Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0134

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0132 and B158DRAFT_0133 are separated by 62 nucleotidesB158DRAFT_0133 and B158DRAFT_0134 are separated by 70 nucleotidesB158DRAFT_0134 and B158DRAFT_0135 are separated by 35 nucleotidesB158DRAFT_0135 and B158DRAFT_0136 are separated by 27 nucleotides B158DRAFT_0132: B158DRAFT_0132 - hypothetical protein, at 130,352 to 131,191 _0132 B158DRAFT_0133: B158DRAFT_0133 - Uncharacterized iron-regulated protein, at 131,254 to 131,937 _0133 B158DRAFT_0134: B158DRAFT_0134 - Heme/copper-type cytochrome/quinol oxidase, subunit 3, at 132,008 to 132,880 _0134 B158DRAFT_0135: B158DRAFT_0135 - Cytochrome oxidase assembly factor, at 132,916 to 133,485 _0135 B158DRAFT_0136: B158DRAFT_0136 - cytochrome c oxidase, subunit I, at 133,513 to 135,072 _0136 Position (kb) 132 133Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 131.021 kb on + strand, within B158DRAFT_0132at 131.021 kb on + strand, within B158DRAFT_0132at 131.029 kb on - strand, within B158DRAFT_0132at 131.029 kb on - strand, within B158DRAFT_0132at 131.029 kb on - strand, within B158DRAFT_0132at 131.036 kb on + strand, within B158DRAFT_0132at 131.041 kb on + strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.054 kb on - strand, within B158DRAFT_0132at 131.056 kb on + strand, within B158DRAFT_0132at 131.056 kb on + strand, within B158DRAFT_0132at 131.056 kb on + strand, within B158DRAFT_0132at 131.087 kb on + strand, within B158DRAFT_0132at 131.152 kb on - strandat 131.154 kb on + strandat 131.164 kb on - strandat 131.201 kb on - strandat 131.318 kb on + strandat 131.318 kb on + strandat 131.326 kb on - strand, within B158DRAFT_0133at 131.328 kb on + strand, within B158DRAFT_0133at 131.375 kb on + strand, within B158DRAFT_0133at 131.377 kb on + strand, within B158DRAFT_0133at 131.377 kb on + strand, within B158DRAFT_0133at 131.377 kb on + strand, within B158DRAFT_0133at 131.377 kb on + strand, within B158DRAFT_0133at 131.383 kb on - strand, within B158DRAFT_0133at 131.383 kb on - strand, within B158DRAFT_0133at 131.385 kb on - strand, within B158DRAFT_0133at 131.385 kb on - strand, within B158DRAFT_0133at 131.391 kb on - strand, within B158DRAFT_0133at 131.419 kb on + strand, within B158DRAFT_0133at 131.443 kb on + strand, within B158DRAFT_0133at 131.519 kb on + strand, within B158DRAFT_0133at 131.626 kb on - strand, within B158DRAFT_0133at 131.634 kb on - strand, within B158DRAFT_0133at 131.634 kb on - strand, within B158DRAFT_0133at 131.663 kb on - strand, within B158DRAFT_0133at 131.694 kb on + strand, within B158DRAFT_0133at 131.712 kb on + strand, within B158DRAFT_0133at 131.841 kb on + strand, within B158DRAFT_0133at 131.849 kb on - strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.891 kb on - strandat 131.940 kb on - strandat 131.940 kb on - strandat 132.014 kb on - strandat 132.034 kb on + strandat 132.039 kb on + strandat 132.139 kb on - strand, within B158DRAFT_0134at 132.276 kb on + strand, within B158DRAFT_0134at 132.284 kb on - strand, within B158DRAFT_0134at 132.319 kb on + strand, within B158DRAFT_0134at 132.327 kb on - strand, within B158DRAFT_0134at 132.419 kb on - strand, within B158DRAFT_0134at 132.481 kb on - strand, within B158DRAFT_0134at 132.644 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.664 kb on - strand, within B158DRAFT_0134at 132.664 kb on - strand, within B158DRAFT_0134at 132.664 kb on - strand, within B158DRAFT_0134at 132.664 kb on - strand, within B158DRAFT_0134at 132.664 kb on - strand, within B158DRAFT_0134at 132.664 kb on - strand, within B158DRAFT_0134at 132.664 kb on - strand, within B158DRAFT_0134at 132.758 kb on + strand, within B158DRAFT_0134at 132.766 kb on - strand, within B158DRAFT_0134at 132.767 kb on + strand, within B158DRAFT_0134at 132.767 kb on + strand, within B158DRAFT_0134at 132.886 kb on - strandat 132.890 kb on + strandat 132.898 kb on - strandat 132.908 kb on - strandat 132.908 kb on - strandat 132.908 kb on - strandat 132.908 kb on - strandat 132.913 kb on + strandat 132.965 kb on + strandat 132.965 kb on + strandat 132.965 kb on + strandat 132.965 kb on + strandat 132.973 kb on - strand, within B158DRAFT_0135at 132.973 kb on - strand, within B158DRAFT_0135at 132.973 kb on - strand, within B158DRAFT_0135at 133.011 kb on - strand, within B158DRAFT_0135at 133.011 kb on - strand, within B158DRAFT_0135at 133.073 kb on - strand, within B158DRAFT_0135at 133.147 kb on + strand, within B158DRAFT_0135at 133.155 kb on - strand, within B158DRAFT_0135at 133.199 kb on + strand, within B158DRAFT_0135at 133.205 kb on + strand, within B158DRAFT_0135at 133.206 kb on + strand, within B158DRAFT_0135at 133.207 kb on - strand, within B158DRAFT_0135at 133.317 kb on + strand, within B158DRAFT_0135at 133.317 kb on + strand, within B158DRAFT_0135at 133.325 kb on - strand, within B158DRAFT_0135at 133.410 kb on + strand, within B158DRAFT_0135at 133.440 kb on - strandat 133.483 kb on - strandat 133.506 kb on + strandat 133.575 kb on + strandat 133.583 kb on - strandat 133.584 kb on + strandat 133.640 kb on + strandat 133.669 kb on - strand, within B158DRAFT_0136at 133.669 kb on - strand, within B158DRAFT_0136at 133.680 kb on - strand, within B158DRAFT_0136at 133.692 kb on + strand, within B158DRAFT_0136at 133.700 kb on - strand, within B158DRAFT_0136at 133.762 kb on + strand, within B158DRAFT_0136

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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131,021 + B158DRAFT_0132 0.80 -0.1
131,021 + B158DRAFT_0132 0.80 +0.2
131,029 - B158DRAFT_0132 0.81 -1.3
131,029 - B158DRAFT_0132 0.81 -0.7
131,029 - B158DRAFT_0132 0.81 +0.6
131,036 + B158DRAFT_0132 0.81 -0.5
131,041 + B158DRAFT_0132 0.82 -0.3
131,049 - B158DRAFT_0132 0.83 -1.5
131,049 - B158DRAFT_0132 0.83 +4.7
131,049 - B158DRAFT_0132 0.83 -0.6
131,049 - B158DRAFT_0132 0.83 +0.1
131,049 - B158DRAFT_0132 0.83 +0.1
131,049 - B158DRAFT_0132 0.83 +1.0
131,054 - B158DRAFT_0132 0.84 +1.5
131,056 + B158DRAFT_0132 0.84 -0.2
131,056 + B158DRAFT_0132 0.84 +1.9
131,056 + B158DRAFT_0132 0.84 -1.5
131,087 + B158DRAFT_0132 0.88 -0.5
131,152 - -2.9
131,154 + -0.6
131,164 - -0.4
131,201 - +1.0
131,318 + -0.2
131,318 + +0.4
131,326 - B158DRAFT_0133 0.11 -0.6
131,328 + B158DRAFT_0133 0.11 +0.7
131,375 + B158DRAFT_0133 0.18 +0.1
131,377 + B158DRAFT_0133 0.18 -1.5
131,377 + B158DRAFT_0133 0.18 -1.0
131,377 + B158DRAFT_0133 0.18 -0.5
131,377 + B158DRAFT_0133 0.18 +1.8
131,383 - B158DRAFT_0133 0.19 +1.1
131,383 - B158DRAFT_0133 0.19 -0.3
131,385 - B158DRAFT_0133 0.19 -0.4
131,385 - B158DRAFT_0133 0.19 -2.0
131,391 - B158DRAFT_0133 0.20 +0.1
131,419 + B158DRAFT_0133 0.24 -0.4
131,443 + B158DRAFT_0133 0.28 -0.2
131,519 + B158DRAFT_0133 0.39 +0.1
131,626 - B158DRAFT_0133 0.54 -0.5
131,634 - B158DRAFT_0133 0.56 +0.4
