRAFT_0375 - hypothetical protein, at 380,021 to 381,292 _0375 Position (kb) 378 379 380Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 377.453 kb on - strand, within B158DRAFT_0373at 377.602 kb on + strand, within B158DRAFT_0373at 377.683 kb on + strand, within B158DRAFT_0373at 377.684 kb on + strand, within B158DRAFT_0373at 377.685 kb on + strand, within B158DRAFT_0373at 377.693 kb on - strand, within B158DRAFT_0373at 377.693 kb on - strand, within B158DRAFT_0373at 377.718 kb on - strand, within B158DRAFT_0373at 377.724 kb on + strand, within B158DRAFT_0373at 377.734 kb on + strand, within B158DRAFT_0373at 377.750 kb on + strand, within B158DRAFT_0373at 377.750 kb on + strand, within B158DRAFT_0373at 377.758 kb on - strand, within B158DRAFT_0373at 377.758 kb on - strand, within B158DRAFT_0373at 377.758 kb on - strand, within B158DRAFT_0373at 378.134 kb on - strand, within B158DRAFT_0373at 378.163 kb on - strand, within B158DRAFT_0373at 378.231 kb on + strand, within B158DRAFT_0373at 378.422 kb on + strandat 378.430 kb on - strandat 378.456 kb on - strandat 378.515 kb on - strandat 378.683 kb on + strand, within B158DRAFT_0374at 378.683 kb on + strand, within B158DRAFT_0374at 378.708 kb on + strand, within B158DRAFT_0374at 378.708 kb on + strand, within B158DRAFT_0374at 378.708 kb on + strand, within B158DRAFT_0374at 378.721 kb on - strand, within B158DRAFT_0374at 378.846 kb on - strand, within B158DRAFT_0374at 378.862 kb on + strand, within B158DRAFT_0374at 378.911 kb on - strand, within B158DRAFT_0374at 378.911 kb on - strand, within B158DRAFT_0374at 379.002 kb on - strand, within B158DRAFT_0374at 379.018 kb on + strand, within B158DRAFT_0374at 379.023 kb on + strand, within B158DRAFT_0374at 379.036 kb on - strand, within B158DRAFT_0374at 379.050 kb on + strand, within B158DRAFT_0374at 379.065 kb on + strand, within B158DRAFT_0374at 379.065 kb on + strand, within B158DRAFT_0374at 379.065 kb on + strand, within B158DRAFT_0374at 379.065 kb on + strand, within B158DRAFT_0374at 379.120 kb on + strand, within B158DRAFT_0374at 379.120 kb on + strand, within B158DRAFT_0374at 379.128 kb on - strand, within B158DRAFT_0374at 379.130 kb on + strand, within B158DRAFT_0374at 379.280 kb on + strand, within B158DRAFT_0374at 379.287 kb on - strand, within B158DRAFT_0374at 379.307 kb on - strand, within B158DRAFT_0374at 379.326 kb on + strand, within B158DRAFT_0374at 379.435 kb on + strand, within B158DRAFT_0374at 379.435 kb on + strand, within B158DRAFT_0374at 379.443 kb on - strand, within B158DRAFT_0374at 379.455 kb on + strand, within B158DRAFT_0374at 379.455 kb on + strand, within B158DRAFT_0374at 379.455 kb on + strand, within B158DRAFT_0374at 379.457 kb on + strand, within