Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0352 and B158DRAFT_0353 are separated by 6 nucleotides B158DRAFT_0353 and B158DRAFT_0354 are separated by 132 nucleotides B158DRAFT_0354 and B158DRAFT_0355 are separated by 72 nucleotides
B158DRAFT_0352: B158DRAFT_0352 - ATP-dependent DNA helicase Rep (EC 3.6.1.-), at 353,470 to 355,536
_0352
B158DRAFT_0353: B158DRAFT_0353 - Lactoylglutathione lyase and related lyases, at 355,543 to 355,935
_0353
B158DRAFT_0354: B158DRAFT_0354 - hypothetical protein, at 356,068 to 356,211
_0354
B158DRAFT_0355: B158DRAFT_0355 - fatty oxidation complex, beta subunit FadA, at 356,284 to 357,453
_0355
Position (kb) 355
356 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6
7 at 354.586 kb on + strand, within B158DRAFT_0352 at 354.605 kb on + strand, within B158DRAFT_0352 at 354.678 kb on + strand, within B158DRAFT_0352 at 354.686 kb on - strand, within B158DRAFT_0352 at 354.702 kb on + strand, within B158DRAFT_0352 at 354.702 kb on + strand, within B158DRAFT_0352 at 354.702 kb on + strand, within B158DRAFT_0352 at 354.746 kb on - strand, within B158DRAFT_0352 at 354.758 kb on + strand, within B158DRAFT_0352 at 354.758 kb on + strand, within B158DRAFT_0352 at 354.773 kb on + strand, within B158DRAFT_0352 at 354.773 kb on + strand, within B158DRAFT_0352 at 354.773 kb on + strand, within B158DRAFT_0352 at 354.781 kb on - strand, within B158DRAFT_0352 at 354.781 kb on - strand, within B158DRAFT_0352 at 354.781 kb on - strand, within B158DRAFT_0352 at 354.842 kb on + strand, within B158DRAFT_0352 at 354.861 kb on + strand, within B158DRAFT_0352 at 354.861 kb on + strand, within B158DRAFT_0352 at 354.861 kb on + strand, within B158DRAFT_0352 at 354.861 kb on + strand, within B158DRAFT_0352 at 354.861 kb on + strand, within B158DRAFT_0352 at 354.861 kb on + strand, within B158DRAFT_0352 at 354.861 kb on + strand, within B158DRAFT_0352 at 354.861 kb on + strand, within B158DRAFT_0352 at 354.863 kb on - strand, within B158DRAFT_0352 at 354.869 kb on - strand, within B158DRAFT_0352 at 354.869 kb on - strand, within B158DRAFT_0352 at 354.869 kb on - strand, within B158DRAFT_0352 at 354.869 kb on - strand, within B158DRAFT_0352 at 354.869 kb on - strand, within B158DRAFT_0352 at 354.869 kb on - strand, within B158DRAFT_0352 at 354.923 kb on - strand, within B158DRAFT_0352 at 354.928 kb on - strand, within B158DRAFT_0352 at 354.938 kb on + strand, within B158DRAFT_0352 at 354.946 kb on - strand, within B158DRAFT_0352 at 354.946 kb on - strand, within B158DRAFT_0352 at 354.957 kb on - strand, within B158DRAFT_0352 at 354.957 kb on - strand, within B158DRAFT_0352 at 355.015 kb on + strand, within B158DRAFT_0352 at 355.048 kb on + strand, within B158DRAFT_0352 at 355.078 kb on - strand, within B158DRAFT_0352 at 355.092 kb on + strand, within B158DRAFT_0352 at 355.123 kb on - strand, within B158DRAFT_0352 at 355.349 kb on + strand at 355.386 kb on + strand at 355.395 kb on - strand at 355.395 kb on - strand at 355.572 kb on - strand at 355.609 kb on - strand, within B158DRAFT_0353 at 355.727 kb on + strand, within B158DRAFT_0353 at 355.727 kb on + strand, within