Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0325 and B158DRAFT_0326 are separated by 338 nucleotides B158DRAFT_0326 and B158DRAFT_0327 are separated by 34 nucleotides B158DRAFT_0327 and B158DRAFT_0328 are separated by 109 nucleotides B158DRAFT_0328 and B158DRAFT_0329 are separated by 26 nucleotides
B158DRAFT_0325: B158DRAFT_0325 - transcriptional regulator, LytTR family, at 329,535 to 330,401
_0325
B158DRAFT_0326: B158DRAFT_0326 - Outer membrane protein V, at 330,740 to 331,567
_0326
B158DRAFT_0327: B158DRAFT_0327 - hypothetical protein, at 331,602 to 331,895
_0327
B158DRAFT_0328: B158DRAFT_0328 - hypothetical protein, at 332,005 to 332,334
_0328
B158DRAFT_0329: B158DRAFT_0329 - Glutathione S-transferase, at 332,361 to 332,990
_0329
Position (kb) 330
331
332 Strain fitness (log2 ratio) -2
-1
0
1
2 at 330.083 kb on - strand, within B158DRAFT_0325 at 330.138 kb on - strand, within B158DRAFT_0325 at 330.228 kb on - strand, within B158DRAFT_0325 at 330.228 kb on - strand, within B158DRAFT_0325 at 330.256 kb on + strand, within B158DRAFT_0325 at 330.279 kb on - strand, within B158DRAFT_0325 at 330.341 kb on - strand at 330.435 kb on - strand at 330.505 kb on + strand at 330.808 kb on - strand at 331.058 kb on + strand, within B158DRAFT_0326 at 331.058 kb on + strand, within B158DRAFT_0326 at 331.066 kb on - strand, within B158DRAFT_0326 at 331.066 kb on - strand, within B158DRAFT_0326 at 331.066 kb on - strand, within B158DRAFT_0326 at 331.347 kb on + strand, within B158DRAFT_0326 at 331.347 kb on + strand, within B158DRAFT_0326 at 331.347 kb on + strand, within B158DRAFT_0326 at 331.347 kb on + strand, within B158DRAFT_0326 at 331.347 kb on + strand, within B158DRAFT_0326 at 331.355 kb on - strand, within B158DRAFT_0326 at 331.355 kb on - strand, within B158DRAFT_0326 at 331.355 kb on - strand, within B158DRAFT_0326 at 331.355 kb on - strand, within B158DRAFT_0326 at 331.355 kb on - strand, within B158DRAFT_0326 at 331.355 kb on - strand, within B158DRAFT_0326 at 331.355 kb on - strand, within B158DRAFT_0326 at 331.355 kb on - strand, within B158DRAFT_0326 at 331.355 kb on - strand, within B158DRAFT_0326 at 331.355 kb on - strand, within B158DRAFT_0326 at 331.355 kb on - strand, within B158DRAFT_0326 at 331.355 kb on - strand, within B158DRAFT_0326 at 331.360 kb on - strand, within B158DRAFT_0326 at 332.110 kb on + strand, within B158DRAFT_0328 at 332.118 kb on - strand, within B158DRAFT_0328 at 332.207 kb on - strand, within B158DRAFT_0328 at 332.499 kb on + strand, within B158DRAFT_0329 at 332.499 kb on + strand, within B158DRAFT_0329 at 332.501 kb on - strand, within B158DRAFT_0329 at 332.501 kb on - strand, within B158DRAFT_0329 at 332.507 kb on - strand, within B158DRAFT_0329
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 330,083 - B158DRAFT_0325 0.63 -2.6 330,138 - B158DRAFT_0325 0.70 -0.3 330,228 - B158DRAFT_0325 0.80 -0.6 330,228 - B158DRAFT_0325 0.80 -1.1 330,256 + B158DRAFT_0325 0.83 -0.0 330,279 - B158DRAFT_0325 0.86 +0.2 330,341 - -0.1 330,435 - -0.4 330,505 + -0.1 330,808 - -1.5 331,058 + B158DRAFT_0326 0.38 -0.8 331,058 + B158DRAFT_0326 0.38 -0.2 331,066 - B158DRAFT_0326 0.39 -0.8 331,066 - B158DRAFT_0326 0.39 -1.0 331,066 - B158DRAFT_0326 0.39 -1.2 331,347 + B158DRAFT_0326 0.73 +1.2 331,347 + B158DRAFT_0326 0.73 +0.1 331,347 + B158DRAFT_0326 0.73 -0.1 331,347 + B158DRAFT_0326 0.73 -0.4 331,347 + B158DRAFT_0326 0.73 -1.3 331,355 - B158DRAFT_0326 0.74 -0.5 331,355 - B158DRAFT_0326 0.74 +2.0 331,355 - B158DRAFT_0326 0.74 -1.6 331,355 - B158DRAFT_0326 0.74 -0.0 331,355 - B158DRAFT_0326 0.74 +0.2 331,355 - B158DRAFT_0326 0.74 +1.6 331,355 - B158DRAFT_0326 0.74 -0.5 331,355 - B158DRAFT_0326 0.74 -2.5 331,355 - B158DRAFT_0326 0.74 -0.6 331,355 - B158DRAFT_0326 0.74 -0.1 331,355 - B158DRAFT_0326 0.74 -1.0 331,355 - B158DRAFT_0326 0.74 -1.2 331,360 - B158DRAFT_0326 0.75 -1.8 332,110 + B158DRAFT_0328 0.32 +0.5 332,118 - B158DRAFT_0328 0.34 +0.2 332,207 - B158DRAFT_0328 0.61 -2.7 332,499 + B158DRAFT_0329 0.22 +0.3 332,499 + B158DRAFT_0329 0.22 +1.6 332,501 - B158DRAFT_0329 0.22 +1.5 332,501 - B158DRAFT_0329 0.22 -0.6 332,507 - B158DRAFT_0329 0.23 -1.3
Or see this region's nucleotide sequence