B158DRAFT_0374at 379.462 kb on + strand, within B158DRAFT_0374at 379.465 kb on - strand, within B158DRAFT_0374at 379.493 kb on - strand, within B158DRAFT_0374at 379.517 kb on - strand, within B158DRAFT_0374at 379.517 kb on - strand, within B158DRAFT_0374at 379.517 kb on - strand, within B158DRAFT_0374at 379.526 kb on - strand, within B158DRAFT_0374at 379.533 kb on - strand, within B158DRAFT_0374at 379.545 kb on + strand, within B158DRAFT_0374at 379.572 kb on - strand, within B158DRAFT_0374at 379.676 kb on - strandat 379.720 kb on + strandat 379.720 kb on + strandat 379.720 kb on + strandat 379.720 kb on + strandat 379.720 kb on + strandat 379.728 kb on - strandat 379.728 kb on - strandat 379.741 kb on + strandat 379.846 kb on + strandat 379.854 kb on - strandat 379.856 kb on + strandat 379.856 kb on + strandat 379.864 kb on - strandat 379.899 kb on - strandat 379.919 kb on - strandat 380.017 kb on - strandat 380.047 kb on + strandat 380.055 kb on - strandat 380.100 kb on + strandat 380.105 kb on + strandat 380.127 kb on + strandat 380.134 kb on + strandat 380.238 kb on + strand, within B158DRAFT_0375at 380.238 kb on + strand, within B158DRAFT_0375at 380.238 kb on + strand, within B158DRAFT_0375at 380.238 kb on + strand, within B158DRAFT_0375at 380.238 kb on + strand, within B158DRAFT_0375at 380.238 kb on + strand, within B158DRAFT_0375at 380.238 kb on + strand, within B158DRAFT_0375at 380.245 kb on - strand, within B158DRAFT_0375at 380.246 kb on - strand, within B158DRAFT_0375at 380.246 kb on - strand, within B158DRAFT_0375at 380.246 kb on - strand, within B158DRAFT_0375at 380.246 kb on - strand, within B158DRAFT_0375at 380.246 kb on - strand, within B158DRAFT_0375at 380.246 kb on - strand, within B158DRAFT_0375at 380.246 kb on - strand, within B158DRAFT_0375at 380.282 kb on - strand, within B158DRAFT_0375at 380.310 kb on + strand, within B158DRAFT_0375at 380.457 kb on - strand, within B158DRAFT_0375at 380.603 kb on - strand, within B158DRAFT_0375at 380.693 kb on - strand, within B158DRAFT_0375

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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377,453 - B158DRAFT_0373 0.30 +2.7
377,602 + B158DRAFT_0373 0.41 +4.5
377,683 + B158DRAFT_0373 0.47 +6.6
377,684 + B158DRAFT_0373 0.47 +4.3
377,685 + B158DRAFT_0373 0.47 +5.6
377,693 - B158DRAFT_0373 0.48 +6.4
377,693 - B158DRAFT_0373 0.48 +6.5
377,718 - B158DRAFT_0373 0.50 +5.6
377,724 + B158DRAFT_0373 0.50 +5.3
377,734 + B158DRAFT_0373 0.51 +5.0
377,750 + B158DRAFT_0373 0.52 +5.7
377,750 + B158DRAFT_0373 0.52 +4.8
377,758 - B158DRAFT_0373 0.53 +5.3
377,758 - B158DRAFT_0373 0.53 +4.8
377,758 - B158DRAFT_0373 0.53 +5.5
378,134 - B158DRAFT_0373 0.80 +5.4
378,163 - B158DRAFT_0373 0.82 +5.3
