Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0298 and B158DRAFT_0299 are separated by 146 nucleotides B158DRAFT_0299 and B158DRAFT_0300 are separated by 23 nucleotides
B158DRAFT_0298: B158DRAFT_0298 - Cysteine synthase, at 301,300 to 302,352
_0298
B158DRAFT_0299: B158DRAFT_0299 - Predicted proline hydroxylase, at 302,499 to 303,155
_0299
B158DRAFT_0300: B158DRAFT_0300 - diguanylate cyclase (GGDEF) domain, at 303,179 to 305,236
_0300
Position (kb) 302
303
304 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 301.529 kb on + strand, within B158DRAFT_0298 at 301.532 kb on - strand, within B158DRAFT_0298 at 301.537 kb on + strand, within B158DRAFT_0298 at 301.603 kb on + strand, within B158DRAFT_0298 at 301.611 kb on - strand, within B158DRAFT_0298 at 301.681 kb on + strand, within B158DRAFT_0298 at 301.681 kb on + strand, within B158DRAFT_0298 at 301.681 kb on + strand, within B158DRAFT_0298 at 301.688 kb on + strand, within B158DRAFT_0298 at 301.689 kb on - strand, within B158DRAFT_0298 at 301.689 kb on - strand, within B158DRAFT_0298 at 301.689 kb on - strand, within B158DRAFT_0298 at 301.689 kb on - strand, within B158DRAFT_0298 at 301.689 kb on - strand, within B158DRAFT_0298 at 301.689 kb on - strand, within B158DRAFT_0298 at 301.689 kb on - strand, within B158DRAFT_0298 at 301.722 kb on + strand, within B158DRAFT_0298 at 301.740 kb on + strand, within B158DRAFT_0298 at 301.748 kb on - strand, within B158DRAFT_0298 at 301.753 kb on - strand, within B158DRAFT_0298 at 301.753 kb on - strand, within B158DRAFT_0298 at 301.758 kb on + strand, within B158DRAFT_0298 at 301.758 kb on - strand, within B158DRAFT_0298 at 301.758 kb on - strand, within B158DRAFT_0298 at 301.758 kb on - strand, within B158DRAFT_0298 at 301.758 kb on - strand, within B158DRAFT_0298 at 301.773 kb on + strand, within B158DRAFT_0298 at 301.801 kb on + strand, within B158DRAFT_0298 at 301.813 kb on + strand, within B158DRAFT_0298 at 301.813 kb on + strand, within B158DRAFT_0298 at 301.819 kb on - strand, within B158DRAFT_0298 at 301.825 kb on + strand, within B158DRAFT_0298 at 301.838 kb on + strand, within B158DRAFT_0298 at 301.838 kb on + strand, within B158DRAFT_0298 at 301.838 kb on + strand, within B158DRAFT_0298 at 301.838 kb on + strand, within B158DRAFT_0298 at 301.838 kb on + strand, within B158DRAFT_0298 at 301.838 kb on + strand, within B158DRAFT_0298 at 301.838 kb on + strand, within B158DRAFT_0298 at 301.846 kb on - strand, within B158DRAFT_0298 at 301.846 kb on - strand, within B158DRAFT_0298 at 301.846 kb on - strand, within B158DRAFT_0298 at 301.846 kb on - strand, within B158DRAFT_0298 at 301.846 kb on - strand, within B158DRAFT_0298 at 301.846 kb on - strand, within B158DRAFT_0298 at 301.856 kb on - strand, within B158DRAFT_0298 at 301.868 kb on + strand, within B158DRAFT_0298 at 302.002 kb on - strand, within B158DRAFT_0298 at 302.002 kb on - strand, within B158DRAFT_0298 at 302.002 kb on - strand, within B158DRAFT_0298 at 302.003 kb on - strand, within B158DRAFT_0298 at 302.011 kb on + strand, within B158DRAFT_0298 at 302.016 kb on + strand, within B158DRAFT_0298 at 302.016 