Experiment: m.b. nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2377 and B158DRAFT_2378 are separated by 93 nucleotides B158DRAFT_2378 and B158DRAFT_2379 are separated by 42 nucleotides B158DRAFT_2379 and B158DRAFT_2380 are separated by 178 nucleotides
B158DRAFT_2377: B158DRAFT_2377 - gamma-glutamyltranspeptidase, at 547,056 to 548,792
_2377
B158DRAFT_2378: B158DRAFT_2378 - hypothetical protein, at 548,886 to 549,395
_2378
B158DRAFT_2379: B158DRAFT_2379 - methionyl-tRNA synthetase (EC 6.1.1.10), at 549,438 to 551,462
_2379
B158DRAFT_2380: B158DRAFT_2380 - ATPases involved in chromosome partitioning, at 551,641 to 552,729
_2380
Position (kb) 549
550
551
552 Strain fitness (log2 ratio) -2
-1
0
1 at 548.457 kb on - strand, within B158DRAFT_2377 at 548.579 kb on + strand, within B158DRAFT_2377 at 548.652 kb on - strand at 548.663 kb on + strand at 548.685 kb on - strand at 548.705 kb on + strand at 548.705 kb on + strand at 548.710 kb on + strand at 548.713 kb on - strand at 548.713 kb on - strand at 548.713 kb on - strand at 548.713 kb on - strand at 548.713 kb on - strand at 548.713 kb on - strand at 548.713 kb on - strand at 548.713 kb on - strand at 548.721 kb on + strand at 548.908 kb on + strand at 548.921 kb on - strand at 548.933 kb on + strand at 549.315 kb on + strand, within B158DRAFT_2378 at 549.315 kb on + strand, within B158DRAFT_2378 at 551.631 kb on + strand at 551.631 kb on + strand at 551.631 kb on + strand at 551.631 kb on + strand at 551.631 kb on + strand at 551.631 kb on + strand at 551.631 kb on + strand at 551.631 kb on + strand at 551.631 kb on + strand at 551.631 kb on + strand at 551.631 kb on + strand at 551.631 kb on + strand at 551.631 kb on + strand at 551.636 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM remove 548,457 - B158DRAFT_2377 0.81 -0.0 548,579 + B158DRAFT_2377 0.88 -0.6 548,652 - -0.5 548,663 + -0.4 548,685 - +0.1 548,705 + -0.2 548,705 + -1.1 548,710 + -0.5 548,713 - -0.8 548,713 - -0.2 548,713 - -2.4 548,713 - +0.9 548,713 - -0.2 548,713 - +0.2 548,713 - +0.5 548,713 - -0.8 548,721 + +0.3 548,908 + -1.2 548,921 - -1.5 548,933 + +0.1 549,315 + B158DRAFT_2378 0.84 -2.0 549,315 + B158DRAFT_2378 0.84 -0.2 551,631 + -0.2 551,631 + +0.4 551,631 + +0.0 551,631 + -0.1 551,631 + +0.9 551,631 + -1.8 551,631 + -0.0 551,631 + +1.2 551,631 + -0.9 551,631 + +0.3 551,631 + +0.0 551,631 + -0.2 551,631 + +0.4 551,636 + -0.6
Or see this region's nucleotide sequence