Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1825

Experiment: m.b. nitrate 200 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1824 and B158DRAFT_1825 are separated by 164 nucleotidesB158DRAFT_1825 and B158DRAFT_1826 are separated by 99 nucleotidesB158DRAFT_1826 and B158DRAFT_1827 are separated by 330 nucleotides B158DRAFT_1824: B158DRAFT_1824 - Membrane proteins related to metalloendopeptidases, at 1,923,968 to 1,925,467 _1824 B158DRAFT_1825: B158DRAFT_1825 - hypothetical protein, at 1,925,632 to 1,925,985 _1825 B158DRAFT_1826: B158DRAFT_1826 - Cold shock proteins, at 1,926,085 to 1,926,291 _1826 B158DRAFT_1827: B158DRAFT_1827 - Domain of unknown function (DU1801)., at 1,926,622 to 1,927,050 _1827 Position (kb) 1925 1926Strain fitness (log2 ratio) -2 -1 0 1 2at 1924.702 kb on - strand, within B158DRAFT_1824at 1924.702 kb on - strand, within B158DRAFT_1824at 1924.702 kb on - strand, within B158DRAFT_1824at 1924.751 kb on + strand, within B158DRAFT_1824at 1924.764 kb on + strand, within B158DRAFT_1824at 1924.888 kb on + strand, within B158DRAFT_1824at 1924.888 kb on - strand, within B158DRAFT_1824at 1924.950 kb on + strand, within B158DRAFT_1824at 1924.954 kb on - strand, within B158DRAFT_1824at 1924.958 kb on - strand, within B158DRAFT_1824at 1924.960 kb on + strand, within B158DRAFT_1824at 1924.960 kb on + strand, within B158DRAFT_1824at 1924.960 kb on + strand, within B158DRAFT_1824at 1924.960 kb on + strand, within B158DRAFT_1824at 1924.960 kb on + strand, within B158DRAFT_1824at 1924.960 kb on + strand, within B158DRAFT_1824at 1925.014 kb on - strand, within B158DRAFT_1824at 1925.034 kb on + strand, within B158DRAFT_1824at 1925.034 kb on + strand, within B158DRAFT_1824at 1925.042 kb on - strand, within B158DRAFT_1824at 1925.068 kb on + strand, within B158DRAFT_1824at 1925.068 kb on + strand, within B158DRAFT_1824at 1925.068 kb on + strand, within B158DRAFT_1824at 1925.068 kb on + strand, within B158DRAFT_1824at 1925.068 kb on + strand, within B158DRAFT_1824at 1925.076 kb on - strand, within B158DRAFT_1824at 1925.143 kb on + strand, within B158DRAFT_1824at 1925.182 kb on + strand, within B158DRAFT_1824at 1925.203 kb on + strand, within B158DRAFT_1824at 1925.203 kb on + strand, within B158DRAFT_1824at 1925.203 kb on + strand, within B158DRAFT_1824at 1925.211 kb on - strand, within B158DRAFT_1824at 1925.211 kb on - strand, within B158DRAFT_1824at 1925.321 kb on + strandat 1925.368 kb on + strandat 1925.368 kb on + strandat 1925.368 kb on + strandat 1925.368 kb on + strandat 1925.376 kb on - strandat 1925.378 kb on + strandat 1925.386 kb on + strandat 1925.386 kb on + strandat 1925.391 kb on + strandat 1925.391 kb on + strandat 1925.391 kb on + strandat 1925.394 kb on - strandat 1925.399 kb on - strandat 1925.427 kb on + strandat 1925.435 kb on - strandat 1925.436 kb on - strandat 1925.455 kb on + strandat 1925.463 kb on - strandat 1925.572 kb on - strandat 1925.681 kb on + strand, within B158DRAFT_1825at 1925.681 kb on + strand, within B158DRAFT_1825at 1925.681 kb on + strand, within B158DRAFT_1825at 1925.703 kb on - strand, within B158DRAFT_1825at 1925.734 kb on - strand, within B158DRAFT_1825at 1925.776 kb on - strand, within B158DRAFT_1825at 1925.776 kb on - strand, within B158DRAFT_1825at 1925.839 kb on + strand, within B158DRAFT_1825at 1925.842 kb on - strand, within B158DRAFT_1825at 1925.849 kb on - strand, within B158DRAFT_1825at 1925.877 kb on - strand, within B158DRAFT_1825at 1925.894 kb on + strand, within B158DRAFT_1825at 1925.894 kb on + strand, within B158DRAFT_1825at 1925.902 kb on - strand, within B158DRAFT_1825at 1925.923 kb on + strand, within B158DRAFT_1825at 1925.923 kb on + strand, within B158DRAFT_1825at 1926.148 kb on + strand, within B158DRAFT_1826at 1926.181 kb on + strand, within B158DRAFT_1826at 1926.204 kb on - strand, within B158DRAFT_1826at 1926.307 kb on - strandat 1926.354 kb on - strandat 1926.418 kb on + strandat 1926.548 kb on + strandat 1926.601 kb on - strandat 1926.603 kb on + strandat 1926.603 kb on + strandat 1926.611 kb on - strandat 1926.611 kb on - strandat 1926.613 kb on + strandat 1926.621 kb on - strandat 1926.621 kb on - strandat 1926.621 kb on - strandat 1926.656 kb on + strandat 1926.664 kb on - strandat 1926.670 kb on - strand, within B158DRAFT_1827at 1926.684 kb on + strand, within B158DRAFT_1827at 1926.740 kb on + strand, within B158DRAFT_1827at 1926.743 kb on - strand, within B158DRAFT_1827at 1926.748 kb on - strand, within B158DRAFT_1827at 1926.748 kb on - strand, within B158DRAFT_1827at 1926.785 kb on + strand, within B158DRAFT_1827at 1926.834 kb on - strand, within B158DRAFT_1827at 1926.845 kb on + strand, within B158DRAFT_1827at 1926.853 kb on - strand, within B158DRAFT_1827at 1926.853 kb on - strand, within B158DRAFT_1827at 1926.853 kb on - strand, within B158DRAFT_1827at 1926.853 kb on - strand, within B158DRAFT_1827at 1926.948 kb on - strand, within B158DRAFT_1827at 1926.953 kb on - strand, within B158DRAFT_1827

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM
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1,924,702 - B158DRAFT_1824 0.49 -0.0
1,924,702 - B158DRAFT_1824 0.49 -1.1
1,924,702 - B158DRAFT_1824 0.49 -0.3
1,924,751 + B158DRAFT_1824 0.52 -0.1
1,924,764 + B158DRAFT_1824 0.53 -0.9
1,924,888 + B158DRAFT_1824 0.61 -0.3
1,924,888 - B158DRAFT_1824 0.61 -0.2
1,924,950 + B158DRAFT_1824 0.65 +0.1
1,924,954 - B158DRAFT_1824 0.66 +0.4
1,924,958 - B158DRAFT_1824 0.66 -1.2
