Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0114

Experiment: m.b. Sisomicin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0112 and B158DRAFT_0113 are separated by 462 nucleotidesB158DRAFT_0113 and B158DRAFT_0114 are separated by 324 nucleotidesB158DRAFT_0114 and B158DRAFT_0115 overlap by 4 nucleotides B158DRAFT_0112: B158DRAFT_0112 - Uncharacterized protein conserved in bacteria, at 108,835 to 109,287 _0112 B158DRAFT_0113: B158DRAFT_0113 - tRNA_Met_CAT, at 109,750 to 109,826 _0113 B158DRAFT_0114: B158DRAFT_0114 - NADH dehydrogenase subunit N (EC 1.6.5.3), at 110,151 to 111,581 _0114 B158DRAFT_0115: B158DRAFT_0115 - NADH dehydrogenase subunit M (EC 1.6.5.3), at 111,578 to 113,095 _0115 Position (kb) 110 111 112Strain fitness (log2 ratio) -1 0 1 2 3 4 5 6 7 8 9at 109.225 kb on - strand, within B158DRAFT_0112at 109.531 kb on + strandat 109.550 kb on + strandat 109.599 kb on - strandat 109.599 kb on - strandat 109.604 kb on - strandat 109.619 kb on - strandat 109.716 kb on + strandat 110.085 kb on - strandat 110.101 kb on - strandat 110.132 kb on + strandat 110.150 kb on - strandat 110.156 kb on - strandat 110.156 kb on - strandat 110.173 kb on + strandat 110.200 kb on - strandat 110.236 kb on - strandat 110.236 kb on - strandat 110.242 kb on + strandat 110.250 kb on - strandat 110.271 kb on - strandat 110.315 kb on + strand, within B158DRAFT_0114at 110.358 kb on + strand, within B158DRAFT_0114at 110.363 kb on + strand, within B158DRAFT_0114at 110.363 kb on + strand, within B158DRAFT_0114at 110.404 kb on + strand, within B158DRAFT_0114at 110.404 kb on + strand, within B158DRAFT_0114at 110.404 kb on + strand, within B158DRAFT_0114at 110.404 kb on + strand, within B158DRAFT_0114at 110.498 kb on + strand, within B158DRAFT_0114at 110.498 kb on + strand, within B158DRAFT_0114at 110.498 kb on + strand, within B158DRAFT_0114at 110.506 kb on + strand, within B158DRAFT_0114at 110.506 kb on + strand, within B158DRAFT_0114at 110.506 kb on - strand, within B158DRAFT_0114at 110.514 kb on - strand, within B158DRAFT_0114at 110.514 kb on - strand, within B158DRAFT_0114at 110.542 kb on + strand, within B158DRAFT_0114at 110.550 kb on - strand, within B158DRAFT_0114at 110.550 kb on - strand, within B158DRAFT_0114at 110.550 kb on - strand, within B158DRAFT_0114at 110.565 kb on + strand, within B158DRAFT_0114at 110.565 kb on + strand, within B158DRAFT_0114at 110.698 kb on + strand, within B158DRAFT_0114at 110.704 kb on + strand, within B158DRAFT_0114at 110.704 kb on + strand, within B158DRAFT_0114at 110.704 kb on + strand, within B158DRAFT_0114at 110.709 kb on + strand, within B158DRAFT_0114at 110.712 kb on - strand, within