Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0202

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0201 and B158DRAFT_0202 are separated by 48 nucleotidesB158DRAFT_0202 and B158DRAFT_0203 are separated by 362 nucleotides B158DRAFT_0201: B158DRAFT_0201 - coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22), at 205,905 to 207,137 _0201 B158DRAFT_0202: B158DRAFT_0202 - Heat shock protein, at 207,186 to 208,193 _0202 B158DRAFT_0203: B158DRAFT_0203 - tRNA (guanine-N(7)-)-methyltransferase, at 208,556 to 209,257 _0203 Position (kb) 207 208 209Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 206.200 kb on - strand, within B158DRAFT_0201at 206.236 kb on + strand, within B158DRAFT_0201at 206.288 kb on + strand, within B158DRAFT_0201at 206.295 kb on + strand, within B158DRAFT_0201at 206.295 kb on + strand, within B158DRAFT_0201at 206.298 kb on + strand, within B158DRAFT_0201at 206.298 kb on + strand, within B158DRAFT_0201at 206.303 kb on - strand, within B158DRAFT_0201at 206.336 kb on - strand, within B158DRAFT_0201at 206.342 kb on + strand, within B158DRAFT_0201at 206.342 kb on + strand, within B158DRAFT_0201at 206.347 kb on + strand, within B158DRAFT_0201at 206.350 kb on - strand, within B158DRAFT_0201at 206.350 kb on - strand, within B158DRAFT_0201at 206.350 kb on - strand, within B158DRAFT_0201at 206.409 kb on - strand, within B158DRAFT_0201at 206.515 kb on + strand, within B158DRAFT_0201at 206.523 kb on - strand, within B158DRAFT_0201at 206.523 kb on - strand, within B158DRAFT_0201at 206.578 kb on + strand, within B158DRAFT_0201at 206.583 kb on + strand, within B158DRAFT_0201at 206.602 kb on - strand, within B158DRAFT_0201at 206.628 kb on - strand, within B158DRAFT_0201at 206.628 kb on - strand, within B158DRAFT_0201at 206.628 kb on - strand, within B158DRAFT_0201at 206.658 kb on + strand, within B158DRAFT_0201at 206.658 kb on + strand, within B158DRAFT_0201at 206.664 kb on - strand, within B158DRAFT_0201at 206.704 kb on - strand, within B158DRAFT_0201at 206.751 kb on + strand, within B158DRAFT_0201at 206.762 kb on + strand, within B158DRAFT_0201at 206.764 kb on - strand, within B158DRAFT_0201at 206.891 kb on + strand, within B158DRAFT_0201at 206.891 kb on + strand, within B158DRAFT_0201at 206.924 kb on + strand, within B158DRAFT_0201at 206.944 kb on + strand, within B158DRAFT_0201at 206.947 kb on - strand, within B158DRAFT_0201at 206.947 kb on - strand, within B158DRAFT_0201at 206.958 kb on + strand, within B158DRAFT_0201at 206.967 kb on - strand, within B158DRAFT_0201at 207.039 kb on - strandat 207.089 kb on + strandat 207.216 kb on - strandat 207.265 kb on - strandat 207.265 kb on - strandat 207.279 kb on + strandat 207.287 kb on - strand, within B158DRAFT_0202at 207.289 kb on + strand, within B158DRAFT_0202at 207.297 kb on - strand, within B158DRAFT_0202at 207.344 kb on + strand, within B158DRAFT_0202at 207.352 kb on - strand, within B158DRAFT_0202at 207.352 kb on - strand, within B158DRAFT_0202at 207.423 kb on + strand, within B158DRAFT_0202at 207.423 kb on + strand, within B158DRAFT_0202at 207.431 kb on - strand, within B158DRAFT_0202at 207.449 kb on + strand, within B158DRAFT_0202at 