Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0633

Experiment: m.b. nitrate 200 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0631 and B158DRAFT_0632 are separated by 19 nucleotidesB158DRAFT_0632 and B158DRAFT_0633 are separated by 47 nucleotidesB158DRAFT_0633 and B158DRAFT_0634 are separated by 59 nucleotidesB158DRAFT_0634 and B158DRAFT_0635 are separated by 147 nucleotides B158DRAFT_0631: B158DRAFT_0631 - Signal transduction histidine kinase, at 639,651 to 640,949 _0631 B158DRAFT_0632: B158DRAFT_0632 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 640,969 to 641,655 _0632 B158DRAFT_0633: B158DRAFT_0633 - putative RNA-binding protein, YhbY family, at 641,703 to 642,032 _0633 B158DRAFT_0634: B158DRAFT_0634 - 23S rRNA Um-2552 2'-O-methyltransferase (EC 2.1.1.166), at 642,092 to 642,712 _0634 B158DRAFT_0635: B158DRAFT_0635 - ATP-dependent metalloprotease FtsH, at 642,860 to 644,785 _0635 Position (kb) 641 642 643Strain fitness (log2 ratio) -2 -1 0 1 2at 640.807 kb on + strand, within B158DRAFT_0631at 640.817 kb on + strand, within B158DRAFT_0631at 640.817 kb on + strand, within B158DRAFT_0631at 640.825 kb on + strandat 640.825 kb on + strandat 640.825 kb on - strandat 640.833 kb on - strandat 640.833 kb on - strandat 640.858 kb on + strandat 641.010 kb on - strandat 641.020 kb on + strandat 641.020 kb on + strandat 641.062 kb on + strand, within B158DRAFT_0632at 641.070 kb on - strand, within B158DRAFT_0632at 641.105 kb on + strand, within B158DRAFT_0632at 641.117 kb on + strand, within B158DRAFT_0632at 641.134 kb on + strand, within B158DRAFT_0632at 641.135 kb on - strand, within B158DRAFT_0632at 641.135 kb on - strand, within B158DRAFT_0632at 641.142 kb on - strand, within B158DRAFT_0632at 641.184 kb on - strand, within B158DRAFT_0632at 641.184 kb on - strand, within B158DRAFT_0632at 641.285 kb on + strand, within B158DRAFT_0632at 641.306 kb on + strand, within B158DRAFT_0632at 641.316 kb on - strand, within B158DRAFT_0632at 641.400 kb on + strand, within B158DRAFT_0632at 641.408 kb on - strand, within B158DRAFT_0632at 641.468 kb on - strand, within B158DRAFT_0632at 641.511 kb on - strand, within B158DRAFT_0632at 641.518 kb on - strand, within B158DRAFT_0632at 641.535 kb on + strand, within B158DRAFT_0632at 641.535 kb on + strand, within B158DRAFT_0632at 641.535 kb on + strand, within B158DRAFT_0632at 641.556 kb on + strand, within B158DRAFT_0632at 641.635 kb on - strandat 641.680 kb on + strandat 641.688 kb on - strandat 641.688 kb on - strandat 641.761 kb on - strand, within B158DRAFT_0633at 641.782 kb on + strand, within B158DRAFT_0633at 641.790 kb on - strand, within B158DRAFT_0633at 641.790 kb on - strand, within B158DRAFT_0633at 641.809 kb on + strand, within B158DRAFT_0633at 641.817 kb on - strand, within B158DRAFT_0633at 641.854 kb on - strand, within B158DRAFT_0633at 641.914 kb on - strand, within B158DRAFT_0633at 641.946 kb on + strand, within B158DRAFT_0633at 641.946 kb on + strand, within B158DRAFT_0633at 641.946 kb on + strand, within B158DRAFT_0633at 641.954 kb on - strand, within B158DRAFT_0633at 641.985 kb on + strand, within B158DRAFT_0633at 642.115 kb on + strandat 642.195 kb on + strand, within B158DRAFT_0634at 642.195 kb on + strand, within B158DRAFT_0634at 642.237 kb on + strand, within B158DRAFT_0634at 642.245 kb on + strand, within B158DRAFT_0634at 642.261 kb on - strand, within B158DRAFT_0634at 642.290 kb on + strand, within B158DRAFT_0634at 642.290 kb on + strand, within B158DRAFT_0634at 642.310 kb on + strand, within B158DRAFT_0634at 642.371 kb on - strand, within B158DRAFT_0634at 642.427 kb on + strand, within B158DRAFT_0634at 642.427 kb on + strand, within B158DRAFT_0634at 642.427 kb on + strand, within B158DRAFT_0634at 642.427 kb on + strand, within B158DRAFT_0634at 642.427 kb on + strand, within