Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0322

Experiment: m.b. nitrate 200 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0320 and B158DRAFT_0321 are separated by 218 nucleotidesB158DRAFT_0321 and B158DRAFT_0322 are separated by 74 nucleotidesB158DRAFT_0322 and B158DRAFT_0323 are separated by 29 nucleotidesB158DRAFT_0323 and B158DRAFT_0324 are separated by 27 nucleotides B158DRAFT_0320: B158DRAFT_0320 - Superfamily II DNA and RNA helicases, at 324,985 to 326,289 _0320 B158DRAFT_0321: B158DRAFT_0321 - Uncharacterized conserved protein, at 326,508 to 326,984 _0321 B158DRAFT_0322: B158DRAFT_0322 - hypothetical protein, at 327,059 to 328,204 _0322 B158DRAFT_0323: B158DRAFT_0323 - Protocatechuate 3,4-dioxygenase beta subunit, at 328,234 to 328,830 _0323 B158DRAFT_0324: B158DRAFT_0324 - Cytochrome B561, at 328,858 to 329,445 _0324 Position (kb) 327 328 329Strain fitness (log2 ratio) -2 -1 0 1 2 3at 326.256 kb on - strandat 326.361 kb on + strandat 326.363 kb on - strandat 326.400 kb on - strandat 326.440 kb on + strandat 326.459 kb on + strandat 326.493 kb on - strandat 326.529 kb on - strandat 326.529 kb on - strandat 326.728 kb on + strand, within B158DRAFT_0321at 326.728 kb on + strand, within B158DRAFT_0321at 326.736 kb on - strand, within B158DRAFT_0321at 326.736 kb on - strand, within B158DRAFT_0321at 326.746 kb on - strand, within B158DRAFT_0321at 326.890 kb on - strand, within B158DRAFT_0321at 327.046 kb on + strandat 327.204 kb on + strand, within B158DRAFT_0322at 327.268 kb on - strand, within B158DRAFT_0322at 327.329 kb on + strand, within B158DRAFT_0322at 327.377 kb on - strand, within B158DRAFT_0322at 327.379 kb on + strand, within B158DRAFT_0322at 327.379 kb on + strand, within B158DRAFT_0322at 327.379 kb on + strand, within B158DRAFT_0322at 327.421 kb on - strand, within B158DRAFT_0322at 327.421 kb on - strand, within B158DRAFT_0322at 327.486 kb on - strand, within B158DRAFT_0322at 327.548 kb on + strand, within B158DRAFT_0322at 327.551 kb on - strand, within B158DRAFT_0322at 327.558 kb on - strand, within B158DRAFT_0322at 327.701 kb on - strand, within B158DRAFT_0322at 327.751 kb on + strand, within B158DRAFT_0322at 327.816 kb on + strand, within B158DRAFT_0322at 327.839 kb on - strand, within B158DRAFT_0322at 327.919 kb on - strand, within B158DRAFT_0322at 328.008 kb on - strand, within B158DRAFT_0322at 328.067 kb on + strand, within B158DRAFT_0322at 328.091 kb on - strandat 328.155 kb on - strandat 328.318 kb on - strand, within B158DRAFT_0323at 328.328 kb on - strand, within B158DRAFT_0323at 328.329 kb on + strand, within B158DRAFT_0323at 328.339 kb on - strand, within B158DRAFT_0323at 328.356 kb on + strand, within B158DRAFT_0323at 328.356 kb on + strand, within B158DRAFT_0323at 328.395 kb on + strand, within B158DRAFT_0323at 328.464 kb on - strand, within B158DRAFT_0323at 328.466 kb on + strand, within B158DRAFT_0323at 328.466 kb on + strand, within B158DRAFT_0323at 328.466 kb on + strand, within B158DRAFT_0323at 328.466 kb on + strand, within B158DRAFT_0323at 328.466 kb on + strand, within B158DRAFT_0323at 328.466 kb on + strand, within B158DRAFT_0323at 328.466 kb on + strand, within B158DRAFT_0323at 328.466 kb on + strand, within B158DRAFT_0323at 328.469 kb on - strand, within B158DRAFT_0323at 328.472 kb on + strand, within B158DRAFT_0323at 328.472 kb on + strand, within B158DRAFT_0323at 328.473 kb on - strand, within B158DRAFT_0323at 328.474 kb on - strand, within B158DRAFT_0323at 328.474 kb on - strand, within B158DRAFT_0323at 328.474 kb on - strand, within B158DRAFT_0323at 328.474 kb on - strand, within B158DRAFT_0323at 328.474 kb on - strand, within B158DRAFT_0323at 328.474 kb on - strand, within B158DRAFT_0323at 328.474 kb on - strand, within B158DRAFT_0323at 328.478 kb on + strand, within B158DRAFT_0323at 328.479 kb on + strand, within B158DRAFT_0323at 328.480 kb on - strand, within B158DRAFT_0323at 328.516 kb on - strand, within B158DRAFT_0323at 328.529 kb on - strand, within B158DRAFT_0323at 328.540 kb on + strand, within B158DRAFT_0323at 328.548 kb on - strand, within B158DRAFT_0323at 328.557 kb on - strand, within B158DRAFT_0323at 328.599 kb on - strand, within B158DRAFT_0323at 328.662 kb on + strand, within B158DRAFT_0323at 328.738 kb on + strand, within B158DRAFT_0323at 328.746 kb on - strand, within B158DRAFT_0323at 328.746 kb on - strand, within B158DRAFT_0323at 328.746 kb on - strand, within B158DRAFT_0323at 328.746 kb on - strand, within B158DRAFT_0323at 328.820 kb on + strandat 328.963 kb on + strand, within B158DRAFT_0324at 328.973 kb on - strand, within B158DRAFT_0324at 329.007 kb on + strand, within B158DRAFT_0324at 329.007 kb on + strand, within B158DRAFT_0324at 329.029 kb on - strand, within B158DRAFT_0324at 329.116 kb on + strand, within B158DRAFT_0324at 329.125 kb on + strand, within B158DRAFT_0324at 329.164 kb on + strand, within B158DRAFT_0324at 329.197 kb on + strand, within B158DRAFT_0324