131,634 - B158DRAFT_0133 0.56 +0.5
131,663 - B158DRAFT_0133 0.60 -0.6
131,694 + B158DRAFT_0133 0.64 -0.3
131,712 + B158DRAFT_0133 0.67 +2.8
131,841 + B158DRAFT_0133 0.86 -0.6
131,849 - B158DRAFT_0133 0.87 -0.1
131,868 + B158DRAFT_0133 0.90 -0.5
131,868 + B158DRAFT_0133 0.90 +3.1
131,868 + B158DRAFT_0133 0.90 -0.1
131,868 + B158DRAFT_0133 0.90 -0.9
131,868 + B158DRAFT_0133 0.90 -1.0
131,868 + B158DRAFT_0133 0.90 -1.3
131,868 + B158DRAFT_0133 0.90 -0.8
131,868 + B158DRAFT_0133 0.90 -0.7
131,868 + B158DRAFT_0133 0.90 -0.5
131,868 + B158DRAFT_0133 0.90 -1.6
131,868 + B158DRAFT_0133 0.90 +0.2
131,868 + B158DRAFT_0133 0.90 +1.3
131,868 + B158DRAFT_0133 0.90 -0.4
131,868 + B158DRAFT_0133 0.90 -0.5
131,868 + B158DRAFT_0133 0.90 +0.9
131,868 + B158DRAFT_0133 0.90 -2.2
131,868 + B158DRAFT_0133 0.90 -1.1
131,868 + B158DRAFT_0133 0.90 -0.2
131,868 + B158DRAFT_0133 0.90 +1.5
131,868 + B158DRAFT_0133 0.90 -0.1
131,868 + B158DRAFT_0133 0.90 +0.8
131,868 + B158DRAFT_0133 0.90 -0.7
131,876 - +0.1
131,876 - -1.4
131,876 - -0.6
131,876 - -0.7
131,876 - +1.0
131,876 - +0.3
131,876 - -1.5
131,876 - +0.7
131,876 - -0.6
131,876 - +0.6
131,876 - +2.5
131,876 - -0.0
131,876 - -1.3
131,876 - -0.2
131,876 - -1.0
131,891 - +0.3
131,940 - -1.2
131,940 - -1.1
132,014 - +2.2
132,034 + +1.4
132,039 + -0.4
132,139 - B158DRAFT_0134 0.15 +1.2
132,276 + B158DRAFT_0134 0.31 -1.1
132,284 - B158DRAFT_0134 0.32 -1.7
132,319 + B158DRAFT_0134 0.36 -1.2
132,327 - B158DRAFT_0134 0.37 +0.5
132,419 - B158DRAFT_0134 0.47 +1.3
132,481 - B158DRAFT_0134 0.54 +2.2
132,644 + B158DRAFT_0134 0.73 +1.9
132,656 + B158DRAFT_0134 0.74 -0.1
132,656 + B158DRAFT_0134 0.74 +1.1
132,656 + B158DRAFT_0134 0.74 +1.4
132,656 + B158DRAFT_0134 0.74 +2.4
132,656 + B158DRAFT_0134 0.74 +0.8
132,656 + B158DRAFT_0134 0.74 +1.1
132,656 + B158DRAFT_0134 0.74 -0.7
132,656 + B158DRAFT_0134 0.74 +1.5
132,656 + B158DRAFT_0134 0.74 +1.9
132,656 + B158DRAFT_0134 0.74 +0.8
132,664 - B158DRAFT_0134 0.75 -0.6
132,664 - B158DRAFT_0134 0.75 -0.2
132,664 - B158DRAFT_0134 0.75 +1.8
132,664 - B158DRAFT_0134 0.75 +0.1
132,664 - B158DRAFT_0134 0.75 +0.7
132,664 - B158DRAFT_0134 0.75 +0.8
132,664 - B158DRAFT_0134 0.75 +0.8
132,758 + B158DRAFT_0134 0.86 +1.9
132,766 - B158DRAFT_0134 0.87 +2.8
132,767 + B158DRAFT_0134 0.87 -0.1
132,767 + B158DRAFT_0134 0.87 +2.2
132,886 - -0.0
132,890 + +1.1
132,898 - -0.6
132,908 - -0.9
132,908 - +0.2
132,908 - +0.8
132,908 - +0.1
132,913 + +0.9
132,965 + +1.2
132,965 + +0.6
132,965 + +2.0
132,965 + +1.8
132,973 - B158DRAFT_0135 0.10 -1.1
132,973 - B158DRAFT_0135 0.10 +2.3
132,973 - B158DRAFT_0135 0.10 +1.6
133,011 - B158DRAFT_0135 0.17 +2.2
133,011 - B158DRAFT_0135 0.17 -0.6
133,073 - B158DRAFT_0135 0.28 +1.3
133,147 + B158DRAFT_0135 0.41 -0.5
133,155 - B158DRAFT_0135 0.42 +2.0
133,199 + B158DRAFT_0135 0.50 +3.2
133,205 + B158DRAFT_0135 0.51 +2.5
133,206 + B158DRAFT_0135 0.51 +1.6
133,207 - B158DRAFT_0135 0.51 +2.7
133,317 + B158DRAFT_0135 0.70 +0.5
133,317 + B158DRAFT_0135 0.70 +2.5
133,325 - B158DRAFT_0135 0.72 +2.0
133,410 + B158DRAFT_0135 0.87 +1.6
133,440 - +0.3
133,483 - +0.9
133,506 + +2.3
133,575 + +1.0
133,583 - +0.1
133,584 + +0.6
133,640 + +0.6
133,669 - B158DRAFT_0136 0.10 +0.6
133,669 - B158DRAFT_0136 0.10 +1.9
133,680 - B158DRAFT_0136 0.11 -0.1
133,692 + B158DRAFT_0136 0.11 +1.0
133,700 - B158DRAFT_0136 0.12 -0.8
133,762 + B158DRAFT_0136 0.16 +0.4

Or see this region's nucleotide sequence