1,924,960 + B158DRAFT_1824 0.66 -0.2
1,924,960 + B158DRAFT_1824 0.66 +0.2
1,924,960 + B158DRAFT_1824 0.66 +2.6
1,924,960 + B158DRAFT_1824 0.66 +0.0
1,924,960 + B158DRAFT_1824 0.66 -0.4
1,924,960 + B158DRAFT_1824 0.66 -0.9
1,925,014 - B158DRAFT_1824 0.70 -0.7
1,925,034 + B158DRAFT_1824 0.71 -0.7
1,925,034 + B158DRAFT_1824 0.71 +0.4
1,925,042 - B158DRAFT_1824 0.72 -0.3
1,925,068 + B158DRAFT_1824 0.73 -0.1
1,925,068 + B158DRAFT_1824 0.73 -0.5
1,925,068 + B158DRAFT_1824 0.73 -0.5
1,925,068 + B158DRAFT_1824 0.73 -1.4
1,925,068 + B158DRAFT_1824 0.73 +0.3
1,925,076 - B158DRAFT_1824 0.74 -0.0
1,925,143 + B158DRAFT_1824 0.78 +0.2
1,925,182 + B158DRAFT_1824 0.81 -0.0
1,925,203 + B158DRAFT_1824 0.82 -0.4
1,925,203 + B158DRAFT_1824 0.82 +0.1
1,925,203 + B158DRAFT_1824 0.82 +0.1
1,925,211 - B158DRAFT_1824 0.83 -0.0
1,925,211 - B158DRAFT_1824 0.83 -0.7
1,925,321 + -0.4
1,925,368 + +0.0
1,925,368 + -0.4
1,925,368 + -1.0
1,925,368 + -0.3
1,925,376 - -0.8
1,925,378 + -0.2
1,925,386 + +0.1
1,925,386 + +0.4
1,925,391 + -0.1
1,925,391 + +0.1
1,925,391 + +0.2
1,925,394 - -0.1
1,925,399 - -0.2
1,925,427 + +0.5
1,925,435 - +0.5
1,925,436 - -1.1
1,925,455 + -1.0
1,925,463 - +0.2
1,925,572 - -2.3
1,925,681 + B158DRAFT_1825 0.14 -0.5
1,925,681 + B158DRAFT_1825 0.14 -1.0
1,925,681 + B158DRAFT_1825 0.14 +0.0
1,925,703 - B158DRAFT_1825 0.20 -0.2
1,925,734 - B158DRAFT_1825 0.29 -0.4
1,925,776 - B158DRAFT_1825 0.41 -0.4
1,925,776 - B158DRAFT_1825 0.41 -1.0
1,925,839 + B158DRAFT_1825 0.58 -0.2
1,925,842 - B158DRAFT_1825 0.59 +0.0
1,925,849 - B158DRAFT_1825 0.61 -0.5
1,925,877 - B158DRAFT_1825 0.69 -1.2
1,925,894 + B158DRAFT_1825 0.74 -1.1
1,925,894 + B158DRAFT_1825 0.74 +0.0
1,925,902 - B158DRAFT_1825 0.76 -0.6
1,925,923 + B158DRAFT_1825 0.82 +0.0
1,925,923 + B158DRAFT_1825 0.82 -1.0
1,926,148 + B158DRAFT_1826 0.30 +0.1
1,926,181 + B158DRAFT_1826 0.46 +0.6
1,926,204 - B158DRAFT_1826 0.57 +0.4
1,926,307 - -0.4
1,926,354 - -0.4
1,926,418 + -0.0
1,926,548 + -0.7
1,926,601 - -0.4
1,926,603 + -0.0
1,926,603 + +0.3
1,926,611 - -0.2
1,926,611 - -0.6
1,926,613 + -0.2
1,926,621 - +0.7
1,926,621 - -0.2
1,926,621 - +0.4
1,926,656 + +0.7
1,926,664 - -0.4
1,926,670 - B158DRAFT_1827 0.11 -0.1
1,926,684 + B158DRAFT_1827 0.14 -0.4
1,926,740 + B158DRAFT_1827 0.28 +0.5
1,926,743 - B158DRAFT_1827 0.28 +1.2
1,926,748 - B158DRAFT_1827 0.29 +0.0
1,926,748 - B158DRAFT_1827 0.29 -0.6
1,926,785 + B158DRAFT_1827 0.38 -1.3
1,926,834 - B158DRAFT_1827 0.49 +0.3
1,926,845 + B158DRAFT_1827 0.52 -1.3
1,926,853 - B158DRAFT_1827 0.54 +2.4
1,926,853 - B158DRAFT_1827 0.54 -0.6
1,926,853 - B158DRAFT_1827 0.54 -0.7
1,926,853 - B158DRAFT_1827 0.54 -0.6
1,926,948 - B158DRAFT_1827 0.76 -0.2
1,926,953 - B158DRAFT_1827 0.77 +1.0

Or see this region's nucleotide sequence