B158DRAFT_0634at 642.435 kb on - strand, within B158DRAFT_0634at 642.435 kb on - strand, within B158DRAFT_0634at 642.435 kb on - strand, within B158DRAFT_0634at 642.435 kb on - strand, within B158DRAFT_0634at 642.435 kb on - strand, within B158DRAFT_0634at 642.435 kb on - strand, within B158DRAFT_0634at 642.435 kb on - strand, within B158DRAFT_0634at 642.440 kb on - strand, within B158DRAFT_0634at 642.493 kb on + strand, within B158DRAFT_0634at 642.493 kb on + strand, within B158DRAFT_0634at 642.501 kb on - strand, within B158DRAFT_0634at 642.521 kb on + strand, within B158DRAFT_0634at 642.532 kb on + strand, within B158DRAFT_0634at 642.540 kb on - strand, within B158DRAFT_0634at 642.607 kb on - strand, within B158DRAFT_0634at 642.706 kb on + strandat 642.706 kb on + strandat 642.706 kb on + strandat 642.706 kb on + strandat 642.706 kb on + strandat 642.714 kb on - strandat 642.714 kb on - strandat 642.714 kb on - strandat 642.714 kb on - strandat 642.747 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM
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640,807 + B158DRAFT_0631 0.89 +0.4
640,817 + B158DRAFT_0631 0.90 +1.6
640,817 + B158DRAFT_0631 0.90 +1.3
640,825 + +0.5
640,825 + +0.0
640,825 - +0.8
640,833 - -0.3
640,833 - +0.7
640,858 + -0.2
641,010 - -0.6
641,020 + -1.8
641,020 + -0.2
641,062 + B158DRAFT_0632 0.14 -0.1
641,070 - B158DRAFT_0632 0.15 -1.2
641,105 + B158DRAFT_0632 0.20 +0.2
641,117 + B158DRAFT_0632 0.22 -0.5
641,134 + B158DRAFT_0632 0.24 -0.3
641,135 - B158DRAFT_0632 0.24 -0.7
641,135 - B158DRAFT_0632 0.24 -0.8
641,142 - B158DRAFT_0632 0.25 -0.1
641,184 - B158DRAFT_0632 0.31 +0.3
641,184 - B158DRAFT_0632 0.31 +0.3
641,285 + B158DRAFT_0632 0.46 -0.2
641,306 + B158DRAFT_0632 0.49 -0.4
641,316 - B158DRAFT_0632 0.51 -1.0
641,400 + B158DRAFT_0632 0.63 -0.1
641,408 - B158DRAFT_0632 0.64 +0.1
641,468 - B158DRAFT_0632 0.73 -0.2
641,511 - B158DRAFT_0632 0.79 +0.5
641,518 - B158DRAFT_0632 0.80 -1.1
641,535 + B158DRAFT_0632 0.82 -0.3
641,535 + B158DRAFT_0632 0.82 -0.7
641,535 + B158DRAFT_0632 0.82 -0.7
641,556 + B158DRAFT_0632 0.85 -0.9
641,635 - -0.2
641,680 + +0.4
641,688 - -0.1
641,688 - -0.4
641,761 - B158DRAFT_0633 0.18 -1.4
641,782 + B158DRAFT_0633 0.24 -0.4
641,790 - B158DRAFT_0633 0.26 -0.8
641,790 - B158DRAFT_0633 0.26 -0.3
641,809 + B158DRAFT_0633 0.32 -0.0
641,817 - B158DRAFT_0633 0.35 -0.3
641,854 - B158DRAFT_0633 0.46 -0.8
641,914 - B158DRAFT_0633 0.64 -0.2
641,946 + B158DRAFT_0633 0.74 -0.2
641,946 + B158DRAFT_0633 0.74 -0.1
641,946 + B158DRAFT_0633 0.74 -0.9
641,954 - B158DRAFT_0633 0.76 -0.1
641,985 + B158DRAFT_0633 0.85 -0.2
642,115 + -0.1
642,195 + B158DRAFT_0634 0.17 -0.5
642,195 + B158DRAFT_0634 0.17 -0.7
642,237 + B158DRAFT_0634 0.23 +0.0
642,245 + B158DRAFT_0634 0.25 -1.8
642,261 - B158DRAFT_0634 0.27 -0.4
642,290 + B158DRAFT_0634 0.32 -0.5
642,290 + B158DRAFT_0634 0.32 +0.9
642,310 + B158DRAFT_0634 0.35 +1.0
642,371 - B158DRAFT_0634 0.45 +0.3
642,427 + B158DRAFT_0634 0.54 +0.3
642,427 + B158DRAFT_0634 0.54 -0.9
642,427 + B158DRAFT_0634 0.54 -0.3
642,427 + B158DRAFT_0634 0.54 +1.8
642,427 + B158DRAFT_0634 0.54 -0.7
642,435 - B158DRAFT_0634 0.55 +0.4
642,435 - B158DRAFT_0634 0.55 +0.6
642,435 - B158DRAFT_0634 0.55 +0.6
642,435 - B158DRAFT_0634 0.55 -1.5
642,435 - B158DRAFT_0634 0.55 +0.1
642,435 - B158DRAFT_0634 0.55 -0.3
642,435 - B158DRAFT_0634 0.55 -0.2
642,440 - B158DRAFT_0634 0.56 -0.3
642,493 + B158DRAFT_0634 0.65 -0.3
642,493 + B158DRAFT_0634 0.65 +0.0
642,501 - B158DRAFT_0634 0.66 -0.3
642,521 + B158DRAFT_0634 0.69 -0.5
642,532 + B158DRAFT_0634 0.71 -0.1
642,540 - B158DRAFT_0634 0.72 -0.5
642,607 - B158DRAFT_0634 0.83 -0.1
642,706 + -0.5
642,706 + -0.7
642,706 + -1.2
642,706 + +0.8
642,706 + -0.2
642,714 - -0.6
642,714 - -0.6
642,714 - -0.9
642,714 - -0.8
642,747 - +0.8

Or see this region's nucleotide sequence