Experiment: m.b. nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2237 and B158DRAFT_2238 are separated by 252 nucleotides B158DRAFT_2238 and B158DRAFT_2239 are separated by 86 nucleotides
B158DRAFT_2237: B158DRAFT_2237 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 390,629 to 394,015
_2237
B158DRAFT_2238: B158DRAFT_2238 - Small-conductance mechanosensitive channel, at 394,268 to 395,572
_2238
B158DRAFT_2239: B158DRAFT_2239 - peptide chain release factor 3, at 395,659 to 397,248
_2239
Position (kb) 394
395
396 Strain fitness (log2 ratio) -2
-1
0
1 at 393.302 kb on + strand, within B158DRAFT_2237 at 393.376 kb on + strand, within B158DRAFT_2237 at 393.384 kb on + strand, within B158DRAFT_2237 at 393.386 kb on + strand, within B158DRAFT_2237 at 393.394 kb on - strand, within B158DRAFT_2237 at 393.394 kb on - strand, within B158DRAFT_2237 at 393.454 kb on + strand, within B158DRAFT_2237 at 393.462 kb on - strand, within B158DRAFT_2237 at 393.481 kb on + strand, within B158DRAFT_2237 at 393.481 kb on + strand, within B158DRAFT_2237 at 393.481 kb on + strand, within B158DRAFT_2237 at 393.481 kb on + strand, within B158DRAFT_2237 at 393.481 kb on + strand, within B158DRAFT_2237 at 393.481 kb on + strand, within B158DRAFT_2237 at 393.481 kb on + strand, within B158DRAFT_2237 at 393.481 kb on + strand, within B158DRAFT_2237 at 393.481 kb on + strand, within B158DRAFT_2237 at 393.481 kb on + strand, within B158DRAFT_2237 at 393.481 kb on + strand, within B158DRAFT_2237 at 393.481 kb on + strand, within B158DRAFT_2237 at 393.481 kb on + strand, within B158DRAFT_2237 at 393.481 kb on + strand, within B158DRAFT_2237 at 393.489 kb on - strand, within B158DRAFT_2237 at 393.489 kb on - strand, within B158DRAFT_2237 at 393.489 kb on - strand, within B158DRAFT_2237 at 393.489 kb on - strand, within B158DRAFT_2237 at 393.489 kb on - strand, within B158DRAFT_2237 at 393.515 kb on - strand, within B158DRAFT_2237 at 393.540 kb on + strand, within B158DRAFT_2237 at 393.540 kb on + strand, within B158DRAFT_2237 at 393.548 kb on - strand, within B158DRAFT_2237 at 393.548 kb on - strand, within B158DRAFT_2237 at 393.548 kb on - strand, within B158DRAFT_2237 at 393.562 kb on + strand, within B158DRAFT_2237 at 393.570 kb on - strand, within B158DRAFT_2237 at 393.570 kb on - strand, within B158DRAFT_2237 at 393.570 kb on - strand, within B158DRAFT_2237 at 393.641 kb on - strand, within B158DRAFT_2237 at 393.734 kb on + strand at 393.784 kb on + strand at 393.784 kb on + strand at 393.792 kb on - strand at 393.877 kb on - strand at 393.877 kb on - strand at 393.897 kb on - strand at 393.897 kb on - strand at 393.903 kb on - strand at 393.903 kb on - strand