Experiment: m.b. nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2228 and B158DRAFT_2229 are separated by 70 nucleotides B158DRAFT_2229 and B158DRAFT_2230 are separated by 98 nucleotides B158DRAFT_2230 and B158DRAFT_2231 are separated by 133 nucleotides
B158DRAFT_2228: B158DRAFT_2228 - dihydroorotate oxidase A (EC 1.3.3.1), at 380,372 to 381,400
_2228
B158DRAFT_2229: B158DRAFT_2229 - 23S rRNA m(2)G-2445 methyltransferase (EC 2.1.1.52), at 381,471 to 383,627
_2229
B158DRAFT_2230: B158DRAFT_2230 - hypothetical protein, at 383,726 to 384,424
_2230
B158DRAFT_2231: B158DRAFT_2231 - Glutaredoxin-like domain (DUF836)., at 384,558 to 384,824
_2231
Position (kb) 381
382
383
384 Strain fitness (log2 ratio) -2
-1
0
1
2 at 381.499 kb on - strand at 381.522 kb on + strand at 381.530 kb on - strand at 381.613 kb on - strand at 381.686 kb on - strand at 381.708 kb on - strand, within B158DRAFT_2229 at 381.790 kb on + strand, within B158DRAFT_2229 at 381.911 kb on + strand, within B158DRAFT_2229 at 381.919 kb on - strand, within B158DRAFT_2229 at 381.921 kb on + strand, within B158DRAFT_2229 at 381.930 kb on - strand, within B158DRAFT_2229 at 381.943 kb on + strand, within B158DRAFT_2229 at 381.943 kb on + strand, within B158DRAFT_2229 at 381.951 kb on - strand, within B158DRAFT_2229 at 381.951 kb on - strand, within B158DRAFT_2229 at 381.958 kb on + strand, within B158DRAFT_2229 at 381.970 kb on + strand, within B158DRAFT_2229 at 381.970 kb on + strand, within B158DRAFT_2229 at 382.011 kb on + strand, within B158DRAFT_2229 at 382.016 kb on + strand, within B158DRAFT_2229 at 382.016 kb on - strand, within B158DRAFT_2229 at 382.047 kb on + strand, within B158DRAFT_2229 at 382.049 kb on + strand, within B158DRAFT_2229 at 382.057 kb on - strand, within B158DRAFT_2229 at 382.131 kb on + strand, within B158DRAFT_2229 at 382.131 kb on + strand, within B158DRAFT_2229 at 382.282 kb on + strand, within B158DRAFT_2229 at 382.374 kb on - strand, within B158DRAFT_2229 at 382.384 kb on + strand, within B158DRAFT_2229 at 382.489 kb on + strand, within B158DRAFT_2229 at 382.545 kb on + strand, within B158DRAFT_2229 at 382.555 kb on + strand, within B158DRAFT_2229 at 382.555 kb on + strand, within B158DRAFT_2229 at 382.563 kb on - strand, within B158DRAFT_2229 at 382.693 kb on + strand, within B158DRAFT_2229 at 382.791 kb on - strand, within B158DRAFT_2229 at 382.791 kb on - strand, within B158DRAFT_2229 at 382.965 kb on - strand, within B158DRAFT_2229 at 382.965 kb on - strand, within B158DRAFT_2229 at 382.970 kb on + strand, within B158DRAFT_2229 at 382.990 kb on + strand, within B158DRAFT_2229 at 383.008 kb on - strand, within B158DRAFT_2229 at 383.038 kb on + strand, within B158DRAFT_2229 at 383.074 kb on + strand, within B158DRAFT_2229 at 383.082 kb on - strand, within B158DRAFT_2229 at 383.087 kb on - strand, within B158DRAFT_2229 at 383.134 kb on - strand, within B158DRAFT_2229 at 383.159 kb on - strand, within B158DRAFT_2229 at 383.242 kb on + strand, within B158DRAFT_2229 at 383.317 kb on + strand, within B158DRAFT_2229 at 383.317 kb on + strand, within B158DRAFT_2229 at 383.317 kb on + strand, within B158DRAFT_2229 at 383.325 kb on - strand, within B158DRAFT_2229 at 383.325 kb on - strand, within B158DRAFT_2229 at 383.325 kb on - strand, within B158DRAFT_2229 at 383.334 kb on + strand, within B158DRAFT_2229 