207.490 kb on + strand, within B158DRAFT_0202at 207.518 kb on - strand, within B158DRAFT_0202at 207.603 kb on + strand, within B158DRAFT_0202at 207.739 kb on + strand, within B158DRAFT_0202at 207.739 kb on + strand, within B158DRAFT_0202at 207.747 kb on - strand, within B158DRAFT_0202at 207.753 kb on - strand, within B158DRAFT_0202at 207.778 kb on + strand, within B158DRAFT_0202at 207.791 kb on + strand, within B158DRAFT_0202at 207.811 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.850 kb on - strand, within B158DRAFT_0202at 207.882 kb on - strand, within B158DRAFT_0202at 207.922 kb on + strand, within B158DRAFT_0202at 207.930 kb on - strand, within B158DRAFT_0202at 207.930 kb on - strand, within B158DRAFT_0202at 207.962 kb on - strand, within B158DRAFT_0202at 208.033 kb on - strand, within B158DRAFT_0202at 208.053 kb on - strand, within B158DRAFT_0202at 208.365 kb on - strandat 208.422 kb on + strandat 208.422 kb on + strandat 208.422 kb on + strandat 208.422 kb on + strandat 208.428 kb on - strandat 208.430 kb on - strandat 208.430 kb on - strandat 208.591 kb on + strandat 208.599 kb on - strandat 208.606 kb on - strandat 208.636 kb on + strand, within B158DRAFT_0203at 208.709 kb on + strand, within B158DRAFT_0203at 208.727 kb on - strand, within B158DRAFT_0203at 208.958 kb on + strand, within B158DRAFT_0203at 208.961 kb on - strand, within B158DRAFT_0203at 208.965 kb on - strand, within B158DRAFT_0203at 208.965 kb on - strand, within B158DRAFT_0203at 208.965 kb on - strand, within B158DRAFT_0203at 208.980 kb on + strand, within B158DRAFT_0203at 208.980 kb on + strand, within B158DRAFT_0203at 209.022 kb on + strand, within B158DRAFT_0203at 209.022 kb on + strand, within B158DRAFT_0203at 209.022 kb on + strand, within B158DRAFT_0203at 209.030 kb on - strand, within B158DRAFT_0203at 209.051 kb on - strand, within B158DRAFT_0203at 209.178 kb on - strand, within B158DRAFT_0203

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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206,200 - B158DRAFT_0201 0.24 +1.7
206,236 + B158DRAFT_0201 0.27 +1.3
206,288 + B158DRAFT_0201 0.31 -0.4
206,295 + B158DRAFT_0201 0.32 +1.1
206,295 + B158DRAFT_0201 0.32 +2.3
206,298 + B158DRAFT_0201 0.32 -1.7
206,298 + B158DRAFT_0201 0.32 +0.5
206,303 - B158DRAFT_0201 0.32 -0.9
206,336 - B158DRAFT_0201 0.35 +0.4
206,342 + B158DRAFT_0201 0.35 +6.7
206,342 + B158DRAFT_0201 0.35 -2.4
206,347 + B158DRAFT_0201 0.36 +3.0
206,350 - B158DRAFT_0201 0.36 -1.2
206,350 - B158DRAFT_0201 0.36 +1.4
206,350 - B158DRAFT_0201 0.36 +0.4
206,409 - B158DRAFT_0201 0.41 -0.0
206,515 + B158DRAFT_0201 0.49 -1.0
206,523 - B158DRAFT_0201 0.50 -2.0
206,523 - B158DRAFT_0201 0.50 +0.2
206,578 + B158DRAFT_0201 0.55 -2.9
206,583 + B158DRAFT_0201 0.55 +0.0
206,602 - B158DRAFT_0201 0.57 +0.2
206,628 - B158DRAFT_0201 0.59 -0.2
206,628 - B158DRAFT_0201 0.59 -1.9
206,628 - B158DRAFT_0201 0.59 -1.3
206,658 + B158DRAFT_0201 0.61 -0.1
206,658 + B158DRAFT_0201 0.61 -0.5
206,664 - B158DRAFT_0201 0.62 -1.7
206,704 - B158DRAFT_0201 0.65 +2.8
206,751 + B158DRAFT_0201 0.69 +0.6
206,762 + B158DRAFT_0201 0.70 +2.6
206,764 - B158DRAFT_0201 0.70 -0.2
206,891 + B158DRAFT_0201 0.80 -0.9
