Experiment: m.b. nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1505 and B158DRAFT_1506 are separated by 57 nucleotides B158DRAFT_1506 and B158DRAFT_1507 are separated by 152 nucleotides B158DRAFT_1507 and B158DRAFT_1508 are separated by 18 nucleotides
B158DRAFT_1505: B158DRAFT_1505 - ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92), at 1,560,284 to 1,562,548
_1505
B158DRAFT_1506: B158DRAFT_1506 - translation initiation factor IF-1, at 1,562,606 to 1,562,824
_1506
B158DRAFT_1507: B158DRAFT_1507 - Putative arginyl-tRNA:protein arginylyltransferase, at 1,562,977 to 1,563,723
_1507
B158DRAFT_1508: B158DRAFT_1508 - leucyl/phenylalanyl-tRNA--protein transferase, at 1,563,742 to 1,564,455
_1508
Position (kb)
1562
1563 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1561.695 kb on + strand, within B158DRAFT_1505 at 1561.710 kb on + strand, within B158DRAFT_1505 at 1561.713 kb on - strand, within B158DRAFT_1505 at 1561.729 kb on + strand, within B158DRAFT_1505 at 1561.729 kb on + strand, within B158DRAFT_1505 at 1561.729 kb on + strand, within B158DRAFT_1505 at 1561.737 kb on - strand, within B158DRAFT_1505 at 1561.762 kb on + strand, within B158DRAFT_1505 at 1561.762 kb on + strand, within B158DRAFT_1505 at 1561.774 kb on + strand, within B158DRAFT_1505 at 1561.805 kb on + strand, within B158DRAFT_1505 at 1561.815 kb on + strand, within B158DRAFT_1505 at 1561.823 kb on - strand, within B158DRAFT_1505 at 1561.823 kb on - strand, within B158DRAFT_1505 at 1561.823 kb on - strand, within B158DRAFT_1505 at 1561.823 kb on - strand, within B158DRAFT_1505 at 1561.828 kb on - strand, within B158DRAFT_1505 at 1561.886 kb on + strand, within B158DRAFT_1505 at 1561.886 kb on + strand, within B158DRAFT_1505 at 1561.886 kb on + strand, within B158DRAFT_1505 at 1561.894 kb on - strand, within B158DRAFT_1505 at 1561.894 kb on - strand, within B158DRAFT_1505 at 1561.894 kb on - strand, within B158DRAFT_1505 at 1561.894 kb on - strand, within B158DRAFT_1505 at 1561.894 kb on - strand, within B158DRAFT_1505 at 1561.902 kb on + strand, within B158DRAFT_1505 at 1561.902 kb on + strand, within B158DRAFT_1505 at 1561.910 kb on - strand, within B158DRAFT_1505 at 1561.910 kb on - strand, within B158DRAFT_1505 at 1561.910 kb on - strand, within B158DRAFT_1505 at 1561.924 kb on + strand, within B158DRAFT_1505 at 1561.953 kb on + strand, within B158DRAFT_1505 at 1562.008 kb on + strand, within B158DRAFT_1505 at 1562.014 kb on + strand, within B158DRAFT_1505 at 1562.014 kb on + strand, within B158DRAFT_1505 at 1562.025 kb on + strand, within B158DRAFT_1505 at 1562.025 kb on + strand, within B158DRAFT_1505 at 1562.031 kb on - strand, within B158DRAFT_1505 at 1562.033 kb on - strand, within B158DRAFT_1505 at 1562.036 kb on + strand, within B158DRAFT_1505 at 1562.075 kb on + strand, within B158DRAFT_1505 at 1562.080 kb on + strand, within B158DRAFT_1505 at 1562.097 kb on - strand, within B158DRAFT_1505 at 1562.130 kb on + strand, within B158DRAFT_1505 at 1562.138 kb on + strand, within B158DRAFT_1505 at 1562.213 kb on - strand, within B158DRAFT_1505 at 1562.254 kb on + strand, within B158DRAFT_1505 at 1562.282 kb on + strand, within B158DRAFT_1505 at 1562.282 kb on + strand, within B158DRAFT_1505 