Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0277

Experiment: m.b. nitrate 200 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0274 and B158DRAFT_0276 are separated by 313 nucleotidesB158DRAFT_0276 and B158DRAFT_0277 are separated by 62 nucleotidesB158DRAFT_0277 and B158DRAFT_0278 are separated by 142 nucleotidesB158DRAFT_0278 and B158DRAFT_0279 are separated by 137 nucleotides B158DRAFT_0274: B158DRAFT_0274 - 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.39), at 281,247 to 282,107 _0274 B158DRAFT_0276: B158DRAFT_0276 - chorismate lyase (EC 4.1.3.40), at 282,421 to 282,978 _0276 B158DRAFT_0277: B158DRAFT_0277 - Transcriptional regulator, at 283,041 to 283,943 _0277 B158DRAFT_0278: B158DRAFT_0278 - peroxiredoxin, at 284,086 to 284,649 _0278 B158DRAFT_0279: B158DRAFT_0279 - alkyl hydroperoxide reductase, F subunit, at 284,787 to 286,397 _0279 Position (kb) 283 284Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 282.181 kb on - strandat 282.182 kb on - strandat 282.435 kb on - strandat 282.517 kb on - strand, within B158DRAFT_0276at 282.590 kb on - strand, within B158DRAFT_0276at 282.610 kb on - strand, within B158DRAFT_0276at 282.663 kb on - strand, within B158DRAFT_0276at 282.780 kb on - strand, within B158DRAFT_0276at 282.780 kb on - strand, within B158DRAFT_0276at 282.848 kb on + strand, within B158DRAFT_0276at 282.856 kb on - strand, within B158DRAFT_0276at 282.856 kb on - strand, within B158DRAFT_0276at 282.954 kb on + strandat 282.988 kb on + strandat 283.033 kb on + strandat 283.051 kb on + strandat 283.061 kb on + strandat 283.061 kb on + strandat 283.066 kb on + strandat 283.069 kb on - strandat 283.074 kb on - strandat 283.104 kb on - strandat 283.104 kb on - strandat 283.115 kb on - strandat 283.266 kb on + strand, within B158DRAFT_0277at 283.337 kb on + strand, within B158DRAFT_0277at 283.345 kb on - strand, within B158DRAFT_0277at 283.354 kb on + strand, within B158DRAFT_0277at 283.362 kb on - strand, within B158DRAFT_0277at 283.433 kb on + strand, within B158DRAFT_0277at 283.441 kb on - strand, within B158DRAFT_0277at 283.473 kb on + strand, within B158DRAFT_0277at 283.518 kb on - strand, within B158DRAFT_0277at 283.536 kb on - strand, within B158DRAFT_0277at 283.536 kb on - strand, within B158DRAFT_0277at 283.641 kb on + strand, within B158DRAFT_0277at 283.641 kb on - strand, within B158DRAFT_0277at 283.641 kb on - strand, within B158DRAFT_0277at 283.642 kb on - strand, within B158DRAFT_0277at 283.649 kb on - strand, within B158DRAFT_0277at 283.672 kb on - strand, within B158DRAFT_0277at 283.672 kb on - strand, within B158DRAFT_0277at 283.689 kb on - strand, within B158DRAFT_0277at 283.719 kb on - strand, within B158DRAFT_0277at 283.719 kb on - strand, within B158DRAFT_0277at 283.733 kb on + strand, within B158DRAFT_0277at 283.741 kb on - strand, within B158DRAFT_0277at 283.743 kb on + strand, within B158DRAFT_0277at 283.751 kb on - strand, within B158DRAFT_0277at 283.773 kb on - strand, within B158DRAFT_0277at 283.773 kb on - strand, within B158DRAFT_0277at 283.773 kb on - strand, within B158DRAFT_0277at 283.778 kb on - strand, within B158DRAFT_0277at 283.808 kb on - strand, within B158DRAFT_0277at 283.850 kb on - strand, within B158DRAFT_0277at 283.850 kb on - strand, within B158DRAFT_0277at 283.914 kb on + strandat 283.914 kb