Experiment: m.b. nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1235 and B158DRAFT_1236 are separated by 316 nucleotides B158DRAFT_1236 and B158DRAFT_1237 are separated by 11 nucleotides B158DRAFT_1237 and B158DRAFT_1238 are separated by 29 nucleotides
B158DRAFT_1235: B158DRAFT_1235 - Peroxiredoxin, at 1,273,013 to 1,273,618
_1235
B158DRAFT_1236: B158DRAFT_1236 - hypothetical protein, at 1,273,935 to 1,275,020
_1236
B158DRAFT_1237: B158DRAFT_1237 - hypothetical protein, at 1,275,032 to 1,275,466
_1237
B158DRAFT_1238: B158DRAFT_1238 - Asparaginase, at 1,275,496 to 1,276,518
_1238
Position (kb)
1273
1274
1275
1276 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1273.061 kb on + strand at 1273.061 kb on + strand at 1273.061 kb on + strand at 1273.061 kb on + strand at 1273.069 kb on - strand at 1273.069 kb on - strand at 1273.069 kb on - strand at 1273.069 kb on - strand at 1273.088 kb on + strand, within B158DRAFT_1235 at 1273.142 kb on + strand, within B158DRAFT_1235 at 1273.142 kb on + strand, within B158DRAFT_1235 at 1273.142 kb on + strand, within B158DRAFT_1235 at 1273.150 kb on - strand, within B158DRAFT_1235 at 1273.150 kb on - strand, within B158DRAFT_1235 at 1273.202 kb on - strand, within B158DRAFT_1235 at 1273.218 kb on + strand, within B158DRAFT_1235 at 1273.218 kb on + strand, within B158DRAFT_1235 at 1273.218 kb on + strand, within B158DRAFT_1235 at 1273.221 kb on - strand, within B158DRAFT_1235 at 1273.226 kb on - strand at 1273.270 kb on + strand, within B158DRAFT_1235 at 1273.270 kb on + strand, within B158DRAFT_1235 at 1273.270 kb on + strand, within B158DRAFT_1235 at 1273.270 kb on + strand, within B158DRAFT_1235 at 1273.270 kb on + strand, within B158DRAFT_1235 at 1273.270 kb on + strand, within B158DRAFT_1235 at 1273.278 kb on - strand, within B158DRAFT_1235 at 1273.278 kb on - strand, within B158DRAFT_1235 at 1273.278 kb on - strand, within B158DRAFT_1235 at 1273.308 kb on - strand, within B158DRAFT_1235 at 1273.310 kb on + strand, within B158DRAFT_1235 at 1273.446 kb on - strand, within B158DRAFT_1235 at 1273.496 kb on + strand, within B158DRAFT_1235 at 1273.496 kb on + strand, within B158DRAFT_1235 at 1273.496 kb on + strand, within B158DRAFT_1235 at 1273.496 kb on + strand, within B158DRAFT_1235 at 1273.588 kb on + strand at 1273.588 kb on + strand at 1273.588 kb on + strand at 1273.596 kb on - strand at 1273.596 kb on - strand at 1273.596 kb on - strand at 1273.596 kb on - strand at 1273.668 kb on + strand at 1273.717 kb on + strand at 1273.834 kb on - strand at 1273.834 kb on - strand at 1273.916 kb on - strand at 1273.916 kb on - strand at 1274.083 kb on + strand, within B158DRAFT_1236 at 1274.244 kb on + strand, within B158DRAFT_1236 at 1274.420 kb on + strand, within B158DRAFT_1236 at 1274.433 kb on - strand, within B158DRAFT_1236 at 1274.594 kb on + strand, within B158DRAFT_1236 at 1274.602 kb on - strand, within B158DRAFT_1236 at 1274.711 kb on + strand, within B158DRAFT_1236 at 1274.727 kb on - strand, within B158DRAFT_1236 at 1274.727 kb on - strand, within B158DRAFT_1236 at 1274.745 kb on - strand, within B158DRAFT_1236 at 1274.872 kb on + strand, within B158DRAFT_1236 at 1274.878 kb on + strand, within B158DRAFT_1236 at 1275.015 kb on + strand at 1275.244 kb on + strand, within B158DRAFT_1237 at 1275.244 kb on + strand, within B158DRAFT_1237 at 1275.244 kb on + strand, within B158DRAFT_1237 at 1275.252 kb on - strand, within B158DRAFT_1237 at 1275.252 kb on - strand, within B158DRAFT_1237 at 1275.310 kb on - strand, within B158DRAFT_1237 at 1275.337 kb on + strand, within B158DRAFT_1237 at 1275.337 kb on + strand, within B158DRAFT_1237 at 1275.344 kb on - strand, within B158DRAFT_1237 at 1275.386 kb on - strand, within B158DRAFT_1237 at 1275.526 kb on - strand at 1275.548 kb