Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2377

Experiment: m.b. nitrate 200 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2375 and B158DRAFT_2376 are separated by 7 nucleotidesB158DRAFT_2376 and B158DRAFT_2377 are separated by 258 nucleotidesB158DRAFT_2377 and B158DRAFT_2378 are separated by 93 nucleotidesB158DRAFT_2378 and B158DRAFT_2379 are separated by 42 nucleotides B158DRAFT_2375: B158DRAFT_2375 - Collagenase and related proteases, at 545,519 to 546,508 _2375 B158DRAFT_2376: B158DRAFT_2376 - Chorismate mutase, at 546,516 to 546,797 _2376 B158DRAFT_2377: B158DRAFT_2377 - gamma-glutamyltranspeptidase, at 547,056 to 548,792 _2377 B158DRAFT_2378: B158DRAFT_2378 - hypothetical protein, at 548,886 to 549,395 _2378 B158DRAFT_2379: B158DRAFT_2379 - methionyl-tRNA synthetase (EC 6.1.1.10), at 549,438 to 551,462 _2379 Position (kb) 547 548 549Strain fitness (log2 ratio) -3 -2 -1 0 1at 546.057 kb on + strand, within B158DRAFT_2375at 546.086 kb on + strand, within B158DRAFT_2375at 546.086 kb on + strand, within B158DRAFT_2375at 546.086 kb on + strand, within B158DRAFT_2375at 546.086 kb on + strand, within B158DRAFT_2375at 546.086 kb on + strand, within B158DRAFT_2375at 546.086 kb on + strand, within B158DRAFT_2375at 546.086 kb on + strand, within B158DRAFT_2375at 546.094 kb on - strand, within B158DRAFT_2375at 546.094 kb on - strand, within B158DRAFT_2375at 546.094 kb on - strand, within B158DRAFT_2375at 546.094 kb on - strand, within B158DRAFT_2375at 546.155 kb on + strand, within B158DRAFT_2375at 546.208 kb on - strand, within B158DRAFT_2375at 546.208 kb on - strand, within B158DRAFT_2375at 546.394 kb on - strand, within B158DRAFT_2375at 546.470 kb on - strandat 546.485 kb on - strandat 546.514 kb on + strandat 546.545 kb on + strand, within B158DRAFT_2376at 546.553 kb on - strand, within B158DRAFT_2376at 546.583 kb on + strand, within B158DRAFT_2376at 546.591 kb on - strand, within B158DRAFT_2376at 546.591 kb on - strand, within B158DRAFT_2376at 546.716 kb on + strand, within B158DRAFT_2376at 546.777 kb on + strandat 546.825 kb on - strandat 546.926 kb on + strandat 546.934 kb on - strandat 546.935 kb on - strandat 546.989 kb on + strandat 546.989 kb on + strandat 546.997 kb on - strandat 546.997 kb on - strandat 547.011 kb on + strandat 547.011 kb on + strandat 547.011 kb on + strandat 547.011 kb on + strandat 547.011 kb on + strandat 547.011 kb on + strandat 547.011 kb on + strandat 547.011 kb on + strandat 547.011 kb on + strandat 547.011 kb on + strandat 547.011 kb on + strandat 547.011 kb on + strandat 547.019 kb on - strandat 547.019 kb on - strandat 547.019 kb on - strandat 547.019 kb on - strandat 547.019 kb on - strandat 547.019 kb on - strandat 547.019 kb on - strandat 547.085 kb on - strandat 547.085 kb on - strandat 547.099 kb on + strandat 547.112 kb on - strandat 547.129 kb on + strandat 547.144 kb on - strandat 547.228 kb on - strandat 547.239 kb on - strand, within B158DRAFT_2377at 547.311 kb on + strand, within B158DRAFT_2377at 547.311 kb on + strand, within B158DRAFT_2377at 547.319 kb on - strand, within B158DRAFT_2377at 547.319 kb on - strand, within B158DRAFT_2377at 547.319 kb on - strand, within B158DRAFT_2377at 547.334 kb on + strand, within B158DRAFT_2377at 547.339 kb on - strand, within B158DRAFT_2377at 547.361 kb on - strand, within B158DRAFT_2377at 547.368 kb on - strand, within B158DRAFT_2377at 547.395 kb on - strand, within