at 1562.282 kb on + strand, within B158DRAFT_1505 at 1562.282 kb on + strand, within B158DRAFT_1505 at 1562.333 kb on + strand at 1562.341 kb on - strand at 1562.343 kb on + strand at 1562.343 kb on + strand at 1562.343 kb on + strand at 1562.343 kb on + strand at 1562.343 kb on + strand at 1562.343 kb on + strand at 1562.343 kb on + strand at 1562.343 kb on + strand at 1562.343 kb on + strand at 1562.344 kb on - strand at 1562.351 kb on - strand at 1562.351 kb on - strand at 1562.351 kb on - strand at 1562.351 kb on - strand at 1562.351 kb on - strand at 1562.351 kb on - strand at 1562.353 kb on + strand at 1562.361 kb on - strand at 1562.361 kb on - strand at 1562.368 kb on + strand at 1562.371 kb on + strand at 1562.376 kb on - strand at 1562.379 kb on - strand at 1562.379 kb on - strand at 1562.379 kb on - strand at 1562.458 kb on + strand at 1562.467 kb on + strand at 1562.475 kb on - strand at 1562.604 kb on + strand at 1562.955 kb on + strand at 1562.970 kb on + strand at 1562.977 kb on - strand at 1562.985 kb on + strand at 1563.031 kb on + strand at 1563.060 kb on - strand, within B158DRAFT_1507 at 1563.107 kb on + strand, within B158DRAFT_1507 at 1563.110 kb on - strand, within B158DRAFT_1507 at 1563.110 kb on - strand, within B158DRAFT_1507 at 1563.114 kb on - strand, within B158DRAFT_1507 at 1563.115 kb on - strand, within B158DRAFT_1507 at 1563.115 kb on - strand, within B158DRAFT_1507 at 1563.143 kb on - strand, within B158DRAFT_1507 at 1563.224 kb on - strand, within B158DRAFT_1507 at 1563.253 kb on + strand, within B158DRAFT_1507 at 1563.253 kb on + strand, within B158DRAFT_1507 at 1563.254 kb on - strand, within B158DRAFT_1507 at 1563.254 kb on - strand, within B158DRAFT_1507 at 1563.261 kb on - strand, within B158DRAFT_1507 at 1563.277 kb on + strand, within B158DRAFT_1507 at 1563.277 kb on + strand, within B158DRAFT_1507 at 1563.277 kb on + strand, within B158DRAFT_1507 at 1563.285 kb on - strand, within B158DRAFT_1507 at 1563.285 kb on - strand, within B158DRAFT_1507 at 1563.287 kb on + strand, within B158DRAFT_1507 at 1563.287 kb on + strand, within B158DRAFT_1507 at 1563.287 kb on + strand, within B158DRAFT_1507 at 1563.287 kb on + strand, within B158DRAFT_1507 at 1563.287 kb on + strand, within B158DRAFT_1507 at 1563.287 kb on + strand, within B158DRAFT_1507 at 1563.287 kb on + strand, within B158DRAFT_1507 at 1563.287 kb on + strand, within B158DRAFT_1507 at 1563.287 kb on + strand, within B158DRAFT_1507 at 1563.287 kb on + strand, within B158DRAFT_1507 at 1563.295 kb on - strand, within B158DRAFT_1507 at 1563.295 kb on - strand, within B158DRAFT_1507 at 1563.295 kb on - strand, within B158DRAFT_1507 at 1563.295 kb on - strand, within B158DRAFT_1507 at 1563.295 kb on - strand, within B158DRAFT_1507 at 1563.295 kb on - strand, within B158DRAFT_1507 at 1563.295 kb on - strand, within B158DRAFT_1507 at 1563.295 kb on - strand, within B158DRAFT_1507 at 1563.295 kb on - strand, within B158DRAFT_1507 at 1563.364 kb on - strand, within B158DRAFT_1507 at 1563.364 kb on - strand, within B158DRAFT_1507 at 1563.364 kb on - strand, within B158DRAFT_1507 at 1563.366 kb on + strand, within B158DRAFT_1507 at 1563.366 kb on + strand, within B158DRAFT_1507 at 1563.368 kb