378,231 + B158DRAFT_0373 0.87 +5.4
378,422 + -1.3
378,430 - +0.5
378,456 - +0.6
378,515 - +0.4
378,683 + B158DRAFT_0374 0.20 -1.8
378,683 + B158DRAFT_0374 0.20 -0.9
378,708 + B158DRAFT_0374 0.21 -0.4
378,708 + B158DRAFT_0374 0.21 -0.4
378,708 + B158DRAFT_0374 0.21 -1.4
378,721 - B158DRAFT_0374 0.22 -0.4
378,846 - B158DRAFT_0374 0.32 -1.1
378,862 + B158DRAFT_0374 0.33 +0.8
378,911 - B158DRAFT_0374 0.36 +2.0
378,911 - B158DRAFT_0374 0.36 -0.2
379,002 - B158DRAFT_0374 0.43 -1.2
379,018 + B158DRAFT_0374 0.44 -0.1
379,023 + B158DRAFT_0374 0.44 -0.3
379,036 - B158DRAFT_0374 0.45 -0.8
379,050 + B158DRAFT_0374 0.46 +0.9
379,065 + B158DRAFT_0374 0.48 -0.2
379,065 + B158DRAFT_0374 0.48 -2.0
379,065 + B158DRAFT_0374 0.48 +0.6
379,065 + B158DRAFT_0374 0.48 -0.7
379,120 + B158DRAFT_0374 0.52 -1.4
379,120 + B158DRAFT_0374 0.52 -2.3
379,128 - B158DRAFT_0374 0.52 +5.2
379,130 + B158DRAFT_0374 0.52 -0.3
379,280 + B158DRAFT_0374 0.63 +0.9
379,287 - B158DRAFT_0374 0.64 +0.3
379,307 - B158DRAFT_0374 0.65 -0.8
379,326 + B158DRAFT_0374 0.67 -0.6
379,435 + B158DRAFT_0374 0.75 +1.1
379,435 + B158DRAFT_0374 0.75 -0.9
379,443 - B158DRAFT_0374 0.75 -0.1
379,455 + B158DRAFT_0374 0.76 -0.2
379,455 + B158DRAFT_0374 0.76 +0.2
379,455 + B158DRAFT_0374 0.76 -0.4
379,457 + B158DRAFT_0374 0.76 -1.4
379,462 + B158DRAFT_0374 0.77 +2.5
379,465 - B158DRAFT_0374 0.77 -1.5
379,493 - B158DRAFT_0374 0.79 +0.1
379,517 - B158DRAFT_0374 0.81 -0.6
379,517 - B158DRAFT_0374 0.81 -1.1
379,517 - B158DRAFT_0374 0.81 +2.1
379,526 - B158DRAFT_0374 0.81 -0.2
379,533 - B158DRAFT_0374 0.82 +0.0
379,545 + B158DRAFT_0374 0.83 -1.1
379,572 - B158DRAFT_0374 0.85 -1.5
379,676 - -2.6
379,720 + -2.6
379,720 + +0.2
379,720 + -0.8
379,720 + -1.5
379,720 + -1.1
379,728 - +0.2
379,728 - -0.1
379,741 + -1.7
379,846 + +0.2
379,854 - -2.0
379,856 + -0.7
379,856 + +0.5
379,864 - -0.2
379,899 - -0.8
379,919 - -2.1
380,017 - +4.7
380,047 + -0.2
380,055 - +1.0
380,100 + +0.7
380,105 + -1.3
380,127 + -0.4
380,134 + +0.5
380,238 + B158DRAFT_0375 0.17 -0.9
380,238 + B158DRAFT_0375 0.17 +0.6
380,238 + B158DRAFT_0375 0.17 +0.0
380,238 + B158DRAFT_0375 0.17 +1.4
380,238 + B158DRAFT_0375 0.17 +0.5
380,238 + B158DRAFT_0375 0.17 +0.6
380,238 + B158DRAFT_0375 0.17 +0.2
380,245 - B158DRAFT_0375 0.18 +0.9
380,246 - B158DRAFT_0375 0.18 -1.0
380,246 - B158DRAFT_0375 0.18 +0.7
380,246 - B158DRAFT_0375 0.18 +0.3
380,246 - B158DRAFT_0375 0.18 +0.1
380,246 - B158DRAFT_0375 0.18 -0.1
380,246 - B158DRAFT_0375 0.18 +2.9
380,246 - B158DRAFT_0375 0.18 +0.2
380,282 - B158DRAFT_0375 0.21 +0.5
380,310 + B158DRAFT_0375 0.23 +0.6
380,457 - B158DRAFT_0375 0.34 -2.1
380,603 - B158DRAFT_0375 0.46 -0.8
380,693 - B158DRAFT_0375 0.53 -0.3

Or see this region's nucleotide sequence