Experiment: m.b. Sisomicin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0185 and B158DRAFT_0186 are separated by 42 nucleotides B158DRAFT_0186 and B158DRAFT_0187 are separated by 6 nucleotides B158DRAFT_0187 and B158DRAFT_0188 are separated by 36 nucleotides
B158DRAFT_0185: B158DRAFT_0185 - Methyl-accepting chemotaxis protein, at 190,614 to 192,956
_0185
B158DRAFT_0186: B158DRAFT_0186 - Chemotaxis signal transduction protein, at 192,999 to 193,547
_0186
B158DRAFT_0187: B158DRAFT_0187 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 193,554 to 193,919
_0187
B158DRAFT_0188: B158DRAFT_0188 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 193,956 to 194,354
_0188
Position (kb) 192
193
194 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 192.041 kb on - strand, within B158DRAFT_0185 at 192.093 kb on + strand, within B158DRAFT_0185 at 192.101 kb on - strand, within B158DRAFT_0185 at 192.135 kb on + strand, within B158DRAFT_0185 at 192.150 kb on - strand, within B158DRAFT_0185 at 192.196 kb on - strand, within B158DRAFT_0185 at 192.219 kb on + strand, within B158DRAFT_0185 at 192.219 kb on + strand, within B158DRAFT_0185 at 192.219 kb on + strand, within B158DRAFT_0185 at 192.227 kb on - strand, within B158DRAFT_0185 at 192.227 kb on - strand, within B158DRAFT_0185 at 192.269 kb on + strand, within B158DRAFT_0185 at 192.277 kb on + strand, within B158DRAFT_0185 at 192.304 kb on - strand, within B158DRAFT_0185 at 192.393 kb on - strand, within B158DRAFT_0185 at 192.548 kb on - strand, within B158DRAFT_0185 at 192.572 kb on - strand, within B158DRAFT_0185 at 192.608 kb on - strand, within B158DRAFT_0185 at 192.960 kb on - strand at 193.083 kb on + strand, within B158DRAFT_0186 at 193.085 kb on + strand, within B158DRAFT_0186 at 193.129 kb on + strand, within B158DRAFT_0186 at 193.129 kb on + strand, within B158DRAFT_0186 at 193.136 kb on - strand, within B158DRAFT_0186 at 193.137 kb on - strand, within B158DRAFT_0186 at 193.195 kb on - strand, within B158DRAFT_0186 at 193.195 kb on - strand, within B158DRAFT_0186 at 193.198 kb on + strand, within B158DRAFT_0186 at 193.206 kb on - strand, within B158DRAFT_0186 at 193.269 kb on - strand, within B158DRAFT_0186 at 193.316 kb on + strand, within B158DRAFT_0186 at 193.324 kb on - strand, within B158DRAFT_0186 at 193.431 kb on + strand, within B158DRAFT_0186 at 193.537 kb on + strand at 193.545 kb on + strand at 193.593 kb on + strand, within B158DRAFT_0187 at 193.786 kb on - strand, within B158DRAFT_0187 at 193.803 kb on + strand, within B158DRAFT_0187 at 193.991 kb on - strand at 193.993 kb on - strand at 194.058 kb on + strand, within B158DRAFT_0188 at 194.086 kb on + strand, within B158DRAFT_0188 at 194.156 kb on - strand, within B158DRAFT_0188 at 194.200 kb on + strand, within B158DRAFT_0188 at 194.288 kb on - strand, within B158DRAFT_0188 at 194.335 kb on + strand at 194.343 kb on - strand at 194.364 kb on + strand at 194.372 kb on - strand at 194.372 kb on - strand at 194.464 kb on + strand at 194.536 kb on + strand at 194.537 kb on - strand at 194.537 kb on - strand at 194.545 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml remove 192,041 - B158DRAFT_0185 0.61 +0.1 192,093 + B158DRAFT_0185 0.63 +1.1 192,101 - B158DRAFT_0185 0.63 -1.1 192,135 + B158DRAFT_0185 0.65 +2.1 192,150 - B158DRAFT_0185 0.66 +0.3 192,196 - B158DRAFT_0185 0.68 +0.4 192,219 + B158DRAFT_0185 0.69 +1.0 192,219 + B158DRAFT_0185 0.69 +0.5 192,219 + B158DRAFT_0185 0.69 +0.4 192,227 - B158DRAFT_0185 0.69 +2.5 192,227 - B158DRAFT_0185 0.69 +2.2 192,269 + B158DRAFT_0185 0.71 +0.9 192,277 + B158DRAFT_0185 0.71 -0.7 192,304 - B158DRAFT_0185 0.72 +0.4 192,393 - B158DRAFT_0185 0.76 -0.6 192,548 - B158DRAFT_0185 0.83 +0.4 192,572 - B158DRAFT_0185 0.84 +0.8 192,608 - B158DRAFT_0185 0.85 -0.8 192,960 - +0.3 193,083 + B158DRAFT_0186 0.15 +1.1 193,085 + B158DRAFT_0186 0.16 +1.6 193,129 + B158DRAFT_0186 0.24 +3.4 193,129 + B158DRAFT_0186 0.24 +0.9 193,136 - B158DRAFT_0186 0.25 +2.3 193,137 - B158DRAFT_0186 0.25 +1.1 193,195 - B158DRAFT_0186 0.36 +1.6 193,195 - B158DRAFT_0186 0.36 +0.4 193,198 + B158DRAFT_0186 0.36 +2.1 193,206 - B158DRAFT_0186 0.38 +1.4 193,269 - B158DRAFT_0186 0.49 -0.7 193,316 + B158DRAFT_0186 0.58 +0.5 193,324 - B158DRAFT_0186 0.59 -0.6 193,431 + B158DRAFT_0186 0.79 +0.4 193,537 + +1.3 193,545 + +1.3 193,593 + B158DRAFT_0187 0.11 +1.7 193,786 - B158DRAFT_0187 0.63 +2.1 193,803 + B158DRAFT_0187 0.68 -1.9 193,991 - +0.8 193,993 - -0.1 194,058 + B158DRAFT_0188 0.26 -1.6 194,086 + B158DRAFT_0188 0.33 +1.9 194,156 - B158DRAFT_0188 0.50 -1.0 194,200 + B158DRAFT_0188 0.61 +2.2 194,288 - B158DRAFT_0188 0.83 +4.8 194,335 + -0.2 194,343 - +1.7 194,364 + +0.5 194,372 - +0.9 194,372 - -1.5 194,464 + -0.5 194,536 + -1.9 194,537 - -1.3 194,537 - +0.8 194,545 + +0.9
Or see this region's nucleotide sequence