kb on + strand, within B158DRAFT_0298 at 302.019 kb on - strand, within B158DRAFT_0298 at 302.019 kb on - strand, within B158DRAFT_0298 at 302.092 kb on + strand, within B158DRAFT_0298 at 302.120 kb on - strand, within B158DRAFT_0298 at 302.139 kb on - strand, within B158DRAFT_0298 at 302.175 kb on + strand, within B158DRAFT_0298 at 302.183 kb on - strand, within B158DRAFT_0298 at 302.354 kb on + strand at 302.396 kb on - strand at 302.412 kb on - strand at 302.496 kb on + strand at 302.504 kb on - strand at 302.504 kb on - strand at 302.504 kb on - strand at 302.586 kb on + strand, within B158DRAFT_0299 at 302.591 kb on + strand, within B158DRAFT_0299 at 302.591 kb on + strand, within B158DRAFT_0299 at 302.594 kb on - strand, within B158DRAFT_0299 at 302.599 kb on - strand, within B158DRAFT_0299 at 302.599 kb on - strand, within B158DRAFT_0299 at 302.599 kb on - strand, within B158DRAFT_0299 at 302.599 kb on - strand, within B158DRAFT_0299 at 302.750 kb on - strand, within B158DRAFT_0299 at 302.758 kb on - strand, within B158DRAFT_0299 at 302.758 kb on - strand, within B158DRAFT_0299 at 302.811 kb on + strand, within B158DRAFT_0299 at 302.885 kb on + strand, within B158DRAFT_0299 at 302.925 kb on - strand, within B158DRAFT_0299 at 302.977 kb on + strand, within B158DRAFT_0299 at 302.985 kb on - strand, within B158DRAFT_0299 at 303.038 kb on + strand, within B158DRAFT_0299 at 303.071 kb on + strand, within B158DRAFT_0299 at 303.193 kb on - strand at 303.297 kb on - strand at 303.409 kb on - strand, within B158DRAFT_0300 at 303.440 kb on - strand, within B158DRAFT_0300 at 303.660 kb on + strand, within B158DRAFT_0300 at 303.660 kb on + strand, within B158DRAFT_0300 at 303.668 kb on - strand, within B158DRAFT_0300 at 303.668 kb on - strand, within B158DRAFT_0300 at 303.673 kb on - strand, within B158DRAFT_0300 at 303.745 kb on + strand, within B158DRAFT_0300 at 303.814 kb on + strand, within B158DRAFT_0300 at 303.874 kb on + strand, within B158DRAFT_0300 at 303.980 kb on - strand, within B158DRAFT_0300 at 303.981 kb on + strand, within B158DRAFT_0300 at 303.987 kb on + strand, within B158DRAFT_0300 at 304.089 kb on + strand, within B158DRAFT_0300 at 304.097 kb on - strand, within B158DRAFT_0300 at 304.097 kb on - strand, within B158DRAFT_0300 at 304.097 kb on - strand, within B158DRAFT_0300 at 304.099 kb on + strand, within B158DRAFT_0300 at 304.107 kb on - strand, within B158DRAFT_0300 at 304.112 kb on - strand, within B158DRAFT_0300 at 304.145 kb on + strand, within B158DRAFT_0300
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 301,529 + B158DRAFT_0298 0.22 +0.2 301,532 - B158DRAFT_0298 0.22 -0.1 301,537 + B158DRAFT_0298 0.23 +0.6 301,603 + B158DRAFT_0298 0.29 -0.4 301,611 - B158DRAFT_0298 0.30 +1.1 301,681 + B158DRAFT_0298 0.36 -0.7 301,681 + B158DRAFT_0298 0.36 +1.2 301,681 + B158DRAFT_0298 0.36 -1.6 301,688 + B158DRAFT_0298 0.37 -0.6 301,689 - B158DRAFT_0298 0.37 -1.3 301,689 - B158DRAFT_0298 0.37 -1.1 301,689 - B158DRAFT_0298 0.37 +0.4 301,689 - B158DRAFT_0298 0.37 -2.1 301,689 - B158DRAFT_0298 0.37 -2.9 301,689 - B158DRAFT_0298 0.37 -1.1 301,689 - B158DRAFT_0298 