on - strandat 284.029 kb on - strandat 284.034 kb on - strandat 284.100 kb on - strandat 284.114 kb on - strandat 284.123 kb on - strandat 284.228 kb on + strand, within B158DRAFT_0278at 284.233 kb on - strand, within B158DRAFT_0278at 284.266 kb on + strand, within B158DRAFT_0278at 284.274 kb on - strand, within B158DRAFT_0278at 284.274 kb on - strand, within B158DRAFT_0278at 284.274 kb on - strand, within B158DRAFT_0278at 284.274 kb on - strand, within B158DRAFT_0278at 284.284 kb on + strand, within B158DRAFT_0278at 284.332 kb on - strand, within B158DRAFT_0278at 284.357 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.425 kb on + strand, within B158DRAFT_0278at 284.432 kb on + strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.433 kb on - strand, within B158DRAFT_0278at 284.440 kb on - strand, within B158DRAFT_0278at 284.440 kb on - strand, within B158DRAFT_0278at 284.440 kb on - strand, within B158DRAFT_0278at 284.447 kb on + strand, within B158DRAFT_0278at 284.471 kb on + strand, within B158DRAFT_0278at 284.471 kb on + strand, within B158DRAFT_0278at 284.503 kb on + strand, within B158DRAFT_0278at 284.503 kb on + strand, within B158DRAFT_0278at 284.503 kb on + strand, within B158DRAFT_0278at 284.503 kb on + strand, within B158DRAFT_0278at 284.503 kb on + strand, within B158DRAFT_0278at 284.511 kb on - strand, within B158DRAFT_0278at 284.511 kb on - strand, within B158DRAFT_0278at 284.511 kb on - strand, within B158DRAFT_0278at 284.511 kb on - strand, within B158DRAFT_0278at 284.511 kb on - strand, within B158DRAFT_0278at 284.511 kb on - strand, within B158DRAFT_0278at 284.518 kb on + strand, within B158DRAFT_0278at 284.570 kb on - strand, within B158DRAFT_0278at 284.652 kb on - strandat 284.686 kb on - strandat 284.702 kb on + strandat 284.768 kb on + strandat 284.768 kb on + strandat 284.783 kb on - strandat 284.819 kb on + strandat 284.819 kb on + strandat 284.819 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM
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282,181 - -0.2
282,182 - -0.6
282,435 - -0.1
282,517 - B158DRAFT_0276 0.17 +0.9
282,590 - B158DRAFT_0276 0.30 +0.6
282,610 - B158DRAFT_0276 0.34 +1.8
282,663 - B158DRAFT_0276 0.43 -0.1
282,780 - B158DRAFT_0276 0.64 +0.8
282,780 - B158DRAFT_0276 0.64 +1.3
282,848 + B158DRAFT_0276 0.77 +2.5
282,856 - B158DRAFT_0276 0.78 +1.4
282,856 - B158DRAFT_0276 0.78 +0.3
282,954 + +4.9
282,988 + +5.7
283,033 + -0.5
283,051 + -0.3
283,061 + -0.7
283,061 + -1.9
283,066 + -0.2
283,069 - -0.1
283,074 - -0.1
283,104 - -0.2
283,104 - +0.6
283,115 - +2.1
283,266 + B158DRAFT_0277 0.25 +0.7
283,337 + B158DRAFT_0277 0.33 -1.3
283,345 - B158DRAFT_0277 0.34 -1.4
283,354 + B158DRAFT_0277 0.35 +0.6
283,362 - B158DRAFT_0277 0.36 -1.1
283,433 + B158DRAFT_0277 0.43 +1.9
283,441 - B158DRAFT_0277 0.44 +0.2
283,473 + B158DRAFT_0277 0.48 +0.4
283,518 - B158DRAFT_0277 0.53 +0.1
283,536 - B158DRAFT_0277 0.55 +0.6
283,536 - B158DRAFT_0277 0.55 -0.5
283,641 + B158DRAFT_0277 0.66 -0.7
283,641 - B158DRAFT_0277 0.66 -0.8
283,641 - B158DRAFT_0277 0.66 -0.9
283,642 - B158DRAFT_0277 0.67 -0.0
283,649 - B158DRAFT_0277 0.67 -0.3
283,672 - B158DRAFT_0277 0.70 -0.6
283,672 - B158DRAFT_0277 0.70 -1.0
283,689 - B158DRAFT_0277 0.72 -0.2
283,719 - B158DRAFT_0277 0.75 -0.8
283,719 - B158DRAFT_0277 0.75 +0.9
283,733 + B158DRAFT_0277 0.77 +0.0