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM
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326,256 - -0.8
326,361 + +1.4
326,363 - +0.2
326,400 - -0.2
326,440 + +0.1
326,459 + +0.6
326,493 - +0.3
326,529 - +0.1
326,529 - -0.2
326,728 + B158DRAFT_0321 0.46 +0.0
326,728 + B158DRAFT_0321 0.46 -0.5
326,736 - B158DRAFT_0321 0.48 +0.2
326,736 - B158DRAFT_0321 0.48 +0.4
326,746 - B158DRAFT_0321 0.50 -2.3
326,890 - B158DRAFT_0321 0.80 -0.5
327,046 + +0.6
327,204 + B158DRAFT_0322 0.13 -0.3
327,268 - B158DRAFT_0322 0.18 +0.4
327,329 + B158DRAFT_0322 0.24 +0.5
327,377 - B158DRAFT_0322 0.28 +0.4
327,379 + B158DRAFT_0322 0.28 +0.3
327,379 + B158DRAFT_0322 0.28 -0.8
327,379 + B158DRAFT_0322 0.28 +0.2
327,421 - B158DRAFT_0322 0.32 -0.6
327,421 - B158DRAFT_0322 0.32 +0.6
327,486 - B158DRAFT_0322 0.37 -0.1
327,548 + B158DRAFT_0322 0.43 -0.1
327,551 - B158DRAFT_0322 0.43 +0.1
327,558 - B158DRAFT_0322 0.44 -0.4
327,701 - B158DRAFT_0322 0.56 +0.4
327,751 + B158DRAFT_0322 0.60 +0.0
327,816 + B158DRAFT_0322 0.66 -0.2
327,839 - B158DRAFT_0322 0.68 +1.1
327,919 - B158DRAFT_0322 0.75 -0.7
328,008 - B158DRAFT_0322 0.83 +0.6
328,067 + B158DRAFT_0322 0.88 -0.3
328,091 - +0.4
328,155 - -0.3
328,318 - B158DRAFT_0323 0.14 +0.4
328,328 - B158DRAFT_0323 0.16 +0.2
328,329 + B158DRAFT_0323 0.16 -0.2
328,339 - B158DRAFT_0323 0.18 +0.4
328,356 + B158DRAFT_0323 0.20 +0.3
328,356 + B158DRAFT_0323 0.20 +0.2
328,395 + B158DRAFT_0323 0.27 +0.9
328,464 - B158DRAFT_0323 0.39 -0.1
328,466 + B158DRAFT_0323 0.39 +0.2
328,466 + B158DRAFT_0323 0.39 +0.1
328,466 + B158DRAFT_0323 0.39 -0.9
328,466 + B158DRAFT_0323 0.39 -0.2
328,466 + B158DRAFT_0323 0.39 -0.1
328,466 + B158DRAFT_0323 0.39 -0.1
328,466 + B158DRAFT_0323 0.39 -0.7
328,466 + B158DRAFT_0323 0.39 -1.0
328,469 - B158DRAFT_0323 0.39 -0.0
328,472 + B158DRAFT_0323 0.40 +0.0
328,472 + B158DRAFT_0323 0.40 -1.2
328,473 - B158DRAFT_0323 0.40 -1.5
328,474 - B158DRAFT_0323 0.40 +2.9
328,474 - B158DRAFT_0323 0.40 -0.5
328,474 - B158DRAFT_0323 0.40 +0.4
328,474 - B158DRAFT_0323 0.40 +0.5
328,474 - B158DRAFT_0323 0.40 -0.1
328,474 - B158DRAFT_0323 0.40 +0.1
328,474 - B158DRAFT_0323 0.40 -1.0
328,478 + B158DRAFT_0323 0.41 -0.3
328,479 + B158DRAFT_0323 0.41 -0.8
328,480 - B158DRAFT_0323 0.41 -0.3
328,516 - B158DRAFT_0323 0.47 -0.9
328,529 - B158DRAFT_0323 0.49 -0.4
328,540 + B158DRAFT_0323 0.51 -0.0
328,548 - B158DRAFT_0323 0.53 +0.2
328,557 - B158DRAFT_0323 0.54 +0.1
328,599 - B158DRAFT_0323 0.61 -0.5
328,662 + B158DRAFT_0323 0.72 -0.0
328,738 + B158DRAFT_0323 0.84 -0.3
328,746 - B158DRAFT_0323 0.86 -0.3
328,746 - B158DRAFT_0323 0.86 +0.5
328,746 - B158DRAFT_0323 0.86 +0.1
328,746 - B158DRAFT_0323 0.86 -0.4
328,820 + -0.5
328,963 + B158DRAFT_0324 0.18 -0.4
328,973 - B158DRAFT_0324 0.20 -0.5
329,007 + B158DRAFT_0324 0.25 +0.4
329,007 + B158DRAFT_0324 0.25 -0.3
329,029 - B158DRAFT_0324 0.29 +0.2
329,116 + B158DRAFT_0324 0.44 -1.1
329,125 + B158DRAFT_0324 0.45 -0.4
329,164 + B158DRAFT_0324 0.52 -0.1
329,197 + B158DRAFT_0324 0.58 +0.7

Or see this region's nucleotide sequence