B158DRAFT_2377at 547.482 kb on + strand, within B158DRAFT_2377at 547.488 kb on - strand, within B158DRAFT_2377at 547.499 kb on + strand, within B158DRAFT_2377at 547.499 kb on + strand, within B158DRAFT_2377at 547.502 kb on - strand, within B158DRAFT_2377at 547.515 kb on + strand, within B158DRAFT_2377at 547.515 kb on + strand, within B158DRAFT_2377at 547.515 kb on + strand, within B158DRAFT_2377at 547.597 kb on + strand, within B158DRAFT_2377at 547.731 kb on + strand, within B158DRAFT_2377at 547.731 kb on + strand, within B158DRAFT_2377at 547.731 kb on + strand, within B158DRAFT_2377at 547.739 kb on - strand, within B158DRAFT_2377at 547.815 kb on + strand, within B158DRAFT_2377at 547.826 kb on + strand, within B158DRAFT_2377at 547.826 kb on + strand, within B158DRAFT_2377at 547.833 kb on + strand, within B158DRAFT_2377at 547.834 kb on - strand, within B158DRAFT_2377at 547.841 kb on - strand, within B158DRAFT_2377at 547.913 kb on + strand, within B158DRAFT_2377at 548.035 kb on - strand, within B158DRAFT_2377at 548.035 kb on - strand, within B158DRAFT_2377at 548.081 kb on - strand, within B158DRAFT_2377at 548.152 kb on + strand, within B158DRAFT_2377at 548.152 kb on + strand, within B158DRAFT_2377at 548.152 kb on - strand, within B158DRAFT_2377at 548.160 kb on - strand, within B158DRAFT_2377at 548.162 kb on + strand, within B158DRAFT_2377at 548.162 kb on + strand, within B158DRAFT_2377at 548.170 kb on - strand, within B158DRAFT_2377at 548.170 kb on - strand, within B158DRAFT_2377at 548.241 kb on + strand, within B158DRAFT_2377at 548.241 kb on + strand, within B158DRAFT_2377at 548.255 kb on + strand, within B158DRAFT_2377at 548.257 kb on + strand, within B158DRAFT_2377at 548.263 kb on - strand, within B158DRAFT_2377at 548.267 kb on + strand, within B158DRAFT_2377at 548.267 kb on + strand, within B158DRAFT_2377at 548.267 kb on + strand, within B158DRAFT_2377at 548.275 kb on - strand, within B158DRAFT_2377at 548.366 kb on + strand, within B158DRAFT_2377at 548.366 kb on + strand, within B158DRAFT_2377at 548.366 kb on + strand, within B158DRAFT_2377at 548.374 kb on - strand, within B158DRAFT_2377at 548.374 kb on - strand, within B158DRAFT_2377at 548.374 kb on - strand, within B158DRAFT_2377at 548.376 kb on + strand, within B158DRAFT_2377at 548.457 kb on - strand, within B158DRAFT_2377at 548.579 kb on + strand, within B158DRAFT_2377at 548.652 kb on - strandat 548.663 kb on + strandat 548.685 kb on - strandat 548.705 kb on + strandat 548.705 kb on + strandat 548.710 kb on + strandat 548.713 kb on - strandat 548.713 kb on - strandat 548.713 kb on - strandat 548.713 kb on - strandat 548.713 kb on - strandat 548.713 kb on - strandat 548.713 kb on - strandat 548.713 kb on - strandat 548.721 kb on + strandat 548.908 kb on + strandat 548.921 kb on - strandat 548.933 kb on + strandat 549.315 kb on + strand, within B158DRAFT_2378at 549.315 kb on + strand, within B158DRAFT_2378

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM
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546,057 + B158DRAFT_2375 0.54 +0.6
546,086 + B158DRAFT_2375 0.57 -0.9
546,086 + B158DRAFT_2375 0.57 -0.7
546,086 + B158DRAFT_2375 0.57 -0.5
546,086 + B158DRAFT_2375 0.57 +0.2
546,086 + B158DRAFT_2375 0.57 -0.9
546,086 + B158DRAFT_2375 0.57 -1.7
546,086 + B158DRAFT_2375 0.57 -1.3
546,094 - B158DRAFT_2375 0.58 +0.8
546,094 - B158DRAFT_2375 0.58 -0.9
546,094 - B158DRAFT_2375 0.58 -1.4