on + strand, within B158DRAFT_1507 at 1563.374 kb on - strand, within B158DRAFT_1507 at 1563.374 kb on - strand, within B158DRAFT_1507 at 1563.374 kb on - strand, within B158DRAFT_1507 at 1563.374 kb on - strand, within B158DRAFT_1507 at 1563.376 kb on - strand, within B158DRAFT_1507 at 1563.379 kb on - strand, within B158DRAFT_1507 at 1563.407 kb on + strand, within B158DRAFT_1507 at 1563.408 kb on - strand, within B158DRAFT_1507 at 1563.473 kb on - strand, within B158DRAFT_1507 at 1563.475 kb on + strand, within B158DRAFT_1507 at 1563.481 kb on + strand, within B158DRAFT_1507 at 1563.489 kb on - strand, within B158DRAFT_1507 at 1563.512 kb on - strand, within B158DRAFT_1507 at 1563.513 kb on + strand, within B158DRAFT_1507 at 1563.513 kb on + strand, within B158DRAFT_1507 at 1563.513 kb on + strand, within B158DRAFT_1507 at 1563.515 kb on + strand, within B158DRAFT_1507 at 1563.515 kb on + strand, within B158DRAFT_1507 at 1563.523 kb on - strand, within B158DRAFT_1507 at 1563.577 kb on + strand, within B158DRAFT_1507 at 1563.664 kb on + strand at 1563.664 kb on + strand at 1563.664 kb on + strand at 1563.669 kb on + strand at 1563.677 kb on - strand at 1563.688 kb on - strand at 1563.696 kb on + strand at 1563.696 kb on + strand at 1563.696 kb on + strand at 1563.729 kb on - strand at 1563.780 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM remove 1,561,695 + B158DRAFT_1505 0.62 +0.9 1,561,710 + B158DRAFT_1505 0.63 +1.2 1,561,713 - B158DRAFT_1505 0.63 +0.7 1,561,729 + B158DRAFT_1505 0.64 +1.0 1,561,729 + B158DRAFT_1505 0.64 +1.1 1,561,729 + B158DRAFT_1505 0.64 +0.9 1,561,737 - B158DRAFT_1505 0.64 +0.8 1,561,762 + B158DRAFT_1505 0.65 +1.3 1,561,762 + B158DRAFT_1505 0.65 +0.6 1,561,774 + B158DRAFT_1505 0.66 +0.7 1,561,805 + B158DRAFT_1505 0.67 +0.9 1,561,815 + B158DRAFT_1505 0.68 +1.9 1,561,823 - B158DRAFT_1505 0.68 +1.0 1,561,823 - B158DRAFT_1505 0.68 +0.9 1,561,823 - B158DRAFT_1505 0.68 +1.4 1,561,823 - B158DRAFT_1505 0.68 +0.8 1,561,828 - B158DRAFT_1505 0.68 +1.0 1,561,886 + B158DRAFT_1505 0.71 +1.1 1,561,886 + B158DRAFT_1505 0.71 +1.4 1,561,886 + B158DRAFT_1505 0.71 +1.4 1,561,894 - B158DRAFT_1505 0.71 +1.2 1,561,894 - B158DRAFT_1505 0.71 +1.4 1,561,894 - B158DRAFT_1505 0.71 +0.5 1,561,894 - B158DRAFT_1505 0.71 +0.6 1,561,894 - B158DRAFT_1505 0.71 +1.0 1,561,902 + B158DRAFT_1505 0.71 +0.8 1,561,902 + B158DRAFT_1505 0.71 +0.3 1,561,910 - B158DRAFT_1505 0.72 +0.8 1,561,910 - B158DRAFT_1505 0.72 +0.2 1,561,910 - B158DRAFT_1505 0.72 +0.3 1,561,924 + B158DRAFT_1505 0.72 -0.3 1,561,953 + B158DRAFT_1505 0.74 +0.8 1,562,008 + B158DRAFT_1505 0.76 +1.1 1,562,014 + B158DRAFT_1505 0.76 +0.9 1,562,014 + B158DRAFT_1505 0.76 +0.8 1,562,025 + B158DRAFT_1505 0.77 +1.8 1,562,025 + B158DRAFT_1505 0.77 +1.2 1,562,031 - B158DRAFT_1505 0.77 +1.4 1,562,033 - B158DRAFT_1505 0.77 +0.8 1,562,036 + B158DRAFT_1505 0.77 +0.4 1,562,075 + B158DRAFT_1505 0.79 +1.4 1,562,080 + B158DRAFT_1505 0.79 +1.2 1,562,097 - B158DRAFT_1505 0.80 +1.1 1,562,130 + B158DRAFT_1505 0.82 +0.7 1,562,138 + B158DRAFT_1505 0.82 +1.2 1,562,213 - B158DRAFT_1505 0.85 +0.6 1,562,254 + B158DRAFT_1505 0.87 +0.6 1,562,282 + B158DRAFT_1505 0.88 +0.8 1,562,282 + B158DRAFT_1505 0.88 +0.9 1,562,282 + B158DRAFT_1505 0.88 +0.9 1,562,282 + B158DRAFT_1505 0.88 +1.0 1,562,333 + +0.6 1,562,341 - +0.6 1,562,343 + +0.7 1,562,343 + +1.3 1,562,343 + +0.6 1,562,343 + +1.1 1,562,343 + +0.7 1,562,343 + -0.2 1,562,343 + +0.9 1,562,343 + +1.0 1,562,343 + +0.6 1,562,344 - +1.7 1,562,351 - +0.8 1,562,351 - +0.7 1,562,351 - +0.9 1,562,351 - +2.0 1,562,351 - +0.8 1,562,351 - +0.4 1,562,353 + +1.4 1,562,361 - +1.0 1,562,361 - +0.3 1,562,368 + +0.2 1,562,371 + +0.4 1,562,376 - +1.3 1,562,379 - +0.0 1,562,379 - +1.0 1,562,379 - +1.5 1,562,458 + +0.6 1,562,467 + +1.1 1,562,475 - +0.9 1,562,604 + +0.6 1,562,955 + +0.6 1,562,970 + -0.0 1,562,977 - +0.2 1,562,985 + -1.6 1,563,031 + -0.9 1,563,060 - B158DRAFT_1507 0.11 -0.3 1,563,107 + B158DRAFT_1507 0.17 +0.2 1,563,110 - B158DRAFT_1507 0.18 -0.9 1,563,110 - B158DRAFT_1507 0.18 -0.3 1,563,114 - B158DRAFT_1507 0.18 -0.8 1,563,115 - B158DRAFT_1507 0.18 -0.2 1,563,115 - B158DRAFT_1507 0.18 +0.1 1,563,143 - B158DRAFT_1507 0.22 +0.7 1,563,224 - B158DRAFT_1507 0.33 -0.2 1,563,253 + B158DRAFT_1507 0.37 -0.3 1,563,253 + B158DRAFT_1507 0.37 +0.2 1,563,254 - B158DRAFT_1507 0.37 +1.5 1,563,254 - B158DRAFT_1507 0.37 -0.3 1,563,261 - B158DRAFT_1507 0.38 -0.3 1,563,277 + B158DRAFT_1507 0.40 +1.3 1,563,277 + B158DRAFT_1507 0.40 +0.1 1,563,277 + B158DRAFT_1507 0.40 -0.2 1,563,285 - B158DRAFT_1507 0.41 -0.1 1,563,285 - B158DRAFT_1507 0.41 -1.0 1,563,287 + B158DRAFT_1507 0.41 -0.1 1,563,287 + B158DRAFT_1507 0.41 +0.6 1,563,287 + B158DRAFT_1507 0.41 -0.2 1,563,287 + B158DRAFT_1507 0.41 -0.3 1,563,287 + B158DRAFT_1507 0.41 +0.2 1,563,287 + B158DRAFT_1507 0.41 -1.1 1,563,287 + B158DRAFT_1507 0.41 +0.3 1,563,287 + B158DRAFT_1507 0.41 -1.0 1,563,287 + B158DRAFT_1507 0.41 +0.7 1,563,287 + B158DRAFT_1507 0.41 +1.1 1,563,295 - B158DRAFT_1507 0.43 -0.3 1,563,295 - B158DRAFT_1507 0.43 -0.2 1,563,295 - B158DRAFT_1507 0.43 -0.1 1,563,295 - B158DRAFT_1507 0.43 -0.3 1,563,295 - B158DRAFT_1507 0.43 +1.0 1,563,295 - B158DRAFT_1507 0.43 +0.0 1,563,295 - B158DRAFT_1507 0.43 -0.0 1,563,295 - B158DRAFT_1507 0.43 -0.4 1,563,295 - B158DRAFT_1507 0.43 -0.6 1,563,364 - B158DRAFT_1507 0.52 +0.2 1,563,364 - B158DRAFT_1507 0.52 -0.7 1,563,364 - B158DRAFT_1507 0.52 -0.2 1,563,366 + B158DRAFT_1507 0.52 -0.1 1,563,366 + B158DRAFT_1507 0.52 +0.9 1,563,368 + B158DRAFT_1507 0.52 -0.4 1,563,374 - B158DRAFT_1507 0.53 +0.8 1,563,374 - B158DRAFT_1507 0.53 +0.8 1,563,374 - B158DRAFT_1507 0.53 +0.6 1,563,374 - B158DRAFT_1507 0.53 -0.2 1,563,376 - B158DRAFT_1507 0.53 -0.2 1,563,379 - B158DRAFT_1507 0.54 +1.2 1,563,407 + B158DRAFT_1507 0.58 -0.7 1,563,408 - B158DRAFT_1507 0.58 +0.4 1,563,473 - B158DRAFT_1507 0.66 +0.2 1,563,475 + B158DRAFT_1507 0.67 -0.1 1,563,481 + B158DRAFT_1507 0.67 -0.6 1,563,489 - B158DRAFT_1507 0.69 -1.5 1,563,512 - B158DRAFT_1507 0.72 +0.0 1,563,513 + B158DRAFT_1507 0.72 +0.0 1,563,513 + B158DRAFT_1507 0.72 +0.0 1,563,513 + B158DRAFT_1507 0.72 +0.1 1,563,515 + B158DRAFT_1507 0.72 -0.8 1,563,515 + B158DRAFT_1507 0.72 +0.7 1,563,523 - B158DRAFT_1507 0.73 -0.1 1,563,577 + B158DRAFT_1507 0.80 -0.6 1,563,664 + +1.0 1,563,664 + -1.3 1,563,664 + -0.0 1,563,669 + +0.2 1,563,677 - +0.1 1,563,688 - -0.4 1,563,696 + -1.8 1,563,696 + -1.9 1,563,696 + -2.3 1,563,729 - -1.2 1,563,780 + -0.7
Or see this region's nucleotide sequence