Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1608

Experiment: m.b. nitrate 200 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1607 and B158DRAFT_1608 are separated by 13 nucleotidesB158DRAFT_1608 and B158DRAFT_1609 overlap by 4 nucleotides B158DRAFT_1607: B158DRAFT_1607 - Na+/phosphate symporter, at 1,667,886 to 1,669,481 _1607 B158DRAFT_1608: B158DRAFT_1608 - ribose-phosphate pyrophosphokinase, at 1,669,495 to 1,670,379 _1608 B158DRAFT_1609: B158DRAFT_1609 - putative thymidine phosphorylase, at 1,670,376 to 1,671,890 _1609 Position (kb) 1669 1670 1671Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1668.522 kb on + strand, within B158DRAFT_1607at 1668.530 kb on - strand, within B158DRAFT_1607at 1668.533 kb on + strand, within B158DRAFT_1607at 1668.533 kb on + strand, within B158DRAFT_1607at 1668.533 kb on + strand, within B158DRAFT_1607at 1668.533 kb on + strand, within B158DRAFT_1607at 1668.533 kb on + strand, within B158DRAFT_1607at 1668.533 kb on + strand, within B158DRAFT_1607at 1668.535 kb on - strand, within B158DRAFT_1607at 1668.535 kb on - strand, within B158DRAFT_1607at 1668.541 kb on - strand, within B158DRAFT_1607at 1668.541 kb on - strand, within B158DRAFT_1607at 1668.541 kb on - strand, within B158DRAFT_1607at 1668.541 kb on - strand, within B158DRAFT_1607at 1668.541 kb on - strand, within B158DRAFT_1607at 1668.604 kb on + strand, within B158DRAFT_1607at 1668.724 kb on - strand, within B158DRAFT_1607at 1668.731 kb on + strand, within B158DRAFT_1607at 1668.848 kb on + strand, within B158DRAFT_1607at 1668.856 kb on - strand, within B158DRAFT_1607at 1668.858 kb on + strand, within B158DRAFT_1607at 1668.858 kb on + strand, within B158DRAFT_1607at 1668.858 kb on + strand, within B158DRAFT_1607at 1668.858 kb on + strand, within B158DRAFT_1607at 1668.858 kb on + strand, within B158DRAFT_1607at 1668.858 kb on + strand, within B158DRAFT_1607at 1668.858 kb on + strand, within B158DRAFT_1607at 1668.858 kb on + strand, within B158DRAFT_1607at 1668.858 kb on + strand, within B158DRAFT_1607at 1668.858 kb on + strand, within B158DRAFT_1607at 1668.858 kb on + strand, within B158DRAFT_1607at 1668.858 kb on + strand, within B158DRAFT_1607at 1668.858 kb on + strand, within B158DRAFT_1607at 1668.858 kb on + strand, within B158DRAFT_1607at 1668.858 kb on + strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.866 kb on - strand, within B158DRAFT_1607at 1668.877 kb on - strand, within B158DRAFT_1607at 1668.951 kb on + strand, within B158DRAFT_1607at 1668.951 kb on + strand, within B158DRAFT_1607at 1668.951 kb on + strand, within B158DRAFT_1607at 1669.046 kb on + strand, within B158DRAFT_1607at 1669.054 kb on + strand, within B158DRAFT_1607at 1669.054 kb on - strand, within B158DRAFT_1607at 1669.059 kb on - strand, within B158DRAFT_1607at 1669.118 kb on - strand, within B158DRAFT_1607at 1669.179 kb on - strand, within