B158DRAFT_0114at 110.712 kb on - strand, within B158DRAFT_0114at 110.712 kb on - strand, within B158DRAFT_0114at 110.712 kb on - strand, within B158DRAFT_0114at 110.712 kb on - strand, within B158DRAFT_0114at 110.785 kb on + strand, within B158DRAFT_0114at 110.793 kb on - strand, within B158DRAFT_0114at 110.793 kb on - strand, within B158DRAFT_0114at 110.793 kb on - strand, within B158DRAFT_0114at 110.795 kb on + strand, within B158DRAFT_0114at 110.795 kb on + strand, within B158DRAFT_0114at 110.795 kb on + strand, within B158DRAFT_0114at 110.803 kb on - strand, within B158DRAFT_0114at 110.818 kb on + strand, within B158DRAFT_0114at 110.926 kb on + strand, within B158DRAFT_0114at 110.934 kb on - strand, within B158DRAFT_0114at 110.934 kb on - strand, within B158DRAFT_0114at 110.961 kb on + strand, within B158DRAFT_0114at 110.961 kb on + strand, within B158DRAFT_0114at 110.966 kb on + strand, within B158DRAFT_0114at 110.978 kb on + strand, within B158DRAFT_0114at 110.978 kb on + strand, within B158DRAFT_0114at 110.986 kb on - strand, within B158DRAFT_0114at 110.990 kb on + strand, within B158DRAFT_0114at 110.998 kb on - strand, within B158DRAFT_0114at 111.060 kb on - strand, within B158DRAFT_0114at 111.072 kb on + strand, within B158DRAFT_0114at 111.131 kb on + strand, within B158DRAFT_0114at 111.134 kb on - strand, within B158DRAFT_0114at 111.134 kb on - strand, within B158DRAFT_0114at 111.134 kb on - strand, within B158DRAFT_0114at 111.188 kb on + strand, within B158DRAFT_0114at 111.202 kb on - strand, within B158DRAFT_0114at 111.217 kb on + strand, within B158DRAFT_0114at 111.217 kb on + strand, within B158DRAFT_0114at 111.217 kb on + strand, within B158DRAFT_0114at 111.217 kb on + strand, within B158DRAFT_0114at 111.225 kb on - strand, within B158DRAFT_0114at 111.225 kb on - strand, within B158DRAFT_0114at 111.225 kb on - strand, within B158DRAFT_0114at 111.298 kb on + strand, within B158DRAFT_0114at 111.306 kb on - strand, within B158DRAFT_0114at 111.306 kb on - strand, within B158DRAFT_0114at 111.306 kb on - strand, within B158DRAFT_0114at 111.338 kb on - strand, within B158DRAFT_0114at 111.640 kb on + strandat 111.804 kb on - strand, within B158DRAFT_0115at 111.839 kb on - strand, within B158DRAFT_0115at 111.980 kb on + strand, within B158DRAFT_0115at 112.037 kb on + strand, within B158DRAFT_0115at 112.045 kb on - strand, within B158DRAFT_0115at 112.045 kb on - strand, within B158DRAFT_0115at 112.045 kb on - strand, within B158DRAFT_0115at 112.045 kb on - strand, within B158DRAFT_0115at 112.055 kb on - strand, within B158DRAFT_0115at 112.070 kb on + strand, within B158DRAFT_0115at 112.078 kb on - strand, within B158DRAFT_0115at 