Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0119

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0117 and B158DRAFT_0118 overlap by 4 nucleotidesB158DRAFT_0118 and B158DRAFT_0119 are separated by 42 nucleotidesB158DRAFT_0119 and B158DRAFT_0120 overlap by 4 nucleotides B158DRAFT_0117: B158DRAFT_0117 - NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K), at 115,181 to 115,483 _0117 B158DRAFT_0118: B158DRAFT_0118 - NADH dehydrogenase subunit J (EC 1.6.5.3), at 115,480 to 116,160 _0118 B158DRAFT_0119: B158DRAFT_0119 - NADH dehydrogenase subunit I (EC 1.6.5.3), at 116,203 to 116,694 _0119 B158DRAFT_0120: B158DRAFT_0120 - NADH dehydrogenase subunit H (EC 1.6.5.3), at 116,691 to 117,731 _0120 Position (kb) 116 117Strain fitness (log2 ratio) -1 0 1 2 3 4 5 6 7 8 9 10at 115.212 kb on - strand, within B158DRAFT_0117at 115.212 kb on - strand, within B158DRAFT_0117at 115.212 kb on - strand, within B158DRAFT_0117at 115.232 kb on + strand, within B158DRAFT_0117at 115.258 kb on - strand, within B158DRAFT_0117at 115.258 kb on - strand, within B158DRAFT_0117at 115.270 kb on + strand, within B158DRAFT_0117at 115.375 kb on + strand, within B158DRAFT_0117at 115.383 kb on - strand, within B158DRAFT_0117at 115.386 kb on - strand, within B158DRAFT_0117at 115.432 kb on + strand, within B158DRAFT_0117at 115.489 kb on - strandat 115.501 kb on - strandat 115.541 kb on + strandat 115.560 kb on + strand, within B158DRAFT_0118at 115.610 kb on + strand, within B158DRAFT_0118at 115.615 kb on + strand, within B158DRAFT_0118at 115.615 kb on + strand, within B158DRAFT_0118at 115.623 kb on - strand, within B158DRAFT_0118at 115.630 kb on + strand, within B158DRAFT_0118at 115.736 kb on + strand, within B158DRAFT_0118at 115.736 kb on + strand, within B158DRAFT_0118at 115.736 kb on + strand, within B158DRAFT_0118at 115.749 kb on + strand, within B158DRAFT_0118at 115.757 kb on + strand, within B158DRAFT_0118at 115.758 kb on - strand, within B158DRAFT_0118at 115.768 kb on + strand, within B158DRAFT_0118at 115.824 kb on - strand, within B158DRAFT_0118at 115.889 kb on - strand, within B158DRAFT_0118at 115.905 kb on + strand, within B158DRAFT_0118at 115.905 kb on + strand, within B158DRAFT_0118at 115.905 kb on + strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.915 kb on + strand, within B158DRAFT_0118at 115.954 kb on - strand, within B158DRAFT_0118at 115.973 kb on + strand, within B158DRAFT_0118at 115.978 kb on + strand, within B158DRAFT_0118at 115.981 kb on - strand, within B158DRAFT_0118at 115.981 kb on - strand, within B158DRAFT_0118at 115.981 kb on - strand, within B158DRAFT_0118at 116.031 kb on - strand, within B158DRAFT_0118at 116.059 kb on + strand, within B158DRAFT_0118at 116.067 kb on - strand, within B158DRAFT_0118at 116.090 kb on + strand, within B158DRAFT_0118at 116.098 kb on + strandat 116.119 kb on - strandat 116.155 kb on + strandat 116.199 kb on - strandat 116.201 kb on + strandat 116.387 kb on + strand, within B158DRAFT_0119at 116.434 kb on - strand, within B158DRAFT_0119at 116.482 kb on - strand, within B158DRAFT_0119at 116.549 kb on + strand, within