B158DRAFT_1607at 1669.184 kb on + strand, within B158DRAFT_1607at 1669.208 kb on + strand, within B158DRAFT_1607at 1669.216 kb on - strand, within B158DRAFT_1607at 1669.221 kb on - strand, within B158DRAFT_1607at 1669.238 kb on + strand, within B158DRAFT_1607at 1669.238 kb on + strand, within B158DRAFT_1607at 1669.253 kb on + strand, within B158DRAFT_1607at 1669.253 kb on + strand, within B158DRAFT_1607at 1669.260 kb on + strand, within B158DRAFT_1607at 1669.261 kb on - strand, within B158DRAFT_1607at 1669.261 kb on - strand, within B158DRAFT_1607at 1669.261 kb on - strand, within B158DRAFT_1607at 1669.261 kb on - strand, within B158DRAFT_1607at 1669.261 kb on - strand, within B158DRAFT_1607at 1669.299 kb on + strand, within B158DRAFT_1607at 1669.307 kb on - strand, within B158DRAFT_1607at 1669.339 kb on + strandat 1669.360 kb on + strandat 1669.396 kb on + strandat 1669.442 kb on + strandat 1669.443 kb on + strandat 1669.443 kb on + strandat 1669.451 kb on - strandat 1669.451 kb on - strandat 1669.477 kb on - strandat 1669.479 kb on + strandat 1669.488 kb on + strandat 1669.496 kb on - strandat 1669.499 kb on - strandat 1669.552 kb on - strandat 1669.552 kb on - strandat 1669.651 kb on + strand, within B158DRAFT_1608at 1669.657 kb on - strand, within B158DRAFT_1608at 1669.668 kb on - strand, within B158DRAFT_1608at 1669.785 kb on + strand, within B158DRAFT_1608at 1669.911 kb on + strand, within B158DRAFT_1608at 1669.911 kb on - strand, within B158DRAFT_1608at 1669.919 kb on - strand, within B158DRAFT_1608at 1669.926 kb on + strand, within B158DRAFT_1608at 1669.934 kb on - strand, within B158DRAFT_1608at 1669.964 kb on + strand, within B158DRAFT_1608at 1669.972 kb on - strand, within B158DRAFT_1608at 1669.972 kb on - strand, within B158DRAFT_1608at 1669.972 kb on - strand, within B158DRAFT_1608at 1669.972 kb on - strand, within B158DRAFT_1608at 1669.972 kb on - strand, within B158DRAFT_1608at 1669.972 kb on - strand, within B158DRAFT_1608at 1669.972 kb on - strand, within B158DRAFT_1608at 1669.977 kb on - strand, within B158DRAFT_1608at 1669.999 kb on - strand, within B158DRAFT_1608at 1670.038 kb on + strand, within B158DRAFT_1608at 1670.114 kb on - strand, within B158DRAFT_1608at 1670.117 kb on + strand, within B158DRAFT_1608at 1670.125 kb on - strand, within B158DRAFT_1608at 1670.203 kb on + strand, within B158DRAFT_1608at 1670.203 kb on + strand, within B158DRAFT_1608at 1670.211 kb on - strand, within B158DRAFT_1608at 1670.340 kb on + strandat 1670.348 kb on - strandat 1670.348 kb on - strandat 1670.436 kb on + strandat 1670.438 kb on + strandat 1670.438 kb on - strandat 1670.450 kb on - strandat 1670.471 kb on + strandat 1670.471 kb on + strandat 1670.472 kb on - strandat 1670.474 kb on + strandat 1670.482 kb on - strandat 1670.482 kb on - strandat 1670.484 kb on - strandat 1670.484 kb on - strandat 1670.492 kb on + strandat 