at 393.907 kb on + strand at 393.915 kb on - strand at 393.915 kb on - strand at 393.917 kb on + strand at 393.918 kb on + strand at 393.923 kb on + strand at 393.923 kb on + strand at 393.931 kb on - strand at 393.965 kb on + strand at 393.967 kb on - strand at 393.979 kb on + strand at 393.979 kb on + strand at 393.986 kb on + strand at 393.986 kb on + strand at 393.987 kb on - strand at 393.987 kb on - strand at 393.987 kb on - strand at 393.987 kb on - strand at 393.994 kb on - strand at 393.996 kb on + strand at 393.996 kb on + strand at 393.996 kb on + strand at 393.996 kb on + strand at 393.996 kb on + strand at 393.996 kb on + strand at 393.996 kb on + strand at 393.996 kb on + strand at 394.004 kb on - strand at 394.004 kb on - strand at 394.004 kb on - strand at 394.004 kb on - strand at 394.004 kb on - strand at 394.032 kb on - strand at 394.040 kb on - strand at 394.045 kb on - strand at 394.045 kb on - strand at 394.064 kb on + strand at 394.099 kb on - strand at 394.131 kb on + strand at 394.141 kb on + strand at 394.154 kb on + strand at 394.154 kb on + strand at 394.162 kb on - strand at 394.162 kb on - strand at 394.224 kb on - strand at 394.250 kb on - strand at 394.340 kb on + strand at 394.348 kb on - strand at 394.355 kb on + strand at 394.355 kb on + strand at 394.390 kb on - strand at 394.525 kb on + strand, within B158DRAFT_2238 at 394.525 kb on + strand, within B158DRAFT_2238 at 394.533 kb on - strand, within B158DRAFT_2238 at 394.533 kb on - strand, within B158DRAFT_2238 at 394.582 kb on - strand, within B158DRAFT_2238 at 394.665 kb on + strand, within B158DRAFT_2238 at 394.688 kb on + strand, within B158DRAFT_2238 at 394.720 kb on - strand, within B158DRAFT_2238 at 394.768 kb on + strand, within B158DRAFT_2238 at 394.786 kb on + strand, within B158DRAFT_2238 at 394.794 kb on + strand, within B158DRAFT_2238 at 394.794 kb on + strand, within B158DRAFT_2238 at 394.807 kb on - strand, within B158DRAFT_2238 at 394.821 kb on - strand, within B158DRAFT_2238 at 394.952 kb on + strand, within B158DRAFT_2238 at 394.969 kb on + strand, within B158DRAFT_2238 at 395.028 kb on + strand, within B158DRAFT_2238 at 395.028 kb on + strand, within B158DRAFT_2238 at 395.035 kb on + strand, within B158DRAFT_2238 at 395.053 kb on + strand, within B158DRAFT_2238 at 395.061 kb on - strand, within B158DRAFT_2238 at 395.061 kb on - strand, within B158DRAFT_2238 at 395.074 kb on - strand, within B158DRAFT_2238 at 395.095 kb on - strand, within B158DRAFT_2238 at 395.142 kb on + strand, within B158DRAFT_2238 at 395.300 kb on + strand, within B158DRAFT_2238 at 395.308 kb on - strand, within B158DRAFT_2238 at 395.331 kb on - strand, within