112.078 kb on - strand, within B158DRAFT_0115at 112.095 kb on + strand, within B158DRAFT_0115at 112.111 kb on + strand, within B158DRAFT_0115at 112.155 kb on + strand, within B158DRAFT_0115at 112.155 kb on + strand, within B158DRAFT_0115at 112.178 kb on - strand, within B158DRAFT_0115at 112.212 kb on + strand, within B158DRAFT_0115at 112.250 kb on + strand, within B158DRAFT_0115at 112.250 kb on + strand, within B158DRAFT_0115at 112.263 kb on - strand, within B158DRAFT_0115at 112.263 kb on - strand, within B158DRAFT_0115at 112.263 kb on - strand, within B158DRAFT_0115at 112.354 kb on + strand, within B158DRAFT_0115at 112.403 kb on + strand, within B158DRAFT_0115at 112.403 kb on + strand, within B158DRAFT_0115at 112.403 kb on + strand, within B158DRAFT_0115at 112.411 kb on - strand, within B158DRAFT_0115at 112.487 kb on + strand, within B158DRAFT_0115at 112.536 kb on + strand, within B158DRAFT_0115at 112.536 kb on + strand, within B158DRAFT_0115at 112.536 kb on + strand, within B158DRAFT_0115at 112.536 kb on + strand, within B158DRAFT_0115at 112.544 kb on - strand, within B158DRAFT_0115

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Sisomicin 0.025 mg/ml
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109,225 - B158DRAFT_0112 0.86 +0.4
109,531 + -0.2
109,550 + +0.3
109,599 - +2.0
109,599 - -0.5
109,604 - -0.1
109,619 - -0.2
109,716 + +0.6
110,085 - -0.3
110,101 - -0.7
110,132 + -0.3
110,150 - -1.3
110,156 - -0.7
110,156 - +1.0
110,173 + +6.0
110,200 - +7.9
110,236 - +8.3
110,236 - +8.4
110,242 + +8.2
110,250 - +8.5
110,271 - +6.7
110,315 + B158DRAFT_0114 0.11 +8.1
110,358 + B158DRAFT_0114 0.14 +8.6
110,363 + B158DRAFT_0114 0.15 +8.2
110,363 + B158DRAFT_0114 0.15 +8.3
110,404 + B158DRAFT_0114 0.18 +8.0
110,404 + B158DRAFT_0114 0.18 +8.6
110,404 + B158DRAFT_0114 0.18 +8.0
110,404 + B158DRAFT_0114 0.18 +8.2
110,498 + B158DRAFT_0114 0.24 +8.6
110,498 + B158DRAFT_0114 0.24 +8.3
110,498 + B158DRAFT_0114 0.24 +8.0
110,506 + B158DRAFT_0114 0.25 +8.1
110,506 + B158DRAFT_0114 0.25 +8.4
110,506 - B158DRAFT_0114 0.25 +8.2
110,514 - B158DRAFT_0114 0.25 +8.2
110,514 - B158DRAFT_0114 0.25 +8.3
110,542 + B158DRAFT_0114 0.27 +8.1
110,550 - B158DRAFT_0114 0.28 +8.3
110,550 - B158DRAFT_0114 0.28 +8.1
110,550 - B158DRAFT_0114 0.28 +8.2
110,565 + B158DRAFT_0114 0.29 +8.6
110,565 + B158DRAFT_0114 0.29 +8.7
110,698 + B158DRAFT_0114 0.38 +8.9
110,704 + B158DRAFT_0114 0.39 +8.6
110,704 + B158DRAFT_0114 0.39 +8.4
110,704 + B158DRAFT_0114 0.39 +8.4
110,709 + B158DRAFT_0114 0.39 +8.4
110,712 - B158DRAFT_0114 0.39 +8.4
110,712 - B158DRAFT_0114 0.39 +8.2
110,712 - B158DRAFT_0114 0.39 +7.9
110,712 - B158DRAFT_0114 0.39 +8.2