546,094 - B158DRAFT_2375 0.58 -0.2
546,155 + B158DRAFT_2375 0.64 -0.2
546,208 - B158DRAFT_2375 0.70 -0.8
546,208 - B158DRAFT_2375 0.70 +0.0
546,394 - B158DRAFT_2375 0.88 -0.4
546,470 - -0.8
546,485 - -0.4
546,514 + +0.7
546,545 + B158DRAFT_2376 0.10 +0.1
546,553 - B158DRAFT_2376 0.13 +0.3
546,583 + B158DRAFT_2376 0.24 -0.2
546,591 - B158DRAFT_2376 0.27 +0.1
546,591 - B158DRAFT_2376 0.27 +0.1
546,716 + B158DRAFT_2376 0.71 +0.1
546,777 + -0.3
546,825 - -0.5
546,926 + -0.8
546,934 - -0.6
546,935 - -0.4
546,989 + +0.2
546,989 + +0.0
546,997 - +0.0
546,997 - +0.5
547,011 + +0.1
547,011 + -0.1
547,011 + -0.3
547,011 + +0.3
547,011 + -0.8
547,011 + +0.7
547,011 + +0.5
547,011 + +0.5
547,011 + -1.0
547,011 + +0.5
547,011 + -0.2
547,011 + +0.1
547,019 - +0.4
547,019 - +0.2
547,019 - -0.8
547,019 - +0.6
547,019 - -0.2
547,019 - -0.2
547,019 - -0.1
547,085 - -0.1
547,085 - -0.9
547,099 + +0.2
547,112 - -0.7
547,129 + -0.7
547,144 - -0.3
547,228 - +0.1
547,239 - B158DRAFT_2377 0.11 +0.0
547,311 + B158DRAFT_2377 0.15 -0.4
547,311 + B158DRAFT_2377 0.15 -0.5
547,319 - B158DRAFT_2377 0.15 +0.4
547,319 - B158DRAFT_2377 0.15 +0.6
547,319 - B158DRAFT_2377 0.15 +0.5
547,334 + B158DRAFT_2377 0.16 -0.1
547,339 - B158DRAFT_2377 0.16 -0.3
547,361 - B158DRAFT_2377 0.18 +0.4
547,368 - B158DRAFT_2377 0.18 -0.7
547,395 - B158DRAFT_2377 0.20 -2.9
547,482 + B158DRAFT_2377 0.25 -0.2
547,488 - B158DRAFT_2377 0.25 -0.7
547,499 + B158DRAFT_2377 0.26 -0.9
547,499 + B158DRAFT_2377 0.26 -0.1
547,502 - B158DRAFT_2377 0.26 -0.3
547,515 + B158DRAFT_2377 0.26 +0.1
547,515 + B158DRAFT_2377 0.26 -0.6
547,515 + B158DRAFT_2377 0.26 -0.9
547,597 + B158DRAFT_2377 0.31 +0.5
547,731 + B158DRAFT_2377 0.39 -1.2
547,731 + B158DRAFT_2377 0.39 +0.2
547,731 + B158DRAFT_2377 0.39 +0.2
547,739 - B158DRAFT_2377 0.39 +0.3
547,815 + B158DRAFT_2377 0.44 -1.1
547,826 + B158DRAFT_2377 0.44 +0.4
547,826 + B158DRAFT_2377 0.44 -0.0
547,833 + B158DRAFT_2377 0.45 -1.1
547,834 - B158DRAFT_2377 0.45 +0.1
547,841 - B158DRAFT_2377 0.45 +0.2
547,913 + B158DRAFT_2377 0.49 +0.4
548,035 - B158DRAFT_2377 0.56 -0.5
548,035 - B158DRAFT_2377 0.56 -0.9
548,081 - B158DRAFT_2377 0.59 +0.6
548,152 + B158DRAFT_2377 0.63 -1.2
548,152 + B158DRAFT_2377 0.63 -0.6
548,152 - B158DRAFT_2377 0.63 +1.1
548,160 - B158DRAFT_2377 0.64 -0.2
548,162 + B158DRAFT_2377 0.64 -1.1
548,162 + B158DRAFT_2377 0.64 +0.1
548,170 - B158DRAFT_2377 0.64 +0.2
548,170 - B158DRAFT_2377 0.64 +0.1
548,241 + B158DRAFT_2377 0.68 +0.4
548,241 + B158DRAFT_2377 0.68 +0.2
548,255 + B158DRAFT_2377 0.69 -0.1
548,257 + B158DRAFT_2377 0.69 -0.1
548,263 - B158DRAFT_2377 0.69 -0.5
548,267 + B158DRAFT_2377 0.70 -0.0
548,267 + B158DRAFT_2377 0.70 -0.5
548,267 + B158DRAFT_2377 0.70 +0.5
548,275 - B158DRAFT_2377 0.70 -0.1
548,366 + B158DRAFT_2377 0.75 -0.1
548,366 + B158DRAFT_2377 0.75 -1.1
548,366 + B158DRAFT_2377 0.75 -0.6
548,374 - B158DRAFT_2377 0.76 -0.3
548,374 - B158DRAFT_2377 0.76 +0.1
548,374 - B158DRAFT_2377 0.76 -0.7
548,376 + B158DRAFT_2377 0.76 +1.3
548,457 - B158DRAFT_2377 0.81 -0.0
548,579 + B158DRAFT_2377 0.88 -0.6
548,652 - -0.5
548,663 + -0.4
548,685 - +0.1
548,705 + -0.2
548,705 + -1.1
548,710 + -0.5
548,713 - -0.8
548,713 - -0.2
548,713 - -2.4
548,713 - +0.9
548,713 - -0.2
548,713 - +0.2
548,713 - +0.5
548,713 - -0.8
548,721 + +0.3
548,908 + -1.2
548,921 - -1.5
548,933 + +0.1
549,315 + B158DRAFT_2378 0.84 -2.0
549,315 + B158DRAFT_2378 0.84 -0.2

Or see this region's nucleotide sequence