Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0609

Experiment: m.b. nitrate 200 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0608 and B158DRAFT_0609 are separated by 357 nucleotidesB158DRAFT_0609 and B158DRAFT_0610 are separated by 78 nucleotides B158DRAFT_0608: B158DRAFT_0608 - chaperone protein DnaK, at 613,286 to 615,217 _0608 B158DRAFT_0609: B158DRAFT_0609 - chaperone protein DnaJ, at 615,575 to 616,705 _0609 B158DRAFT_0610: B158DRAFT_0610 - 5-(carboxyamino)imidazole ribonucleotide synthase, at 616,784 to 617,935 _0610 Position (kb) 615 616 617Strain fitness (log2 ratio) -2 -1 0 1 2at 614.649 kb on + strand, within B158DRAFT_0608at 614.782 kb on + strand, within B158DRAFT_0608at 614.866 kb on - strand, within B158DRAFT_0608at 615.082 kb on + strandat 615.109 kb on + strandat 615.111 kb on - strandat 615.119 kb on + strandat 615.127 kb on + strandat 615.149 kb on + strandat 615.149 kb on + strandat 615.149 kb on + strandat 615.149 kb on + strandat 615.276 kb on + strandat 615.278 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.512 kb on + strandat 615.522 kb on + strandat 615.522 kb on + strandat 615.522 kb on + strandat 615.522 kb on + strandat 615.522 kb on + strandat 615.924 kb on + strand, within B158DRAFT_0609at 615.924 kb on + strand, within B158DRAFT_0609at 615.987 kb on - strand, within B158DRAFT_0609at 616.006 kb on + strand, within B158DRAFT_0609at 616.050 kb on - strand, within B158DRAFT_0609at 616.054 kb on - strand, within B158DRAFT_0609at 616.087 kb on - strand, within B158DRAFT_0609at 616.129 kb on - strand, within B158DRAFT_0609at 616.134 kb on - strand, within B158DRAFT_0609at 616.134 kb on - strand, within B158DRAFT_0609at 616.139 kb on - strand, within B158DRAFT_0609at 616.146 kb on + strand, within B158DRAFT_0609at 616.151 kb on + strand, within B158DRAFT_0609at 616.154 kb on - strand, within B158DRAFT_0609at 616.159 kb on - strand, within B158DRAFT_0609at 616.168 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.195 kb on - strand, within B158DRAFT_0609at 616.195 kb on - strand, within B158DRAFT_0609at 616.195 kb on - strand, within B158DRAFT_0609at 616.195 kb on - strand, within B158DRAFT_0609at 616.195 kb on - strand, within B158DRAFT_0609at 616.317 kb on + strand, within B158DRAFT_0609at 616.362 kb on + strand, within B158DRAFT_0609at 616.369 kb on + strand, within B158DRAFT_0609at 616.369 kb on + strand, within B158DRAFT_0609at 616.434 kb on + strand, within B158DRAFT_0609at 616.642 kb on - strandat 616.782 kb on + strandat 616.782 kb on + strandat 616.790 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM
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614,649 + B158DRAFT_0608 0.71 +2.7
614,782 + B158DRAFT_0608 0.77 +1.2
614,866 - B158DRAFT_0608 0.82 +1.7
615,082 + -0.3
615,109 + -1.1
615,111 - +2.0
615,119 + +0.9
615,127 + +1.0
615,149 + +0.6
615,149 + +0.4
615,149 + -0.6
615,149 + -1.4
615,276 + -0.2
615,278 + +0.4
615,476 + +0.3
615,476 + +0.2
615,476 + -0.1
615,476 + +1.7
615,476 + +0.6
615,476 + -0.6
615,476 + +0.3
615,476 + +0.1
615,476 + +0.0
615,476 + +0.5
615,476 + +2.0
615,512 + +0.4
615,522 + +0.3
615,522 + +1.1
615,522 + +0.4
615,522 + +0.3
615,522 + +0.7
615,924 + B158DRAFT_0609 0.31 -0.4
615,924 + B158DRAFT_0609 0.31 +0.6
615,987 - B158DRAFT_0609 0.36 +0.7
616,006 + B158DRAFT_0609 0.38 +0.5
616,050 - B158DRAFT_0609 0.42 +0.3
616,054 - B158DRAFT_0609 0.42 +1.4
616,087 - B158DRAFT_0609 0.45 +0.6
616,129 - B158DRAFT_0609 0.49 +0.6
616,134 - B158DRAFT_0609 0.49 +0.5
616,134 - B158DRAFT_0609 0.49 +0.0
616,139 - B158DRAFT_0609 0.50 +0.7
616,146 + B158DRAFT_0609 0.50 +0.8
616,151 + B158DRAFT_0609 0.51 +0.2
616,154 - B158DRAFT_0609 0.51 +0.5
616,159 - B158DRAFT_0609 0.52 +0.9
616,168 + B158DRAFT_0609 0.52 +0.6
616,187 + B158DRAFT_0609 0.54 +0.4
616,187 + B158DRAFT_0609 0.54 +1.5
616,187 + B158DRAFT_0609 0.54 -0.1
616,187 + B158DRAFT_0609 0.54 +0.4
616,187 + B158DRAFT_0609 0.54 +0.3
616,187 + B158DRAFT_0609 0.54 -0.7
616,195 - B158DRAFT_0609 0.55 +0.1
616,195 - B158DRAFT_0609 0.55 +0.1
616,195 - B158DRAFT_0609 0.55 +1.5
616,195 - B158DRAFT_0609 0.55 +0.9
616,195 - B158DRAFT_0609 0.55 +0.9
616,317 + B158DRAFT_0609 0.66 +0.5
616,362 + B158DRAFT_0609 0.70 +1.4
616,369 + B158DRAFT_0609 0.70 -0.1
616,369 + B158DRAFT_0609 0.70 +0.0
616,434 + B158DRAFT_0609 0.76 +0.3
616,642 - +0.3
616,782 + -0.5
616,782 + -1.9
616,790 - +0.1

Or see this region's nucleotide sequence