Experiment: m.b. nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1919 and B158DRAFT_1920 are separated by 12 nucleotides B158DRAFT_1920 and B158DRAFT_1921 are separated by 251 nucleotides B158DRAFT_1921 and B158DRAFT_1922 are separated by 300 nucleotides
B158DRAFT_1919: B158DRAFT_1919 - farnesyl-diphosphate synthase (EC 2.5.1.10), at 54,314 to 55,204
_1919
B158DRAFT_1920: B158DRAFT_1920 - Exodeoxyribonuclease VII small subunit (EC 3.1.11.6), at 55,217 to 55,462
_1920
B158DRAFT_1921: B158DRAFT_1921 - glutaminyl-tRNA synthetase (EC 6.1.1.18), at 55,714 to 57,426
_1921
B158DRAFT_1922: B158DRAFT_1922 - Uncharacterized protein involved in outer membrane biogenesis, at 57,727 to 59,574
_1922
Position (kb) 55
56
57
58 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.264 kb on - strand, within B158DRAFT_1920 at 55.323 kb on - strand, within B158DRAFT_1920 at 55.344 kb on - strand, within B158DRAFT_1920 at 55.376 kb on - strand, within B158DRAFT_1920 at 55.511 kb on - strand at 55.511 kb on - strand at 55.618 kb on - strand at 57.396 kb on + strand at 57.396 kb on + strand at 57.396 kb on + strand at 57.444 kb on - strand at 57.457 kb on + strand at 57.505 kb on - strand at 57.505 kb on - strand at 57.506 kb on - strand at 57.506 kb on - strand at 57.507 kb on + strand at 57.515 kb on - strand at 57.515 kb on - strand at 57.515 kb on - strand at 57.515 kb on - strand at 57.515 kb on - strand at 57.517 kb on + strand at 57.517 kb on + strand at 57.521 kb on + strand at 57.525 kb on - strand at 57.525 kb on - strand at 57.525 kb on - strand at 57.530 kb on - strand at 57.531 kb on + strand at 57.539 kb on - strand at 57.539 kb on - strand at 57.553 kb on - strand at 57.608 kb on - strand at 57.646 kb on - strand at 57.683 kb on + strand at 57.757 kb on - strand at 57.757 kb on - strand at 57.757 kb on - strand at 57.828 kb on + strand at 57.828 kb on + strand at 57.836 kb on - strand at 57.841 kb on - strand at 57.892 kb on + strand at 57.893 kb on + strand at 57.900 kb on - strand at 57.900 kb on - strand at 57.955 kb on + strand, within B158DRAFT_1922 at 57.970 kb on - strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 58.018 kb on - strand, within B158DRAFT_1922 at 58.084 kb on - strand, within B158DRAFT_1922 at 58.162 kb on + strand, within B158DRAFT_1922 at 58.162 kb on + strand, within B158DRAFT_1922 at 58.162 kb on + strand, within B158DRAFT_1922 at 58.162 kb on + strand, within B158DRAFT_1922 at 58.162 kb on + strand, within B158DRAFT_1922 at 58.162 kb on + strand, within B158DRAFT_1922 at 58.167 kb on + strand, within B158DRAFT_1922 at 58.167 kb on + strand, within B158DRAFT_1922 at 58.170 kb on - strand, within B158DRAFT_1922 at 58.170 kb on - strand, within B158DRAFT_1922 at 58.170 kb on - strand, within B158DRAFT_1922 at 58.170 kb on - strand, within B158DRAFT_1922 at 58.170 kb on - strand, within B158DRAFT_1922 at 58.170 kb on - strand, within B158DRAFT_1922 at 58.175 kb on - strand, within B158DRAFT_1922 at 58.227 kb on + strand, within B158DRAFT_1922 at 58.235 kb on - strand, within B158DRAFT_1922 at 58.289 kb on - strand, within B158DRAFT_1922 at 58.317 kb on + strand, within B158DRAFT_1922 at 58.320 kb on - strand, within B158DRAFT_1922 at 58.335 kb on - strand, within B158DRAFT_1922 at 58.335 kb on - strand, within B158DRAFT_1922 at 58.354 kb on - strand, within B158DRAFT_1922 at 58.359 kb on - strand, within B158DRAFT_1922