B158DRAFT_0119at 116.549 kb on + strand, within B158DRAFT_0119at 116.557 kb on - strand, within B158DRAFT_0119at 116.568 kb on - strand, within B158DRAFT_0119at 116.587 kb on + strand, within B158DRAFT_0119at 116.587 kb on + strand, within B158DRAFT_0119at 116.616 kb on + strand, within B158DRAFT_0119at 116.616 kb on + strand, within B158DRAFT_0119at 116.639 kb on + strand, within B158DRAFT_0119at 116.697 kb on - strandat 116.729 kb on - strandat 116.745 kb on + strandat 116.786 kb on - strandat 116.801 kb on - strand, within B158DRAFT_0120at 116.832 kb on + strand, within B158DRAFT_0120at 116.832 kb on + strand, within B158DRAFT_0120at 116.892 kb on - strand, within B158DRAFT_0120at 116.937 kb on - strand, within B158DRAFT_0120at 116.944 kb on + strand, within B158DRAFT_0120at 116.949 kb on - strand, within B158DRAFT_0120at 117.011 kb on - strand, within B158DRAFT_0120at 117.024 kb on - strand, within B158DRAFT_0120at 117.026 kb on + strand, within B158DRAFT_0120at 117.034 kb on - strand, within B158DRAFT_0120at 117.082 kb on + strand, within B158DRAFT_0120at 117.090 kb on - strand, within B158DRAFT_0120at 117.090 kb on - strand, within B158DRAFT_0120at 117.092 kb on + strand, within B158DRAFT_0120at 117.112 kb on + strand, within B158DRAFT_0120at 117.189 kb on + strand, within B158DRAFT_0120at 117.258 kb on + strand, within B158DRAFT_0120at 117.259 kb on - strand, within B158DRAFT_0120at 117.259 kb on - strand, within B158DRAFT_0120at 117.259 kb on - strand, within B158DRAFT_0120at 117.362 kb on - strand, within B158DRAFT_0120at 117.383 kb on + strand, within B158DRAFT_0120at 117.385 kb on + strand, within B158DRAFT_0120at 117.385 kb on + strand, within B158DRAFT_0120at 117.400 kb on + strand, within B158DRAFT_0120at 117.400 kb on + strand, within B158DRAFT_0120at 117.408 kb on - strand, within B158DRAFT_0120at 117.435 kb on + strand, within B158DRAFT_0120at 117.549 kb on + strand, within B158DRAFT_0120at 117.556 kb on + strand, within B158DRAFT_0120at 117.556 kb on + strand, within B158DRAFT_0120at 117.556 kb on + strand, within B158DRAFT_0120at 117.564 kb on - strand, within B158DRAFT_0120at 117.571 kb on - strand, within B158DRAFT_0120at 117.574 kb on + strand, within B158DRAFT_0120at 117.581 kb on + strand, within B158DRAFT_0120at 117.588 kb on - strand, within B158DRAFT_0120at 117.646 kb on + strandat 117.646 kb on + strandat 117.654 kb on - strandat 117.654 kb on - strandat 117.654 kb on - strandat 117.654 kb on - strandat 117.654 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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115,212 - B158DRAFT_0117 0.10 -0.6
115,212 - B158DRAFT_0117 0.10 +0.1
115,212 - B158DRAFT_0117 0.10 +0.1
115,232 + B158DRAFT_0117 0.17 +8.9
115,258 - B158DRAFT_0117 0.25 +7.0
115,258 - B158DRAFT_0117 0.25 +6.8
115,270 + B158DRAFT_0117 0.29 +8.4
115,375 + B158DRAFT_0117 0.64 +8.2
115,383 - B158DRAFT_0117 0.67 +8.4
115,386 - B158DRAFT_0117 0.68 +8.2
115,432 + B158DRAFT_0117 0.83 +7.9
115,489 - -0.9
115,501 - -0.8
115,541 + +8.2
115,560 + B158DRAFT_0118 0.12 +8.6
115,610 + B158DRAFT_0118 0.19 +8.5