B158DRAFT_2238 at 395.451 kb on + strand at 395.451 kb on + strand at 395.478 kb on + strand at 395.492 kb on + strand at 395.492 kb on + strand at 395.584 kb on - strand at 395.584 kb on - strand at 395.591 kb on - strand at 395.591 kb on - strand at 395.620 kb on + strand at 395.669 kb on - strand at 395.693 kb on - strand at 395.761 kb on + strand at 395.761 kb on + strand at 395.781 kb on + strand at 395.785 kb on + strand at 395.808 kb on - strand at 395.828 kb on - strand, within B158DRAFT_2239 at 395.837 kb on + strand, within B158DRAFT_2239 at 395.837 kb on + strand, within B158DRAFT_2239 at 395.845 kb on - strand, within B158DRAFT_2239 at 395.889 kb on + strand, within B158DRAFT_2239 at 395.894 kb on - strand, within B158DRAFT_2239 at 395.943 kb on - strand, within B158DRAFT_2239 at 395.958 kb on - strand, within B158DRAFT_2239 at 396.006 kb on + strand, within B158DRAFT_2239 at 396.006 kb on + strand, within B158DRAFT_2239 at 396.006 kb on + strand, within B158DRAFT_2239 at 396.014 kb on - strand, within B158DRAFT_2239 at 396.014 kb on - strand, within B158DRAFT_2239 at 396.014 kb on - strand, within B158DRAFT_2239 at 396.014 kb on - strand, within B158DRAFT_2239 at 396.037 kb on - strand, within B158DRAFT_2239 at 396.065 kb on + strand, within B158DRAFT_2239 at 396.065 kb on - strand, within B158DRAFT_2239 at 396.168 kb on + strand, within B158DRAFT_2239 at 396.187 kb on + strand, within B158DRAFT_2239 at 396.195 kb on + strand, within B158DRAFT_2239 at 396.195 kb on + strand, within B158DRAFT_2239 at 396.195 kb on + strand, within B158DRAFT_2239 at 396.195 kb on + strand, within B158DRAFT_2239 at 396.195 kb on + strand, within B158DRAFT_2239 at 396.195 kb on + strand, within B158DRAFT_2239 at 396.195 kb on + strand, within B158DRAFT_2239 at 396.195 kb on - strand, within B158DRAFT_2239 at 396.203 kb on - strand, within B158DRAFT_2239 at 396.203 kb on - strand, within B158DRAFT_2239 at 396.211 kb on - strand, within B158DRAFT_2239 at 396.250 kb on - strand, within B158DRAFT_2239 at 396.269 kb on - strand, within B158DRAFT_2239 at 396.271 kb on - strand, within B158DRAFT_2239 at 396.278 kb on + strand, within B158DRAFT_2239 at 396.286 kb on + strand, within B158DRAFT_2239 at 396.294 kb on - strand, within B158DRAFT_2239 at 396.346 kb on + strand, within B158DRAFT_2239 at 396.357 kb on + strand, within B158DRAFT_2239 at 396.474 kb on + strand, within B158DRAFT_2239 at 396.482 kb on - strand, within B158DRAFT_2239 at 396.493 kb on + strand, within B158DRAFT_2239 at 396.501 kb on - strand, within B158DRAFT_2239 at 396.516 kb on - strand, within B158DRAFT_2239 at 396.517 kb on + strand, within B158DRAFT_2239 at 396.521 kb on + strand, within B158DRAFT_2239 at 396.524 kb on - strand, within B158DRAFT_2239 at 396.524 kb on - strand, within B158DRAFT_2239