283,741 - B158DRAFT_0277 0.78 -0.2
283,743 + B158DRAFT_0277 0.78 -1.3
283,751 - B158DRAFT_0277 0.79 -0.2
283,773 - B158DRAFT_0277 0.81 -0.4
283,773 - B158DRAFT_0277 0.81 +0.1
283,773 - B158DRAFT_0277 0.81 -0.1
283,778 - B158DRAFT_0277 0.82 +0.0
283,808 - B158DRAFT_0277 0.85 -0.4
283,850 - B158DRAFT_0277 0.90 -0.1
283,850 - B158DRAFT_0277 0.90 -1.3
283,914 + -0.2
283,914 - +0.2
284,029 - -0.2
284,034 - -0.2
284,100 - -0.6
284,114 - -0.4
284,123 - -0.4
284,228 + B158DRAFT_0278 0.25 +0.5
284,233 - B158DRAFT_0278 0.26 -0.4
284,266 + B158DRAFT_0278 0.32 +0.1
284,274 - B158DRAFT_0278 0.33 +0.0
284,274 - B158DRAFT_0278 0.33 -0.9
284,274 - B158DRAFT_0278 0.33 -0.7
284,274 - B158DRAFT_0278 0.33 -0.1
284,284 + B158DRAFT_0278 0.35 -0.4
284,332 - B158DRAFT_0278 0.44 -0.4
284,357 + B158DRAFT_0278 0.48 -0.8
284,425 + B158DRAFT_0278 0.60 +0.1
284,425 + B158DRAFT_0278 0.60 -0.4
284,425 + B158DRAFT_0278 0.60 +0.1
284,425 + B158DRAFT_0278 0.60 +0.4
284,425 + B158DRAFT_0278 0.60 +0.3
284,425 + B158DRAFT_0278 0.60 -0.2
284,425 + B158DRAFT_0278 0.60 -1.2
284,425 + B158DRAFT_0278 0.60 +0.1
284,425 + B158DRAFT_0278 0.60 -0.4
284,425 + B158DRAFT_0278 0.60 +1.9
284,425 + B158DRAFT_0278 0.60 -0.4
284,425 + B158DRAFT_0278 0.60 -0.2
284,425 + B158DRAFT_0278 0.60 +0.1
284,425 + B158DRAFT_0278 0.60 +0.3
284,425 + B158DRAFT_0278 0.60 +0.1
284,425 + B158DRAFT_0278 0.60 -0.7
284,425 + B158DRAFT_0278 0.60 +0.5
284,425 + B158DRAFT_0278 0.60 -0.6
284,425 + B158DRAFT_0278 0.60 -1.3
284,425 + B158DRAFT_0278 0.60 -0.8
284,425 + B158DRAFT_0278 0.60 +0.7
284,425 + B158DRAFT_0278 0.60 -0.4
284,425 + B158DRAFT_0278 0.60 +0.3
284,425 + B158DRAFT_0278 0.60 +0.6
284,425 + B158DRAFT_0278 0.60 +0.2
284,425 + B158DRAFT_0278 0.60 -0.1
284,425 + B158DRAFT_0278 0.60 -2.1
284,425 + B158DRAFT_0278 0.60 +0.4
284,425 + B158DRAFT_0278 0.60 +0.7
284,425 + B158DRAFT_0278 0.60 -0.1
284,432 + B158DRAFT_0278 0.61 -0.3
284,433 - B158DRAFT_0278 0.62 -0.6
284,433 - B158DRAFT_0278 0.62 -0.2
284,433 - B158DRAFT_0278 0.62 -1.9
284,433 - B158DRAFT_0278 0.62 -1.6
284,433 - B158DRAFT_0278 0.62 -0.3
284,433 - B158DRAFT_0278 0.62 -0.7
284,433 - B158DRAFT_0278 0.62 -0.4
284,433 - B158DRAFT_0278 0.62 -0.7
284,433 - B158DRAFT_0278 0.62 -0.3
284,433 - B158DRAFT_0278 0.62 -0.6
284,433 - B158DRAFT_0278 0.62 -0.6
284,433 - B158DRAFT_0278 0.62 -0.1
284,433 - B158DRAFT_0278 0.62 -0.7
284,433 - B158DRAFT_0278 0.62 -0.1
284,433 - B158DRAFT_0278 0.62 +0.1
284,433 - B158DRAFT_0278 0.62 -0.4
284,433 - B158DRAFT_0278 0.62 -0.8
284,440 - B158DRAFT_0278 0.63 -0.3
284,440 - B158DRAFT_0278 0.63 -1.8
284,440 - B158DRAFT_0278 0.63 -0.1
284,447 + B158DRAFT_0278 0.64 -0.1
284,471 + B158DRAFT_0278 0.68 -1.0
284,471 + B158DRAFT_0278 0.68 +1.3
284,503 + B158DRAFT_0278 0.74 -0.4
284,503 + B158DRAFT_0278 0.74 -0.6
284,503 + B158DRAFT_0278 0.74 -0.6
284,503 + B158DRAFT_0278 0.74 -0.3
284,503 + B158DRAFT_0278 0.74 +0.6
284,511 - B158DRAFT_0278 0.75 -2.1
284,511 - B158DRAFT_0278 0.75 -1.1
284,511 - B158DRAFT_0278 0.75 +0.9
284,511 - B158DRAFT_0278 0.75 -0.6
284,511 - B158DRAFT_0278 0.75 -0.2
284,511 - B158DRAFT_0278 0.75 -0.1
284,518 + B158DRAFT_0278 0.77 -1.2
284,570 - B158DRAFT_0278 0.86 -0.3
284,652 - -0.0
284,686 - -0.5
284,702 + -0.2
284,768 + +0.2
284,768 + -0.4
284,783 - -0.3
284,819 + -0.3
284,819 + -2.1
284,819 - -1.1

Or see this region's nucleotide sequence