115,615 + B158DRAFT_0118 0.20 +8.4
115,615 + B158DRAFT_0118 0.20 +8.6
115,623 - B158DRAFT_0118 0.21 +5.7
115,630 + B158DRAFT_0118 0.22 +8.6
115,736 + B158DRAFT_0118 0.38 +8.3
115,736 + B158DRAFT_0118 0.38 +8.3
115,736 + B158DRAFT_0118 0.38 +8.8
115,749 + B158DRAFT_0118 0.40 +8.4
115,757 + B158DRAFT_0118 0.41 +8.3
115,758 - B158DRAFT_0118 0.41 +7.9
115,768 + B158DRAFT_0118 0.42 +8.1
115,824 - B158DRAFT_0118 0.51 +6.6
115,889 - B158DRAFT_0118 0.60 +7.5
115,905 + B158DRAFT_0118 0.62 +8.3
115,905 + B158DRAFT_0118 0.62 +8.2
115,905 + B158DRAFT_0118 0.62 +8.4
115,913 - B158DRAFT_0118 0.64 +7.6
115,913 - B158DRAFT_0118 0.64 +8.2
115,913 - B158DRAFT_0118 0.64 +8.6
115,913 - B158DRAFT_0118 0.64 +7.8
115,915 + B158DRAFT_0118 0.64 +8.5
115,954 - B158DRAFT_0118 0.70 +3.0
115,973 + B158DRAFT_0118 0.72 +8.6
115,978 + B158DRAFT_0118 0.73 +8.5
115,981 - B158DRAFT_0118 0.74 +8.4
115,981 - B158DRAFT_0118 0.74 +7.9
115,981 - B158DRAFT_0118 0.74 +8.5
116,031 - B158DRAFT_0118 0.81 +9.0
116,059 + B158DRAFT_0118 0.85 +8.5
116,067 - B158DRAFT_0118 0.86 +8.4
116,090 + B158DRAFT_0118 0.90 +8.4
116,098 + +8.5
116,119 - +8.6
116,155 + +7.8
116,199 - -1.2
116,201 + +8.1
116,387 + B158DRAFT_0119 0.37 +8.3
116,434 - B158DRAFT_0119 0.47 +8.6
116,482 - B158DRAFT_0119 0.57 +8.5
116,549 + B158DRAFT_0119 0.70 +8.4
116,549 + B158DRAFT_0119 0.70 +8.2
116,557 - B158DRAFT_0119 0.72 +8.9
116,568 - B158DRAFT_0119 0.74 +8.5
116,587 + B158DRAFT_0119 0.78 +8.3
116,587 + B158DRAFT_0119 0.78 +8.4
116,616 + B158DRAFT_0119 0.84 +8.6
116,616 + B158DRAFT_0119 0.84 +8.2
116,639 + B158DRAFT_0119 0.89 +8.7
116,697 - +5.9
116,729 - +8.0
116,745 + +8.7
116,786 - +8.6
116,801 - B158DRAFT_0120 0.11 +8.7
116,832 + B158DRAFT_0120 0.14 +8.3
116,832 + B158DRAFT_0120 0.14 +8.4
116,892 - B158DRAFT_0120 0.19 +8.2
116,937 - B158DRAFT_0120 0.24 +7.7
116,944 + B158DRAFT_0120 0.24 +9.0
116,949 - B158DRAFT_0120 0.25 +8.0
117,011 - B158DRAFT_0120 0.31 +8.4
117,024 - B158DRAFT_0120 0.32 +8.2
117,026 + B158DRAFT_0120 0.32 +8.5
117,034 - B158DRAFT_0120 0.33 +8.2
117,082 + B158DRAFT_0120 0.38 +8.5
117,090 - B158DRAFT_0120 0.38 +8.4
117,090 - B158DRAFT_0120 0.38 +8.6
117,092 + B158DRAFT_0120 0.39 +8.2
117,112 + B158DRAFT_0120 0.40 +8.5
117,189 + B158DRAFT_0120 0.48 +8.5
117,258 + B158DRAFT_0120 0.54 +8.3
117,259 - B158DRAFT_0120 0.55 +8.3
117,259 - B158DRAFT_0120 0.55 +8.3
117,259 - B158DRAFT_0120 0.55 +8.2
117,362 - B158DRAFT_0120 0.64 +8.2
117,383 + B158DRAFT_0120 0.66 +8.3
117,385 + B158DRAFT_0120 0.67 +8.5
117,385 + B158DRAFT_0120 0.67 +8.3
117,400 + B158DRAFT_0120 0.68 +8.6
117,400 + B158DRAFT_0120 0.68 +9.0
117,408 - B158DRAFT_0120 0.69 +8.4
117,435 + B158DRAFT_0120 0.71 +8.2
117,549 + B158DRAFT_0120 0.82 +8.2
117,556 + B158DRAFT_0120 0.83 +8.4
117,556 + B158DRAFT_0120 0.83 +8.4
117,556 + B158DRAFT_0120 0.83 +8.0
117,564 - B158DRAFT_0120 0.84 +8.5
117,571 - B158DRAFT_0120 0.85 +8.2
117,574 + B158DRAFT_0120 0.85 +8.5
117,581 + B158DRAFT_0120 0.85 +10.1
117,588 - B158DRAFT_0120 0.86 +8.3
117,646 + +8.5
117,646 + +8.4
117,654 - +8.5
117,654 - +8.5
117,654 - +8.0
117,654 - +8.9
117,654 - +8.5

Or see this region's nucleotide sequence