1670.503 kb on + strandat 1670.504 kb on + strandat 1670.514 kb on + strandat 1670.637 kb on + strand, within B158DRAFT_1609at 1670.637 kb on + strand, within B158DRAFT_1609at 1670.637 kb on + strand, within B158DRAFT_1609at 1670.651 kb on + strand, within B158DRAFT_1609at 1670.655 kb on - strand, within B158DRAFT_1609at 1670.661 kb on + strand, within B158DRAFT_1609at 1670.661 kb on + strand, within B158DRAFT_1609at 1670.661 kb on + strand, within B158DRAFT_1609at 1670.669 kb on - strand, within B158DRAFT_1609at 1670.681 kb on + strand, within B158DRAFT_1609at 1670.711 kb on + strand, within B158DRAFT_1609at 1670.719 kb on - strand, within B158DRAFT_1609at 1670.745 kb on + strand, within B158DRAFT_1609at 1670.784 kb on + strand, within B158DRAFT_1609at 1670.784 kb on + strand, within B158DRAFT_1609at 1670.792 kb on - strand, within B158DRAFT_1609at 1670.801 kb on + strand, within B158DRAFT_1609at 1670.801 kb on + strand, within B158DRAFT_1609at 1670.849 kb on + strand, within B158DRAFT_1609at 1670.883 kb on + strand, within B158DRAFT_1609at 1670.890 kb on + strand, within B158DRAFT_1609at 1670.955 kb on - strand, within B158DRAFT_1609at 1670.960 kb on + strand, within B158DRAFT_1609at 1670.962 kb on + strand, within B158DRAFT_1609at 1670.975 kb on - strand, within B158DRAFT_1609at 1670.975 kb on - strand, within B158DRAFT_1609at 1670.977 kb on + strand, within B158DRAFT_1609at 1670.977 kb on - strand, within B158DRAFT_1609at 1670.986 kb on + strand, within B158DRAFT_1609at 1671.071 kb on - strand, within B158DRAFT_1609at 1671.117 kb on + strand, within B158DRAFT_1609at 1671.117 kb on + strand, within B158DRAFT_1609at 1671.117 kb on + strand, within B158DRAFT_1609at 1671.117 kb on + strand, within B158DRAFT_1609at 1671.117 kb on + strand, within B158DRAFT_1609at 1671.125 kb on - strand, within B158DRAFT_1609at 1671.125 kb on - strand, within B158DRAFT_1609at 1671.143 kb on + strand, within B158DRAFT_1609at 1671.310 kb on - strand, within B158DRAFT_1609at 1671.369 kb on - strand, within B158DRAFT_1609

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM
remove
1,668,522 + B158DRAFT_1607 0.40 -1.1
1,668,530 - B158DRAFT_1607 0.40 -0.1
1,668,533 + B158DRAFT_1607 0.41 -0.8
1,668,533 + B158DRAFT_1607 0.41 -0.8
1,668,533 + B158DRAFT_1607 0.41 -0.5
1,668,533 + B158DRAFT_1607 0.41 -0.2
1,668,533 + B158DRAFT_1607 0.41 -0.5
1,668,533 + B158DRAFT_1607 0.41 +0.0
1,668,535 - B158DRAFT_1607 0.41 -0.2
1,668,535 - B158DRAFT_1607 0.41 -0.1
1,668,541 - B158DRAFT_1607 0.41 +0.3
1,668,541 - B158DRAFT_1607 0.41 -0.5
1,668,541 - B158DRAFT_1607 0.41 +0.2
1,668,541 - B158DRAFT_1607 0.41 -0.1
1,668,541 - B158DRAFT_1607 0.41 -0.4
1,668,604 + B158DRAFT_1607 0.45 -0.6
1,668,724 - B158DRAFT_1607 0.53 -0.2
1,668,731 + B158DRAFT_1607 0.53 +0.5
1,668,848 + B158DRAFT_1607 0.60 -0.7
1,668,856 - B158DRAFT_1607 0.61 +1.4
1,668,858 + B158DRAFT_1607 0.61 -0.2