110,712 - B158DRAFT_0114 0.39 +8.6
110,785 + B158DRAFT_0114 0.44 +8.1
110,793 - B158DRAFT_0114 0.45 +7.5
110,793 - B158DRAFT_0114 0.45 +8.2
110,793 - B158DRAFT_0114 0.45 +8.2
110,795 + B158DRAFT_0114 0.45 +8.3
110,795 + B158DRAFT_0114 0.45 +8.4
110,795 + B158DRAFT_0114 0.45 +8.3
110,803 - B158DRAFT_0114 0.46 +9.2
110,818 + B158DRAFT_0114 0.47 +8.4
110,926 + B158DRAFT_0114 0.54 +8.1
110,934 - B158DRAFT_0114 0.55 +8.4
110,934 - B158DRAFT_0114 0.55 +8.4
110,961 + B158DRAFT_0114 0.57 +8.4
110,961 + B158DRAFT_0114 0.57 +8.2
110,966 + B158DRAFT_0114 0.57 +8.2
110,978 + B158DRAFT_0114 0.58 +8.2
110,978 + B158DRAFT_0114 0.58 +9.0
110,986 - B158DRAFT_0114 0.58 +8.5
110,990 + B158DRAFT_0114 0.59 +8.4
110,998 - B158DRAFT_0114 0.59 +8.2
111,060 - B158DRAFT_0114 0.64 +7.9
111,072 + B158DRAFT_0114 0.64 +8.1
111,131 + B158DRAFT_0114 0.68 +8.5
111,134 - B158DRAFT_0114 0.69 +8.4
111,134 - B158DRAFT_0114 0.69 +8.2
111,134 - B158DRAFT_0114 0.69 +8.1
111,188 + B158DRAFT_0114 0.72 +8.3
111,202 - B158DRAFT_0114 0.73 +8.0
111,217 + B158DRAFT_0114 0.74 +8.7
111,217 + B158DRAFT_0114 0.74 +8.5
111,217 + B158DRAFT_0114 0.74 +8.7
111,217 + B158DRAFT_0114 0.74 +8.3
111,225 - B158DRAFT_0114 0.75 +8.4
111,225 - B158DRAFT_0114 0.75 +8.3
111,225 - B158DRAFT_0114 0.75 +8.4
111,298 + B158DRAFT_0114 0.80 +8.3
111,306 - B158DRAFT_0114 0.81 +8.2
111,306 - B158DRAFT_0114 0.81 +8.6
111,306 - B158DRAFT_0114 0.81 +8.2
111,338 - B158DRAFT_0114 0.83 +8.6
111,640 + +8.2
111,804 - B158DRAFT_0115 0.15 +7.1
111,839 - B158DRAFT_0115 0.17 +6.7
111,980 + B158DRAFT_0115 0.26 +8.6
112,037 + B158DRAFT_0115 0.30 +8.2
112,045 - B158DRAFT_0115 0.31 +7.0
112,045 - B158DRAFT_0115 0.31 +7.3
112,045 - B158DRAFT_0115 0.31 +1.3
112,045 - B158DRAFT_0115 0.31 +6.7
112,055 - B158DRAFT_0115 0.31 +6.8
112,070 + B158DRAFT_0115 0.32 +8.2
112,078 - B158DRAFT_0115 0.33 +6.3
112,078 - B158DRAFT_0115 0.33 +8.0
112,095 + B158DRAFT_0115 0.34 +8.2
112,111 + B158DRAFT_0115 0.35 +8.1
112,155 + B158DRAFT_0115 0.38 +8.1
112,155 + B158DRAFT_0115 0.38 +8.1
112,178 - B158DRAFT_0115 0.40 +6.6
112,212 + B158DRAFT_0115 0.42 +8.0
112,250 + B158DRAFT_0115 0.44 +8.1
112,250 + B158DRAFT_0115 0.44 +8.3
112,263 - B158DRAFT_0115 0.45 +6.9
112,263 - B158DRAFT_0115 0.45 +6.8
112,263 - B158DRAFT_0115 0.45 +6.9
112,354 + B158DRAFT_0115 0.51 +8.4
112,403 + B158DRAFT_0115 0.54 +8.3
112,403 + B158DRAFT_0115 0.54 +8.4
112,403 + B158DRAFT_0115 0.54 +8.3
112,411 - B158DRAFT_0115 0.55 +7.2
112,487 + B158DRAFT_0115 0.60 +8.0
112,536 + B158DRAFT_0115 0.63 +8.2
112,536 + B158DRAFT_0115 0.63 +8.2
112,536 + B158DRAFT_0115 0.63 +7.8
112,536 + B158DRAFT_0115 0.63 +8.3
112,544 - B158DRAFT_0115 0.64 +6.4

Or see this region's nucleotide sequence