Experiment: m.b. nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2419 and B158DRAFT_2420 overlap by 4 nucleotides B158DRAFT_2420 and B158DRAFT_2421 are separated by 4 nucleotides B158DRAFT_2421 and B158DRAFT_2422 are separated by 11 nucleotides
B158DRAFT_2419: B158DRAFT_2419 - type IV pilus modification protein PilV, at 590,559 to 591,152
_2419
B158DRAFT_2420: B158DRAFT_2420 - prepilin-type N-terminal cleavage/methylation domain, at 591,149 to 591,949
_2420
B158DRAFT_2421: B158DRAFT_2421 - hypothetical protein, at 591,954 to 592,511
_2421
B158DRAFT_2422: B158DRAFT_2422 - Tfp pilus assembly protein, tip-associated adhesin PilY1, at 592,523 to 595,474
_2422
Position (kb) 591
592
593 Strain fitness (log2 ratio) -1
0
1
2 at 591.006 kb on - strand, within B158DRAFT_2419 at 591.246 kb on - strand, within B158DRAFT_2420 at 591.359 kb on + strand, within B158DRAFT_2420 at 591.367 kb on - strand, within B158DRAFT_2420 at 591.380 kb on + strand, within B158DRAFT_2420 at 591.421 kb on + strand, within B158DRAFT_2420 at 591.520 kb on + strand, within B158DRAFT_2420 at 591.522 kb on + strand, within B158DRAFT_2420 at 591.522 kb on + strand, within B158DRAFT_2420 at 591.522 kb on + strand, within B158DRAFT_2420 at 591.530 kb on - strand, within B158DRAFT_2420 at 591.530 kb on - strand, within B158DRAFT_2420 at 591.543 kb on - strand, within B158DRAFT_2420 at 591.612 kb on - strand, within B158DRAFT_2420 at 591.842 kb on + strand, within B158DRAFT_2420 at 591.842 kb on + strand, within B158DRAFT_2420 at 591.842 kb on + strand, within B158DRAFT_2420 at 591.850 kb on - strand, within B158DRAFT_2420 at 591.851 kb on - strand, within B158DRAFT_2420 at 592.084 kb on + strand, within B158DRAFT_2421 at 592.157 kb on - strand, within B158DRAFT_2421 at 592.226 kb on - strand, within B158DRAFT_2421 at 592.258 kb on + strand, within B158DRAFT_2421 at 592.271 kb on + strand, within B158DRAFT_2421 at 592.343 kb on - strand, within B158DRAFT_2421 at 592.483 kb on - strand at 592.506 kb on + strand at 592.563 kb on - strand at 592.621 kb on + strand at 592.629 kb on - strand at 592.629 kb on - strand at 592.684 kb on + strand at 592.700 kb on - strand at 592.904 kb on - strand, within B158DRAFT_2422 at 592.963 kb on + strand, within B158DRAFT_2422 at 592.971 kb on - strand, within B158DRAFT_2422 at 593.201 kb on - strand, within B158DRAFT_2422 at 593.201 kb on - strand, within B158DRAFT_2422 at 593.201 kb on - strand, within B158DRAFT_2422 at 593.211 kb on - strand, within B158DRAFT_2422 at 593.211 kb on - strand, within B158DRAFT_2422 at 593.326 kb on + strand, within B158DRAFT_2422
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM remove 591,006 - B158DRAFT_2419 0.75 +0.3 591,246 - B158DRAFT_2420 0.12 +0.4 591,359 + B158DRAFT_2420 0.26 +0.9 591,367 - B158DRAFT_2420 0.27 -0.4 591,380 + B158DRAFT_2420 0.29 -0.4 591,421 + B158DRAFT_2420 0.34 +0.7 591,520 + B158DRAFT_2420 0.46 -1.1 591,522 + B158DRAFT_2420 0.47 -0.3 591,522 + B158DRAFT_2420 0.47 +0.2 591,522 + B158DRAFT_2420 0.47 -0.1 591,530 - B158DRAFT_2420 0.48 +0.1 591,530 - B158DRAFT_2420 0.48 +1.0 591,543 - B158DRAFT_2420 0.49 -0.3 591,612 - B158DRAFT_2420 0.58 +0.1 591,842 + B158DRAFT_2420 0.87 +0.2 591,842 + B158DRAFT_2420 0.87 -0.3 591,842 + B158DRAFT_2420 0.87 +0.6 591,850 - B158DRAFT_2420 0.88 +1.1 591,851 - B158DRAFT_2420 0.88 -0.3 592,084 + B158DRAFT_2421 0.23 +0.3 592,157 - B158DRAFT_2421 0.36 -0.2 592,226 - B158DRAFT_2421 0.49 -0.6 592,258 + B158DRAFT_2421 0.54 -0.2 592,271 + B158DRAFT_2421 0.57 +0.4 592,343 - B158DRAFT_2421 0.70 +0.9 592,483 - +1.5 592,506 + +0.4 592,563 - -0.7 592,621 + +0.6 592,629 - -0.3 592,629 - +2.1 592,684 + -0.3 592,700 - -0.8 592,904 - B158DRAFT_2422 0.13 -1.2 592,963 + B158DRAFT_2422 0.15 -0.1 592,971 - B158DRAFT_2422 0.15 -0.2 593,201 - B158DRAFT_2422 0.23 +0.2 593,201 - B158DRAFT_2422 0.23 +0.2 593,201 - B158DRAFT_2422 0.23 -0.2 593,211 - B158DRAFT_2422 0.23 +0.3 593,211 - B158DRAFT_2422 0.23 +0.1 593,326 + B158DRAFT_2422 0.27 -0.3
Or see this region's nucleotide sequence