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM remove 55,216 - -0.5 55,216 - -0.1 55,216 - +0.3 55,216 - +0.4 55,216 - -0.1 55,216 - +0.2 55,216 - -0.1 55,216 - -2.0 55,216 - -0.1 55,216 - -0.6 55,216 - +1.0 55,264 - B158DRAFT_1920 0.19 +1.6 55,323 - B158DRAFT_1920 0.43 +2.7 55,344 - B158DRAFT_1920 0.52 +2.9 55,376 - B158DRAFT_1920 0.65 +2.8 55,511 - +3.2 55,511 - +3.1 55,618 - -0.5 57,396 + -0.1 57,396 + +0.1 57,396 + +0.5 57,444 - -0.1 57,457 + -0.1 57,505 - -0.3 57,505 - +0.0 57,506 - -1.4 57,506 - -0.1 57,507 + -0.4 57,515 - -0.4 57,515 - -0.5 57,515 - -1.3 57,515 - -0.3 57,515 - -0.4 57,517 + -0.4 57,517 + -0.4 57,521 + -0.3 57,525 - -0.2 57,525 - -0.5 57,525 - +0.0 57,530 - -0.4 57,531 + -0.8 57,539 - -0.7 57,539 - +0.5 57,553 - +0.1 57,608 - -0.2 57,646 - +0.5 57,683 + -0.2 57,757 - -1.7 57,757 - -0.3 57,757 - -0.6 57,828 + -1.0 57,828 + +1.0 57,836 - -0.3 57,841 - +0.4 57,892 + -0.3 57,893 + +0.0 57,900 - -0.2 57,900 - -0.5 57,955 + B158DRAFT_1922 0.12 +0.4 57,970 - B158DRAFT_1922 0.13 -0.4 57,972 + B158DRAFT_1922 0.13 -1.8 57,972 + B158DRAFT_1922 0.13 -0.6 57,972 + B158DRAFT_1922 0.13 -0.7 57,972 + B158DRAFT_1922 0.13 -1.1 57,972 + B158DRAFT_1922 0.13 -1.6 57,972 + B158DRAFT_1922 0.13 -0.8 57,972 + B158DRAFT_1922 0.13 -0.7 57,972 + B158DRAFT_1922 0.13 -1.0 57,972 + B158DRAFT_1922 0.13 -0.5 57,972 + B158DRAFT_1922 0.13 -0.6 57,972 + B158DRAFT_1922 0.13 -0.8 57,980 - B158DRAFT_1922 0.14 +0.0 57,980 - B158DRAFT_1922 0.14 -0.4 57,980 - B158DRAFT_1922 0.14 -1.0 57,980 - B158DRAFT_1922 0.14 -0.2 57,980 - B158DRAFT_1922 0.14 -0.3 57,980 - B158DRAFT_1922 0.14 -0.6 57,980 - B158DRAFT_1922 0.14 -0.0 57,980 - B158DRAFT_1922 0.14 +0.6 57,980 - B158DRAFT_1922 0.14 -0.9 58,018 - B158DRAFT_1922 0.16 -0.5 58,084 - B158DRAFT_1922 0.19 -0.3 58,162 + B158DRAFT_1922 0.24 -0.0 58,162 + B158DRAFT_1922 0.24 -0.1 58,162 + B158DRAFT_1922 0.24 -0.6 58,162 + B158DRAFT_1922 0.24 -0.1 58,162 + B158DRAFT_1922 0.24 -0.4 58,162 + B158DRAFT_1922 0.24 -0.7 58,167 + B158DRAFT_1922 0.24 -0.7 58,167 + B158DRAFT_1922 0.24 +0.2 58,170 - B158DRAFT_1922 0.24 -0.8 58,170 - B158DRAFT_1922 0.24 -1.4 58,170 - B158DRAFT_1922 0.24 -0.5 58,170 - B158DRAFT_1922 0.24 +0.0 58,170 - B158DRAFT_1922 0.24 -0.9 58,170 - B158DRAFT_1922 0.24 -0.9 58,175 - B158DRAFT_1922 0.24 +0.8 58,227 + B158DRAFT_1922 0.27 -0.1 58,235 - B158DRAFT_1922 0.27 +0.4 58,289 - B158DRAFT_1922 0.30 -0.7 58,317 + B158DRAFT_1922 0.32 -0.3 58,320 - B158DRAFT_1922 0.32 -0.5 58,335 - B158DRAFT_1922 0.33 -1.2 58,335 - B158DRAFT_1922 0.33 -1.4 58,354 - B158DRAFT_1922 0.34 -1.3 58,359 - B158DRAFT_1922 0.34 +2.5
Or see this region's nucleotide sequence