at 383.341 kb on + strand, within B158DRAFT_2229 at 383.342 kb on - strand, within B158DRAFT_2229 at 383.342 kb on - strand, within B158DRAFT_2229 at 383.344 kb on + strand, within B158DRAFT_2229 at 383.375 kb on - strand, within B158DRAFT_2229 at 383.397 kb on + strand, within B158DRAFT_2229 at 383.412 kb on - strand at 383.412 kb on - strand at 383.421 kb on + strand at 383.454 kb on + strand at 383.605 kb on + strand at 383.613 kb on - strand at 383.652 kb on + strand at 383.907 kb on + strand, within B158DRAFT_2230 at 384.178 kb on - strand, within B158DRAFT_2230 at 384.201 kb on + strand, within B158DRAFT_2230 at 384.201 kb on + strand, within B158DRAFT_2230 at 384.209 kb on - strand, within B158DRAFT_2230 at 384.209 kb on - strand, within B158DRAFT_2230 at 384.209 kb on - strand, within B158DRAFT_2230
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM remove 381,499 - -1.0 381,522 + -1.8 381,530 - +0.2 381,613 - -0.4 381,686 - -0.3 381,708 - B158DRAFT_2229 0.11 -0.5 381,790 + B158DRAFT_2229 0.15 +0.2 381,911 + B158DRAFT_2229 0.20 +0.5 381,919 - B158DRAFT_2229 0.21 -0.1 381,921 + B158DRAFT_2229 0.21 -0.9 381,930 - B158DRAFT_2229 0.21 +0.3 381,943 + B158DRAFT_2229 0.22 -1.0 381,943 + B158DRAFT_2229 0.22 -0.4 381,951 - B158DRAFT_2229 0.22 -0.7 381,951 - B158DRAFT_2229 0.22 +0.6 381,958 + B158DRAFT_2229 0.23 -0.9 381,970 + B158DRAFT_2229 0.23 -0.6 381,970 + B158DRAFT_2229 0.23 -0.1 382,011 + B158DRAFT_2229 0.25 +0.2 382,016 + B158DRAFT_2229 0.25 -0.8 382,016 - B158DRAFT_2229 0.25 -0.1 382,047 + B158DRAFT_2229 0.27 -0.8 382,049 + B158DRAFT_2229 0.27 -0.5 382,057 - B158DRAFT_2229 0.27 -0.5 382,131 + B158DRAFT_2229 0.31 -0.2 382,131 + B158DRAFT_2229 0.31 -0.8 382,282 + B158DRAFT_2229 0.38 -0.2 382,374 - B158DRAFT_2229 0.42 +0.3 382,384 + B158DRAFT_2229 0.42 +0.7 382,489 + B158DRAFT_2229 0.47 +1.2 382,545 + B158DRAFT_2229 0.50 -0.3 382,555 + B158DRAFT_2229 0.50 +0.2 382,555 + B158DRAFT_2229 0.50 -0.3 382,563 - B158DRAFT_2229 0.51 +0.2 382,693 + B158DRAFT_2229 0.57 -0.6 382,791 - B158DRAFT_2229 0.61 -0.8 382,791 - B158DRAFT_2229 0.61 -0.2 382,965 - B158DRAFT_2229 0.69 -1.5 382,965 - B158DRAFT_2229 0.69 -0.3 382,970 + B158DRAFT_2229 0.69 +0.9 382,990 + B158DRAFT_2229 0.70 +0.1 383,008 - B158DRAFT_2229 0.71 +0.6 383,038 + B158DRAFT_2229 0.73 -0.5 383,074 + B158DRAFT_2229 0.74 +0.2 383,082 - B158DRAFT_2229 0.75 -0.1 383,087 - B158DRAFT_2229 0.75 +0.3 383,134 - B158DRAFT_2229 0.77 +0.3 383,159 - B158DRAFT_2229 0.78 -0.2 383,242 + B158DRAFT_2229 0.82 -0.2 383,317 + B158DRAFT_2229 0.86 -0.1 383,317 + B158DRAFT_2229 0.86 +0.0 383,317 + B158DRAFT_2229 0.86 -0.0 383,325 - B158DRAFT_2229 0.86 -0.2 383,325 - B158DRAFT_2229 0.86 -2.2 383,325 - B158DRAFT_2229 0.86 -0.2 383,334 + B158DRAFT_2229 0.86 -0.6 383,341 + B158DRAFT_2229 0.87 +0.2 383,342 - B158DRAFT_2229 0.87 -0.2 383,342 - B158DRAFT_2229 0.87 -0.8 383,344 + B158DRAFT_2229 0.87 +2.2 383,375 - B158DRAFT_2229 0.88 +0.1 383,397 + B158DRAFT_2229 0.89 +0.3 383,412 - +0.6 383,412 - +0.4 383,421 + -0.5 383,454 + -0.7 383,605 + -0.4 383,613 - -0.5 383,652 + +0.7 383,907 + B158DRAFT_2230 0.26 +0.6 384,178 - B158DRAFT_2230 0.65 +0.8 384,201 + B158DRAFT_2230 0.68 +0.3 384,201 + B158DRAFT_2230 0.68 +0.5 384,209 - B158DRAFT_2230 0.69 +0.2 384,209 - B158DRAFT_2230 0.69 +0.5 384,209 - B158DRAFT_2230 0.69 +1.3
Or see this region's nucleotide sequence