Experiment: m.b. nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1081 and B158DRAFT_1082 are separated by 60 nucleotides B158DRAFT_1082 and B158DRAFT_1083 are separated by 102 nucleotides B158DRAFT_1083 and B158DRAFT_1084 are separated by 87 nucleotides B158DRAFT_1084 and B158DRAFT_1085 are separated by 3 nucleotides
B158DRAFT_1081: B158DRAFT_1081 - translation elongation factor Ts, at 1,118,374 to 1,119,243
_1081
B158DRAFT_1082: B158DRAFT_1082 - uridylate kinase (EC 2.7.4.22), at 1,119,304 to 1,120,020
_1082
B158DRAFT_1083: B158DRAFT_1083 - ribosome recycling factor, at 1,120,123 to 1,120,680
_1083
B158DRAFT_1084: B158DRAFT_1084 - undecaprenyl diphosphate synthase, at 1,120,768 to 1,121,490
_1084
B158DRAFT_1085: B158DRAFT_1085 - CDP-diglyceride synthetase, at 1,121,494 to 1,122,384
_1085
Position (kb) 1120
1121 Strain fitness (log2 ratio) -1
0
1 at 1119.254 kb on + strand at 1119.267 kb on + strand at 1119.464 kb on - strand, within B158DRAFT_1082 at 1120.017 kb on - strand at 1120.019 kb on + strand at 1120.052 kb on + strand at 1120.711 kb on + strand at 1120.711 kb on + strand at 1120.711 kb on + strand at 1121.475 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM remove 1,119,254 + -0.5 1,119,267 + -0.1 1,119,464 - B158DRAFT_1082 0.22 +0.2 1,120,017 - -1.2 1,120,019 + -0.2 1,120,052 + -0.8 1,120,711 + -0.3 1,120,711 + +0.5 1,120,711 + -0.9 1,121,475 + -0.6
Or see this region's nucleotide sequence