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM remove 393,302 + B158DRAFT_2237 0.79 -0.4 393,376 + B158DRAFT_2237 0.81 -0.8 393,384 + B158DRAFT_2237 0.81 -0.1 393,386 + B158DRAFT_2237 0.81 -0.2 393,394 - B158DRAFT_2237 0.82 -0.4 393,394 - B158DRAFT_2237 0.82 -0.0 393,454 + B158DRAFT_2237 0.83 -1.7 393,462 - B158DRAFT_2237 0.84 -0.3 393,481 + B158DRAFT_2237 0.84 -0.0 393,481 + B158DRAFT_2237 0.84 -0.3 393,481 + B158DRAFT_2237 0.84 -0.1 393,481 + B158DRAFT_2237 0.84 +0.4 393,481 + B158DRAFT_2237 0.84 +0.3 393,481 + B158DRAFT_2237 0.84 -2.5 393,481 + B158DRAFT_2237 0.84 -0.7 393,481 + B158DRAFT_2237 0.84 -0.3 393,481 + B158DRAFT_2237 0.84 +0.3 393,481 + B158DRAFT_2237 0.84 -0.5 393,481 + B158DRAFT_2237 0.84 -0.6 393,481 + B158DRAFT_2237 0.84 +0.7 393,481 + B158DRAFT_2237 0.84 -1.4 393,481 + B158DRAFT_2237 0.84 -1.2 393,489 - B158DRAFT_2237 0.84 +0.0 393,489 - B158DRAFT_2237 0.84 +0.1 393,489 - B158DRAFT_2237 0.84 -0.2 393,489 - B158DRAFT_2237 0.84 -0.4 393,489 - B158DRAFT_2237 0.84 +0.3 393,515 - B158DRAFT_2237 0.85 +0.0 393,540 + B158DRAFT_2237 0.86 -0.3 393,540 + B158DRAFT_2237 0.86 -0.8 393,548 - B158DRAFT_2237 0.86 +0.0 393,548 - B158DRAFT_2237 0.86 -0.1 393,548 - B158DRAFT_2237 0.86 -0.1 393,562 + B158DRAFT_2237 0.87 +1.4 393,570 - B158DRAFT_2237 0.87 -1.2 393,570 - B158DRAFT_2237 0.87 -0.2 393,570 - B158DRAFT_2237 0.87 -0.3 393,641 - B158DRAFT_2237 0.89 -1.0 393,734 + -0.1 393,784 + +0.6 393,784 + -0.0 393,792 - -0.2 393,877 - -0.5 393,877 - -0.4 393,897 - -0.4 393,897 - -0.5 393,903 - +0.1 393,903 - +0.7 393,907 + -0.1 393,915 - +0.1 393,915 - -0.2 393,917 + -0.7 393,918 + +0.4 393,923 + -0.4 393,923 + +1.4 393,931 - -0.5 393,965 + +0.9 393,967 - -0.8 393,979 + -0.1 393,979 + +0.3 393,986 + +0.1 393,986 + -0.2 393,987 - -0.8 393,987 - +0.2 393,987 - -0.1 393,987 - +0.8 393,994 - -0.7 393,996 + +0.1 393,996 + -0.3 393,996 + -1.5 393,996 + -1.2 393,996 + -0.2 393,996 + -1.0 393,996 + -0.1 393,996 + -0.8 394,004 - -0.6 394,004 - -1.8 394,004 - -1.4 394,004 - +0.5 394,004 - -0.3 394,032 - -0.3 394,040 - +0.3 394,045 - -0.7 394,045 - -0.3 394,064 + -0.4 394,099 - -0.3 394,131 + -0.0 394,141 + -0.6 394,154 + -0.0 394,154 + +0.0 394,162 - +0.3 394,162 - -0.1 394,224 - -1.7 394,250 - -0.9 394,340 + -0.3 394,348 - -0.0 394,355 + +0.1 394,355 + -1.6 394,390 - +0.3 394,525 + B158DRAFT_2238 0.20 +0.4 394,525 + B158DRAFT_2238 0.20 -0.1 394,533 - B158DRAFT_2238 0.20 +0.0 394,533 - B158DRAFT_2238 0.20 -0.1 394,582 - B158DRAFT_2238 0.24 -0.0 394,665 + B158DRAFT_2238 0.30 -0.6 394,688 + B158DRAFT_2238 0.32 -0.2 394,720 - B158DRAFT_2238 