1,668,858 + B158DRAFT_1607 0.61 +1.3
1,668,858 + B158DRAFT_1607 0.61 -0.1
1,668,858 + B158DRAFT_1607 0.61 +0.0
1,668,858 + B158DRAFT_1607 0.61 -0.5
1,668,858 + B158DRAFT_1607 0.61 -0.0
1,668,858 + B158DRAFT_1607 0.61 +0.5
1,668,858 + B158DRAFT_1607 0.61 -0.2
1,668,858 + B158DRAFT_1607 0.61 -0.1
1,668,858 + B158DRAFT_1607 0.61 +0.1
1,668,858 + B158DRAFT_1607 0.61 +1.4
1,668,858 + B158DRAFT_1607 0.61 +0.1
1,668,858 + B158DRAFT_1607 0.61 -0.3
1,668,858 + B158DRAFT_1607 0.61 +0.3
1,668,858 + B158DRAFT_1607 0.61 -1.3
1,668,866 - B158DRAFT_1607 0.61 +0.6
1,668,866 - B158DRAFT_1607 0.61 -0.1
1,668,866 - B158DRAFT_1607 0.61 +0.3
1,668,866 - B158DRAFT_1607 0.61 +0.9
1,668,866 - B158DRAFT_1607 0.61 -0.9
1,668,866 - B158DRAFT_1607 0.61 -0.8
1,668,866 - B158DRAFT_1607 0.61 -0.3
1,668,866 - B158DRAFT_1607 0.61 -0.4
1,668,866 - B158DRAFT_1607 0.61 +0.6
1,668,866 - B158DRAFT_1607 0.61 +0.2
1,668,866 - B158DRAFT_1607 0.61 -0.9
1,668,866 - B158DRAFT_1607 0.61 -0.3
1,668,866 - B158DRAFT_1607 0.61 -0.6
1,668,866 - B158DRAFT_1607 0.61 +0.4
1,668,866 - B158DRAFT_1607 0.61 +0.4
1,668,866 - B158DRAFT_1607 0.61 +0.0
1,668,866 - B158DRAFT_1607 0.61 -0.1
1,668,866 - B158DRAFT_1607 0.61 -0.8
1,668,866 - B158DRAFT_1607 0.61 -0.3
1,668,866 - B158DRAFT_1607 0.61 +0.6
1,668,866 - B158DRAFT_1607 0.61 -1.2
1,668,866 - B158DRAFT_1607 0.61 +0.1
1,668,866 - B158DRAFT_1607 0.61 +0.2
1,668,866 - B158DRAFT_1607 0.61 +0.7
1,668,866 - B158DRAFT_1607 0.61 -0.2
1,668,866 - B158DRAFT_1607 0.61 -0.2
1,668,866 - B158DRAFT_1607 0.61 -1.2
1,668,866 - B158DRAFT_1607 0.61 -1.7
1,668,866 - B158DRAFT_1607 0.61 -1.3
1,668,866 - B158DRAFT_1607 0.61 -1.1
1,668,866 - B158DRAFT_1607 0.61 +1.1
1,668,866 - B158DRAFT_1607 0.61 +0.9
1,668,866 - B158DRAFT_1607 0.61 -0.6
1,668,877 - B158DRAFT_1607 0.62 -0.0
1,668,951 + B158DRAFT_1607 0.67 -0.0
1,668,951 + B158DRAFT_1607 0.67 -0.3
1,668,951 + B158DRAFT_1607 0.67 -1.1
1,669,046 + B158DRAFT_1607 0.73 +1.0
1,669,054 + B158DRAFT_1607 0.73 +0.2
1,669,054 - B158DRAFT_1607 0.73 +1.0
1,669,059 - B158DRAFT_1607 0.73 -0.7
1,669,118 - B158DRAFT_1607 0.77 -0.6
1,669,179 - B158DRAFT_1607 0.81 +0.0
1,669,184 + B158DRAFT_1607 0.81 -0.1
1,669,208 + B158DRAFT_1607 0.83 -0.6
1,669,216 - B158DRAFT_1607 0.83 +0.4
1,669,221 - B158DRAFT_1607 0.84 -0.1
1,669,238 + B158DRAFT_1607 0.85 +0.3
1,669,238 + B158DRAFT_1607 0.85 -0.3
1,669,253 + B158DRAFT_1607 0.86 +0.1
1,669,253 + B158DRAFT_1607 0.86 +0.1
1,669,260 + B158DRAFT_1607 0.86 -0.2
1,669,261 - B158DRAFT_1607 0.86 -0.6
1,669,261 - B158DRAFT_1607 0.86 -0.2
1,669,261 - B158DRAFT_1607 0.86 -0.1
1,669,261 - B158DRAFT_1607 0.86 +0.3
1,669,261 - B158DRAFT_1607 0.86 -0.7
1,669,299 + B158DRAFT_1607 0.89 -0.4
1,669,307 - B158DRAFT_1607 0.89 -0.4
1,669,339 + -0.0
1,669,360 + -0.2
1,669,396 + -0.8
1,669,442 + -0.3
1,669,443 + -0.1
1,669,443 + -0.5
1,669,451 - -0.8
1,669,451 - -0.6
1,669,477 - +0.1
1,669,479 + -2.4
1,669,488 + -0.4