0.37 -0.3 301,722 + B158DRAFT_0298 0.40 -0.4 301,740 + B158DRAFT_0298 0.42 -0.4 301,748 - B158DRAFT_0298 0.43 +1.3 301,753 - B158DRAFT_0298 0.43 -0.1 301,753 - B158DRAFT_0298 0.43 -0.7 301,758 + B158DRAFT_0298 0.43 -2.5 301,758 - B158DRAFT_0298 0.43 -1.7 301,758 - B158DRAFT_0298 0.43 +0.1 301,758 - B158DRAFT_0298 0.43 +0.9 301,758 - B158DRAFT_0298 0.43 -0.9 301,773 + B158DRAFT_0298 0.45 -1.7 301,801 + B158DRAFT_0298 0.48 -0.7 301,813 + B158DRAFT_0298 0.49 +0.7 301,813 + B158DRAFT_0298 0.49 -0.3 301,819 - B158DRAFT_0298 0.49 -0.4 301,825 + B158DRAFT_0298 0.50 -1.6 301,838 + B158DRAFT_0298 0.51 -1.0 301,838 + B158DRAFT_0298 0.51 -0.3 301,838 + B158DRAFT_0298 0.51 -0.7 301,838 + B158DRAFT_0298 0.51 -0.6 301,838 + B158DRAFT_0298 0.51 +0.7 301,838 + B158DRAFT_0298 0.51 -1.8 301,838 + B158DRAFT_0298 0.51 +0.5 301,846 - B158DRAFT_0298 0.52 -0.6 301,846 - B158DRAFT_0298 0.52 -1.2 301,846 - B158DRAFT_0298 0.52 -0.8 301,846 - B158DRAFT_0298 0.52 -1.1 301,846 - B158DRAFT_0298 0.52 +0.3 301,846 - B158DRAFT_0298 0.52 -0.8 301,856 - B158DRAFT_0298 0.53 -0.2 301,868 + B158DRAFT_0298 0.54 -0.8 302,002 - B158DRAFT_0298 0.67 -0.6 302,002 - B158DRAFT_0298 0.67 -1.1 302,002 - B158DRAFT_0298 0.67 +1.0 302,003 - B158DRAFT_0298 0.67 +1.1 302,011 + B158DRAFT_0298 0.68 +0.6 302,016 + B158DRAFT_0298 0.68 -0.6 302,016 + B158DRAFT_0298 0.68 -0.0 302,019 - B158DRAFT_0298 0.68 -1.7 302,019 - B158DRAFT_0298 0.68 -0.9 302,092 + B158DRAFT_0298 0.75 -1.9 302,120 - B158DRAFT_0298 0.78 +0.0 302,139 - B158DRAFT_0298 0.80 -0.3 302,175 + B158DRAFT_0298 0.83 -0.7 302,183 - B158DRAFT_0298 0.84 -0.8 302,354 + -0.1 302,396 - -1.0 302,412 - +0.6 302,496 + -1.0 302,504 - -1.7 302,504 - -1.2 302,504 - -0.8 302,586 + B158DRAFT_0299 0.13 -1.4 302,591 + B158DRAFT_0299 0.14 -0.4 302,591 + B158DRAFT_0299 0.14 -1.6 302,594 - B158DRAFT_0299 0.14 +1.2 302,599 - B158DRAFT_0299 0.15 -0.9 302,599 - B158DRAFT_0299 0.15 -2.7 302,599 - B158DRAFT_0299 0.15 -0.4 302,599 - B158DRAFT_0299 0.15 -0.7 302,750 - B158DRAFT_0299 0.38 -2.0 302,758 - B158DRAFT_0299 0.39 +0.5 302,758 - B158DRAFT_0299 0.39 +1.7 302,811 + B158DRAFT_0299 0.47 -0.3 302,885 + B158DRAFT_0299 0.59 +0.3 302,925 - B158DRAFT_0299 0.65 -0.1 302,977 + B158DRAFT_0299 0.73 -0.3 302,985 - B158DRAFT_0299 0.74 -0.2 303,038 + B158DRAFT_0299 0.82 -0.6 303,071 + B158DRAFT_0299 0.87 -1.3 303,193 - -0.7 303,297 - -1.5 303,409 - B158DRAFT_0300 0.11 +1.2 303,440 - B158DRAFT_0300 0.13 -1.0 303,660 + B158DRAFT_0300 0.23 -2.8 303,660 + B158DRAFT_0300 0.23 -1.2 303,668 - B158DRAFT_0300 0.24 +0.2 303,668 - B158DRAFT_0300 0.24 +3.5 303,673 - B158DRAFT_0300 0.24 -1.4 303,745 + B158DRAFT_0300 0.28 -0.2 303,814 + B158DRAFT_0300 0.31 +0.0 303,874 + B158DRAFT_0300 0.34 -0.2 303,980 - B158DRAFT_0300 0.39 -1.4 303,981 + B158DRAFT_0300 0.39 -0.7 303,987 + B158DRAFT_0300 0.39 -1.8 304,089 + B158DRAFT_0300 0.44 -0.4 304,097 - B158DRAFT_0300 0.45 -0.4 304,097 - B158DRAFT_0300 0.45 +3.0 304,097 - B158DRAFT_0300 0.45 +0.3 304,099 + B158DRAFT_0300 0.45 -0.8 304,107 - B158DRAFT_0300 0.45 +0.3 304,112 - B158DRAFT_0300 0.45 -1.5 304,145 + B158DRAFT_0300 0.47 -2.6
Or see this region's nucleotide sequence