0.35 -1.1 394,768 + B158DRAFT_2238 0.38 -0.2 394,786 + B158DRAFT_2238 0.40 -1.6 394,794 + B158DRAFT_2238 0.40 -0.6 394,794 + B158DRAFT_2238 0.40 -0.3 394,807 - B158DRAFT_2238 0.41 -0.8 394,821 - B158DRAFT_2238 0.42 +0.6 394,952 + B158DRAFT_2238 0.52 -0.8 394,969 + B158DRAFT_2238 0.54 -0.2 395,028 + B158DRAFT_2238 0.58 -1.5 395,028 + B158DRAFT_2238 0.58 -1.3 395,035 + B158DRAFT_2238 0.59 -0.6 395,053 + B158DRAFT_2238 0.60 -0.8 395,061 - B158DRAFT_2238 0.61 -0.0 395,061 - B158DRAFT_2238 0.61 -1.5 395,074 - B158DRAFT_2238 0.62 -2.0 395,095 - B158DRAFT_2238 0.63 -1.1 395,142 + B158DRAFT_2238 0.67 -0.6 395,300 + B158DRAFT_2238 0.79 -0.4 395,308 - B158DRAFT_2238 0.80 +0.5 395,331 - B158DRAFT_2238 0.81 -1.0 395,451 + -0.4 395,451 + -0.1 395,478 + -0.2 395,492 + -1.8 395,492 + -0.4 395,584 - -0.8 395,584 - +0.3 395,591 - -0.2 395,591 - -0.7 395,620 + -0.2 395,669 - +0.3 395,693 - -0.3 395,761 + -0.5 395,761 + -0.4 395,781 + +0.8 395,785 + +0.0 395,808 - -0.1 395,828 - B158DRAFT_2239 0.11 -0.1 395,837 + B158DRAFT_2239 0.11 -0.3 395,837 + B158DRAFT_2239 0.11 -0.0 395,845 - B158DRAFT_2239 0.12 -0.1 395,889 + B158DRAFT_2239 0.14 -0.3 395,894 - B158DRAFT_2239 0.15 -1.0 395,943 - B158DRAFT_2239 0.18 +0.3 395,958 - B158DRAFT_2239 0.19 -0.6 396,006 + B158DRAFT_2239 0.22 -0.4 396,006 + B158DRAFT_2239 0.22 -0.3 396,006 + B158DRAFT_2239 0.22 +0.2 396,014 - B158DRAFT_2239 0.22 -0.1 396,014 - B158DRAFT_2239 0.22 -0.2 396,014 - B158DRAFT_2239 0.22 -0.0 396,014 - B158DRAFT_2239 0.22 +0.6 396,037 - B158DRAFT_2239 0.24 +0.3 396,065 + B158DRAFT_2239 0.26 +0.3 396,065 - B158DRAFT_2239 0.26 +0.3 396,168 + B158DRAFT_2239 0.32 -2.3 396,187 + B158DRAFT_2239 0.33 +0.5 396,195 + B158DRAFT_2239 0.34 -0.5 396,195 + B158DRAFT_2239 0.34 +0.3 396,195 + B158DRAFT_2239 0.34 -0.0 396,195 + B158DRAFT_2239 0.34 -0.3 396,195 + B158DRAFT_2239 0.34 -1.6 396,195 + B158DRAFT_2239 0.34 +0.3 396,195 + B158DRAFT_2239 0.34 +0.4 396,195 - B158DRAFT_2239 0.34 -0.3 396,203 - B158DRAFT_2239 0.34 -0.8 396,203 - B158DRAFT_2239 0.34 +0.1 396,211 - B158DRAFT_2239 0.35 +0.5 396,250 - B158DRAFT_2239 0.37 -1.3 396,269 - B158DRAFT_2239 0.38 -0.6 396,271 - B158DRAFT_2239 0.38 -0.2 396,278 + B158DRAFT_2239 0.39 -0.2 396,286 + B158DRAFT_2239 0.39 +0.0 396,294 - B158DRAFT_2239 0.40 -0.2 396,346 + B158DRAFT_2239 0.43 -0.7 396,357 + B158DRAFT_2239 0.44 -0.3 396,474 + B158DRAFT_2239 0.51 +1.1 396,482 - B158DRAFT_2239 0.52 -0.3 396,493 + B158DRAFT_2239 0.52 -0.0 396,501 - B158DRAFT_2239 0.53 +0.1 396,516 - B158DRAFT_2239 0.54 -0.1 396,517 + B158DRAFT_2239 0.54 +0.4 396,521 + B158DRAFT_2239 0.54 -0.4 396,524 - B158DRAFT_2239 0.54 +0.2 396,524 - B158DRAFT_2239 0.54 -0.4
Or see this region's nucleotide sequence