1,669,496 - -0.0
1,669,499 - -0.3
1,669,552 - +0.3
1,669,552 - +0.3
1,669,651 + B158DRAFT_1608 0.18 +0.2
1,669,657 - B158DRAFT_1608 0.18 +0.2
1,669,668 - B158DRAFT_1608 0.20 -0.3
1,669,785 + B158DRAFT_1608 0.33 -0.6
1,669,911 + B158DRAFT_1608 0.47 -0.4
1,669,911 - B158DRAFT_1608 0.47 +0.4
1,669,919 - B158DRAFT_1608 0.48 -0.0
1,669,926 + B158DRAFT_1608 0.49 +0.0
1,669,934 - B158DRAFT_1608 0.50 -0.7
1,669,964 + B158DRAFT_1608 0.53 +0.1
1,669,972 - B158DRAFT_1608 0.54 +0.3
1,669,972 - B158DRAFT_1608 0.54 -0.3
1,669,972 - B158DRAFT_1608 0.54 -0.3
1,669,972 - B158DRAFT_1608 0.54 -0.1
1,669,972 - B158DRAFT_1608 0.54 +0.2
1,669,972 - B158DRAFT_1608 0.54 -0.1
1,669,972 - B158DRAFT_1608 0.54 -0.2
1,669,977 - B158DRAFT_1608 0.54 +0.0
1,669,999 - B158DRAFT_1608 0.57 -0.9
1,670,038 + B158DRAFT_1608 0.61 +1.1
1,670,114 - B158DRAFT_1608 0.70 -0.5
1,670,117 + B158DRAFT_1608 0.70 -0.9
1,670,125 - B158DRAFT_1608 0.71 -2.0
1,670,203 + B158DRAFT_1608 0.80 +0.3
1,670,203 + B158DRAFT_1608 0.80 -0.5
1,670,211 - B158DRAFT_1608 0.81 +0.2
1,670,340 + -0.9
1,670,348 - +0.0
1,670,348 - +0.1
1,670,436 + -0.2
1,670,438 + +1.4
1,670,438 - -0.2
1,670,450 - -0.8
1,670,471 + +0.6
1,670,471 + -0.8
1,670,472 - -0.5
1,670,474 + +0.5
1,670,482 - -0.3
1,670,482 - -0.9
1,670,484 - -0.8
1,670,484 - -0.3
1,670,492 + -0.3
1,670,503 + -0.6
1,670,504 + -0.2
1,670,514 + -1.0
1,670,637 + B158DRAFT_1609 0.17 -0.6
1,670,637 + B158DRAFT_1609 0.17 +1.8
1,670,637 + B158DRAFT_1609 0.17 -3.4
1,670,651 + B158DRAFT_1609 0.18 -0.3
1,670,655 - B158DRAFT_1609 0.18 +0.6
1,670,661 + B158DRAFT_1609 0.19 +0.2
1,670,661 + B158DRAFT_1609 0.19 +0.2
1,670,661 + B158DRAFT_1609 0.19 -0.7
1,670,669 - B158DRAFT_1609 0.19 -0.2
1,670,681 + B158DRAFT_1609 0.20 +1.3
1,670,711 + B158DRAFT_1609 0.22 +0.1
1,670,719 - B158DRAFT_1609 0.23 -0.3
1,670,745 + B158DRAFT_1609 0.24 -0.2
1,670,784 + B158DRAFT_1609 0.27 +0.1
1,670,784 + B158DRAFT_1609 0.27 +0.2
1,670,792 - B158DRAFT_1609 0.27 +0.7
1,670,801 + B158DRAFT_1609 0.28 +0.2
1,670,801 + B158DRAFT_1609 0.28 -0.1
1,670,849 + B158DRAFT_1609 0.31 +1.0
1,670,883 + B158DRAFT_1609 0.33 +3.6
1,670,890 + B158DRAFT_1609 0.34 -1.2
1,670,955 - B158DRAFT_1609 0.38 -0.5
1,670,960 + B158DRAFT_1609 0.39 -1.1
1,670,962 + B158DRAFT_1609 0.39 +0.2
1,670,975 - B158DRAFT_1609 0.40 -0.6
1,670,975 - B158DRAFT_1609 0.40 +0.3
1,670,977 + B158DRAFT_1609 0.40 -0.5
1,670,977 - B158DRAFT_1609 0.40 +0.2
1,670,986 + B158DRAFT_1609 0.40 -0.3
1,671,071 - B158DRAFT_1609 0.46 -0.7
1,671,117 + B158DRAFT_1609 0.49 +1.5
1,671,117 + B158DRAFT_1609 0.49 -0.1
1,671,117 + B158DRAFT_1609 0.49 -0.3
1,671,117 + B158DRAFT_1609 0.49 +0.3
1,671,117 + B158DRAFT_1609 0.49 -0.7
1,671,125 - B158DRAFT_1609 0.49 -0.6
1,671,125 - B158DRAFT_1609 0.49 -0.1
1,671,143 + B158DRAFT_1609 0.51 -0.1
1,671,310 - B158DRAFT_1609 0.62 +0.4
1,671,369 - B158DRAFT_1609 0.66 +0.3

Or see this region's nucleotide sequence