206,891 + B158DRAFT_0201 0.80 -0.6
206,924 + B158DRAFT_0201 0.83 -2.5
206,944 + B158DRAFT_0201 0.84 +1.2
206,947 - B158DRAFT_0201 0.85 +0.1
206,947 - B158DRAFT_0201 0.85 -0.4
206,958 + B158DRAFT_0201 0.85 +0.5
206,967 - B158DRAFT_0201 0.86 -2.3
207,039 - -1.6
207,089 + -1.2
207,216 - -0.9
207,265 - +1.8
207,265 - +0.3
207,279 + -3.0
207,287 - B158DRAFT_0202 0.10 +0.2
207,289 + B158DRAFT_0202 0.10 -0.3
207,297 - B158DRAFT_0202 0.11 -2.3
207,344 + B158DRAFT_0202 0.16 -1.6
207,352 - B158DRAFT_0202 0.16 +0.5
207,352 - B158DRAFT_0202 0.16 -0.4
207,423 + B158DRAFT_0202 0.24 -0.4
207,423 + B158DRAFT_0202 0.24 -0.7
207,431 - B158DRAFT_0202 0.24 +0.3
207,449 + B158DRAFT_0202 0.26 +0.1
207,490 + B158DRAFT_0202 0.30 -0.7
207,518 - B158DRAFT_0202 0.33 -0.7
207,603 + B158DRAFT_0202 0.41 +0.5
207,739 + B158DRAFT_0202 0.55 -1.1
207,739 + B158DRAFT_0202 0.55 -0.8
207,747 - B158DRAFT_0202 0.56 -1.0
207,753 - B158DRAFT_0202 0.56 +1.8
207,778 + B158DRAFT_0202 0.59 -0.6
207,791 + B158DRAFT_0202 0.60 +1.0
207,811 + B158DRAFT_0202 0.62 +0.2
207,834 + B158DRAFT_0202 0.64 +2.2
207,834 + B158DRAFT_0202 0.64 -1.1
207,834 + B158DRAFT_0202 0.64 -0.8
207,834 + B158DRAFT_0202 0.64 -1.4
207,834 + B158DRAFT_0202 0.64 +2.2
207,834 + B158DRAFT_0202 0.64 +0.3
207,834 + B158DRAFT_0202 0.64 -1.3
207,834 + B158DRAFT_0202 0.64 -3.6
207,834 + B158DRAFT_0202 0.64 -2.6
207,834 + B158DRAFT_0202 0.64 -1.3
207,834 + B158DRAFT_0202 0.64 +0.3
207,834 + B158DRAFT_0202 0.64 -0.2
207,834 + B158DRAFT_0202 0.64 +1.6
207,834 + B158DRAFT_0202 0.64 +1.8
207,842 - B158DRAFT_0202 0.65 -0.3
207,842 - B158DRAFT_0202 0.65 -1.7
207,842 - B158DRAFT_0202 0.65 +0.0
207,842 - B158DRAFT_0202 0.65 -0.9
207,842 - B158DRAFT_0202 0.65 -1.1
207,842 - B158DRAFT_0202 0.65 +1.2
207,842 - B158DRAFT_0202 0.65 +2.6
207,842 - B158DRAFT_0202 0.65 +2.0
207,842 - B158DRAFT_0202 0.65 -0.9
207,842 - B158DRAFT_0202 0.65 +1.5
207,842 - B158DRAFT_0202 0.65 +0.4
207,842 - B158DRAFT_0202 0.65 +3.7
207,842 - B158DRAFT_0202 0.65 -1.4
207,842 - B158DRAFT_0202 0.65 +1.3
207,842 - B158DRAFT_0202 0.65 +0.9
207,842 - B158DRAFT_0202 0.65 -0.3
207,842 - B158DRAFT_0202 0.65 -0.0
207,850 - B158DRAFT_0202 0.66 -0.7
207,882 - B158DRAFT_0202 0.69 +2.3
207,922 + B158DRAFT_0202 0.73 -0.0
207,930 - B158DRAFT_0202 0.74 -1.8
207,930 - B158DRAFT_0202 0.74 -1.5
207,962 - B158DRAFT_0202 0.77 +0.2
208,033 - B158DRAFT_0202 0.84 +0.8
208,053 - B158DRAFT_0202 0.86 -0.5
208,365 - +0.4
208,422 + +0.0
208,422 + +1.3
208,422 + -0.6
208,422 + +0.1
208,428 - +0.1
208,430 - -2.2
208,430 - -1.3
208,591 + -1.3
208,599 - +0.1
208,606 - -2.1
208,636 + B158DRAFT_0203 0.11 -0.2
208,709 + B158DRAFT_0203 0.22 -0.9
208,727 - B158DRAFT_0203 0.24 +0.0
208,958 + B158DRAFT_0203 0.57 -1.0
208,961 - B158DRAFT_0203 0.58 +0.9
208,965 - B158DRAFT_0203 0.58 -1.4
208,965 - B158DRAFT_0203 0.58 +0.1
208,965 - B158DRAFT_0203 0.58 -0.7
208,980 + B158DRAFT_0203 0.60 +0.1
208,980 + B158DRAFT_0203 0.60 -0.7
209,022 + B158DRAFT_0203 0.66 +0.5
209,022 + B158DRAFT_0203 0.66 -0.6
209,022 + B158DRAFT_0203 0.66 -0.1
209,030 - B158DRAFT_0203 0.68 +0.5
209,051 - B158DRAFT_0203 0.71 +5.7
209,178 - B158DRAFT_0203 0.89 -0.8

Or see this region's nucleotide sequence