on + strand at 1275.548 kb on + strand at 1275.566 kb on + strand at 1275.568 kb on + strand at 1275.634 kb on - strand, within B158DRAFT_1238 at 1275.640 kb on - strand, within B158DRAFT_1238 at 1275.676 kb on + strand, within B158DRAFT_1238 at 1275.684 kb on - strand, within B158DRAFT_1238 at 1275.684 kb on - strand, within B158DRAFT_1238 at 1275.684 kb on - strand, within B158DRAFT_1238 at 1275.723 kb on - strand, within B158DRAFT_1238 at 1275.774 kb on + strand, within B158DRAFT_1238 at 1275.848 kb on + strand, within B158DRAFT_1238 at 1275.854 kb on - strand, within B158DRAFT_1238 at 1275.888 kb on + strand, within B158DRAFT_1238 at 1275.888 kb on + strand, within B158DRAFT_1238 at 1275.896 kb on - strand, within B158DRAFT_1238 at 1275.948 kb on + strand, within B158DRAFT_1238 at 1275.994 kb on - strand, within B158DRAFT_1238
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM remove 1,273,061 + +0.8 1,273,061 + +0.7 1,273,061 + -0.0 1,273,061 + +0.2 1,273,069 - +1.1 1,273,069 - +0.1 1,273,069 - +0.0 1,273,069 - -0.2 1,273,088 + B158DRAFT_1235 0.12 +0.2 1,273,142 + B158DRAFT_1235 0.21 +0.2 1,273,142 + B158DRAFT_1235 0.21 +1.1 1,273,142 + B158DRAFT_1235 0.21 -0.8 1,273,150 - B158DRAFT_1235 0.23 -0.1 1,273,150 - B158DRAFT_1235 0.23 -0.1 1,273,202 - B158DRAFT_1235 0.31 +0.3 1,273,218 + B158DRAFT_1235 0.34 -0.0 1,273,218 + B158DRAFT_1235 0.34 -0.1 1,273,218 + B158DRAFT_1235 0.34 +0.2 1,273,221 - B158DRAFT_1235 0.34 -0.2 1,273,226 - +2.1 1,273,270 + B158DRAFT_1235 0.42 -0.1 1,273,270 + B158DRAFT_1235 0.42 -0.5 1,273,270 + B158DRAFT_1235 0.42 +0.3 1,273,270 + B158DRAFT_1235 0.42 -0.3 1,273,270 + B158DRAFT_1235 0.42 +0.0 1,273,270 + B158DRAFT_1235 0.42 -0.0 1,273,278 - B158DRAFT_1235 0.44 +0.2 1,273,278 - B158DRAFT_1235 0.44 +2.6 1,273,278 - B158DRAFT_1235 0.44 -1.0 1,273,308 - B158DRAFT_1235 0.49 -1.8 1,273,310 + B158DRAFT_1235 0.49 +0.1 1,273,446 - B158DRAFT_1235 0.71 -0.6 1,273,496 + B158DRAFT_1235 0.80 -0.8 1,273,496 + B158DRAFT_1235 0.80 -0.3 1,273,496 + B158DRAFT_1235 0.80 +0.4 1,273,496 + B158DRAFT_1235 0.80 +1.3 1,273,588 + -0.7 1,273,588 + -0.1 1,273,588 + +0.3 1,273,596 - +0.0 1,273,596 - +0.3 1,273,596 - -2.0 1,273,596 - -0.4 1,273,668 + -0.3 1,273,717 + -0.9 1,273,834 - +0.1 1,273,834 - -0.2 1,273,916 - -1.3 1,273,916 - -0.1 1,274,083 + B158DRAFT_1236 0.14 +0.3 1,274,244 + B158DRAFT_1236 0.28 -0.2 1,274,420 + B158DRAFT_1236 0.45 -0.8 1,274,433 - B158DRAFT_1236 0.46 -0.6 1,274,594 + B158DRAFT_1236 0.61 -0.3 1,274,602 - B158DRAFT_1236 0.61 +0.1 1,274,711 + B158DRAFT_1236 0.71 -0.4 1,274,727 - B158DRAFT_1236 0.73 -0.9 1,274,727 - B158DRAFT_1236 0.73 +0.0 1,274,745 - B158DRAFT_1236 0.75 -0.5 1,274,872 + B158DRAFT_1236 0.86 +0.2 1,274,878 + B158DRAFT_1236 0.87 -0.6 1,275,015 + -0.4 1,275,244 + B158DRAFT_1237 0.49 -1.2 1,275,244 + B158DRAFT_1237 0.49 -0.3 1,275,244 + B158DRAFT_1237 0.49 +0.0 1,275,252 - B158DRAFT_1237 0.51 -0.2 1,275,252 - B158DRAFT_1237 0.51 -0.3 1,275,310 - B158DRAFT_1237 0.64 -0.3 1,275,337 + B158DRAFT_1237 0.70 -0.2 1,275,337 + B158DRAFT_1237 0.70 +0.1 1,275,344 - B158DRAFT_1237 0.72 -1.1 1,275,386 - B158DRAFT_1237 0.81 -0.5 1,275,526 - +0.4 1,275,548 + -0.1 1,275,548 + +0.1 1,275,566 + +0.2 1,275,568 + +0.1 1,275,634 - B158DRAFT_1238 0.13 +0.1 1,275,640 - B158DRAFT_1238 0.14 -0.1 1,275,676 + B158DRAFT_1238 0.18 -0.9 1,275,684 - B158DRAFT_1238 0.18 -0.9 1,275,684 - B158DRAFT_1238 0.18 -0.3 1,275,684 - B158DRAFT_1238 0.18 -0.5 1,275,723 - B158DRAFT_1238 0.22 -0.1 1,275,774 + B158DRAFT_1238 0.27 -0.1 1,275,848 + B158DRAFT_1238 0.34 +0.2 1,275,854 - B158DRAFT_1238 0.35 +0.5 1,275,888 + B158DRAFT_1238 0.38 +0.4 1,275,888 + B158DRAFT_1238 0.38 -0.2 1,275,896 - B158DRAFT_1238 0.39 -1.0 1,275,948 + B158DRAFT_1238 0.44 -0.5 1,275,994 - B158DRAFT_1238 0.49 +0.1
Or see this region's nucleotide sequence