B158DRAFT_0353 at 355.769 kb on - strand, within B158DRAFT_0353 at 355.831 kb on - strand, within B158DRAFT_0353 at 355.845 kb on + strand, within B158DRAFT_0353 at 355.853 kb on - strand, within B158DRAFT_0353 at 355.922 kb on + strand at 355.959 kb on + strand at 355.959 kb on + strand at 355.967 kb on - strand at 355.979 kb on + strand at 356.061 kb on - strand at 356.327 kb on + strand at 356.431 kb on + strand, within B158DRAFT_0355 at 356.433 kb on + strand, within B158DRAFT_0355 at 356.438 kb on - strand, within B158DRAFT_0355 at 356.491 kb on + strand, within B158DRAFT_0355 at 356.599 kb on - strand, within B158DRAFT_0355 at 356.672 kb on - strand, within B158DRAFT_0355 at 356.704 kb on - strand, within B158DRAFT_0355 at 356.923 kb on - strand, within B158DRAFT_0355
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 354,586 + B158DRAFT_0352 0.54 +5.9 354,605 + B158DRAFT_0352 0.55 +5.9 354,678 + B158DRAFT_0352 0.58 +6.1 354,686 - B158DRAFT_0352 0.59 +5.5 354,702 + B158DRAFT_0352 0.60 +6.8 354,702 + B158DRAFT_0352 0.60 +5.5 354,702 + B158DRAFT_0352 0.60 +5.0 354,746 - B158DRAFT_0352 0.62 +6.0 354,758 + B158DRAFT_0352 0.62 +6.6 354,758 + B158DRAFT_0352 0.62 +6.7 354,773 + B158DRAFT_0352 0.63 +5.5 354,773 + B158DRAFT_0352 0.63 +6.3 354,773 + B158DRAFT_0352 0.63 +6.3 354,781 - B158DRAFT_0352 0.63 +6.0 354,781 - B158DRAFT_0352 0.63 +6.1 354,781 - B158DRAFT_0352 0.63 +5.6 354,842 + B158DRAFT_0352 0.66 +5.7 354,861 + B158DRAFT_0352 0.67 +5.5 354,861 + B158DRAFT_0352 0.67 +5.9 354,861 + B158DRAFT_0352 0.67 +6.2 354,861 + B158DRAFT_0352 0.67 +6.0 354,861 + B158DRAFT_0352 0.67 +6.2 354,861 + B158DRAFT_0352 0.67 +5.5 354,861 + B158DRAFT_0352 0.67 +4.7 354,861 + B158DRAFT_0352 0.67 +7.1 354,863 - B158DRAFT_0352 0.67 +6.0 354,869 - B158DRAFT_0352 0.68 +5.8 354,869 - B158DRAFT_0352 0.68 +5.9 354,869 - B158DRAFT_0352 0.68 +6.4 354,869 - B158DRAFT_0352 0.68 +5.5 354,869 - B158DRAFT_0352 0.68 +5.6 354,869 - B158DRAFT_0352 0.68 +5.9 354,923 - B158DRAFT_0352 0.70 +5.3 354,928 - B158DRAFT_0352 0.71 +6.4 354,938 + B158DRAFT_0352 0.71 +5.1 354,946 - B158DRAFT_0352 0.71 +6.0 354,946 - B158DRAFT_0352 0.71 +5.8 354,957 - B158DRAFT_0352 0.72 +5.6 354,957 - B158DRAFT_0352 0.72 +6.5 355,015 + B158DRAFT_0352 0.75 +6.3 355,048 + B158DRAFT_0352 0.76 +6.0 355,078 - B158DRAFT_0352 0.78 +5.1 355,092 + B158DRAFT_0352 0.78 +5.0 355,123 - B158DRAFT_0352 0.80 +4.3 355,349 + +6.1 355,386 + +5.7 355,395 - +5.4 355,395 - +6.1 355,572 - -2.5 355,609 - B158DRAFT_0353 0.17 -0.1 355,727 + B158DRAFT_0353 0.47 -0.7 355,727 + B158DRAFT_0353 0.47 -0.7 355,769 - B158DRAFT_0353 0.58 +1.3 355,831 - B158DRAFT_0353 0.73 +0.5 355,845 + B158DRAFT_0353 0.77 +2.2 355,853 - B158DRAFT_0353 0.79 +0.7 355,922 + +2.8 355,959 + -2.5 355,959 + +0.5 355,967 - +1.3 355,979 + +0.9 356,061 - -0.5 356,327 + +0.8 356,431 + B158DRAFT_0355 0.13 +2.4 356,433 + B158DRAFT_0355 0.13 +1.0 356,438 - B158DRAFT_0355 0.13 -1.7 356,491 + B158DRAFT_0355 0.18 -0.7 356,599 - B158DRAFT_0355 0.27 -0.9 356,672 - B158DRAFT_0355 0.33 +0.5 356,704 - B158DRAFT_0355 0.36 -0.1 356,923 - B158DRAFT_0355 0.55 -0.8
Or see this region's nucleotide sequence