Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2457

Experiment: m.b. nitrate 400 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2456 and B158DRAFT_2457 are separated by 66 nucleotidesB158DRAFT_2457 and B158DRAFT_2458 are separated by 170 nucleotides B158DRAFT_2456: B158DRAFT_2456 - cysteine synthase A, at 631,692 to 632,639 _2456 B158DRAFT_2457: B158DRAFT_2457 - methionine repressor, MetJ, at 632,706 to 633,002 _2457 B158DRAFT_2458: B158DRAFT_2458 - Homoserine acetyltransferase, at 633,173 to 634,192 _2458 Position (kb) 632 633 634Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 631.821 kb on + strand, within B158DRAFT_2456at 631.829 kb on - strand, within B158DRAFT_2456at 631.829 kb on - strand, within B158DRAFT_2456at 631.859 kb on - strand, within B158DRAFT_2456at 631.882 kb on + strand, within B158DRAFT_2456at 631.892 kb on + strand, within B158DRAFT_2456at 631.915 kb on - strand, within B158DRAFT_2456at 631.923 kb on + strand, within B158DRAFT_2456at 631.928 kb on + strand, within B158DRAFT_2456at 631.931 kb on - strand, within B158DRAFT_2456at 631.931 kb on - strand, within B158DRAFT_2456at 631.931 kb on - strand, within B158DRAFT_2456at 631.936 kb on - strand, within B158DRAFT_2456at 632.038 kb on - strand, within B158DRAFT_2456at 632.134 kb on - strand, within B158DRAFT_2456at 632.147 kb on + strand, within B158DRAFT_2456at 632.150 kb on + strand, within B158DRAFT_2456at 632.319 kb on + strand, within B158DRAFT_2456at 632.319 kb on + strand, within B158DRAFT_2456at 632.319 kb on + strand, within B158DRAFT_2456at 632.439 kb on + strand, within B158DRAFT_2456at 632.439 kb on + strand, within B158DRAFT_2456at 632.447 kb on - strand, within B158DRAFT_2456at 632.495 kb on - strand, within B158DRAFT_2456at 632.506 kb on + strand, within B158DRAFT_2456at 632.532 kb on - strand, within B158DRAFT_2456at 632.584 kb on + strandat 632.693 kb on - strandat 632.753 kb on - strand, within B158DRAFT_2457at 632.800 kb on + strand, within B158DRAFT_2457at 632.800 kb on + strand, within B158DRAFT_2457at 632.808 kb on - strand, within B158DRAFT_2457at 633.014 kb on - strandat 633.051 kb on + strandat 633.137 kb on + strandat 633.137 kb on + strandat 633.137 kb on + strandat 633.137 kb on + strandat 633.137 kb on + strandat 633.137 kb on + strandat 633.139 kb on - strandat 633.145 kb on - strandat 633.145 kb on - strandat 633.145 kb on - strandat 633.145 kb on - strandat 633.145 kb on - strandat 633.200 kb on + strandat 633.200 kb on + strandat 633.215 kb on - strandat 633.216 kb on - strandat 633.227 kb on + strandat 633.235 kb on - strandat 633.235 kb on - strandat 633.240 kb on + strandat 633.240 kb on + strandat 633.240 kb on + strandat 633.250 kb on + strandat 633.266 kb on - strandat 633.285 kb on - strand, within B158DRAFT_2458at 633.317 kb on - strand, within B158DRAFT_2458at 633.317 kb on - strand, within B158DRAFT_2458at 633.317 kb on - strand, within B158DRAFT_2458at 633.351 kb on + strand, within B158DRAFT_2458at 633.358 kb on + strand, within B158DRAFT_2458at 633.481 kb on + strand, within B158DRAFT_2458at 633.538 kb on + strand, within B158DRAFT_2458at 633.538 kb on + strand, within B158DRAFT_2458at 633.538 kb on + strand, within B158DRAFT_2458at 633.541 kb on - strand, within B158DRAFT_2458at 633.546 kb on - strand, within B158DRAFT_2458at 633.546 kb on - strand, within B158DRAFT_2458at 633.546 kb on - strand, within B158DRAFT_2458at 633.672 kb on + strand, within B158DRAFT_2458at 633.688 kb on + strand, within B158DRAFT_2458at 633.700 kb on + strand, within B158DRAFT_2458at 633.797 kb on + strand, within B158DRAFT_2458at 633.951 kb on + strand, within B158DRAFT_2458at 633.959 kb on - strand, within B158DRAFT_2458

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrate 400 mM
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631,821 + B158DRAFT_2456 0.14 +0.8
631,829 - B158DRAFT_2456 0.14 +0.4
631,829 - B158DRAFT_2456 0.14 +0.2
631,859 - B158DRAFT_2456 0.18 -1.2
631,882 + B158DRAFT_2456 0.20 -0.2
631,892 + B158DRAFT_2456 0.21 -0.1
631,915 - B158DRAFT_2456 0.24 +0.4
631,923 + B158DRAFT_2456 0.24 -0.4
631,928 + B158DRAFT_2456 0.25 +0.9
631,931 - B158DRAFT_2456 0.25 -0.2
631,931 - B158DRAFT_2456 0.25 -0.2
631,931 - B158DRAFT_2456 0.25 +1.1
631,936 - B158DRAFT_2456 0.26 -0.1
632,038 - B158DRAFT_2456 0.36 +0.1
632,134 - B158DRAFT_2456 0.47 -0.6
632,147 + B158DRAFT_2456 0.48 +0.3
632,150 + B158DRAFT_2456 0.48 +0.4
632,319 + B158DRAFT_2456 0.66 -0.2
632,319 + B158DRAFT_2456 0.66 +0.1
632,319 + B158DRAFT_2456 0.66 +0.3
632,439 + B158DRAFT_2456 0.79 -0.2
632,439 + B158DRAFT_2456 0.79 +0.2
632,447 - B158DRAFT_2456 0.80 -0.3
632,495 - B158DRAFT_2456 0.85 -0.3
632,506 + B158DRAFT_2456 0.86 +0.2
632,532 - B158DRAFT_2456 0.89 +0.9
632,584 + -0.6
632,693 - +0.6
632,753 - B158DRAFT_2457 0.16 +2.9
632,800 + B158DRAFT_2457 0.32 +2.0
632,800 + B158DRAFT_2457 0.32 +2.2
632,808 - B158DRAFT_2457 0.34 +1.1
633,014 - +2.0
633,051 + +0.4
633,137 + +1.5
633,137 + +0.9
633,137 + -0.0
633,137 + -0.7
633,137 + -1.3
633,137 + +0.4
633,139 - -0.6
633,145 - +0.4
633,145 - -0.3
633,145 - -0.6
633,145 - -0.1
633,145 - -0.3
633,200 + -0.4
633,200 + +0.2
633,215 - +0.1
633,216 - -0.4
633,227 + -0.4
633,235 - -0.2
633,235 - -0.3
633,240 + -0.0
633,240 + -0.3
633,240 + +0.4
633,250 + -0.2
633,266 - -0.3
633,285 - B158DRAFT_2458 0.11 +0.5
633,317 - B158DRAFT_2458 0.14 +0.0
633,317 - B158DRAFT_2458 0.14 -0.9
633,317 - B158DRAFT_2458 0.14 +0.3
633,351 + B158DRAFT_2458 0.17 -0.0
633,358 + B158DRAFT_2458 0.18 +0.4
633,481 + B158DRAFT_2458 0.30 -0.5
633,538 + B158DRAFT_2458 0.36 -0.4
633,538 + B158DRAFT_2458 0.36 +0.0
633,538 + B158DRAFT_2458 0.36 +1.6
633,541 - B158DRAFT_2458 0.36 -0.6
633,546 - B158DRAFT_2458 0.37 -0.2
633,546 - B158DRAFT_2458 0.37 -0.5
633,546 - B158DRAFT_2458 0.37 -3.2
633,672 + B158DRAFT_2458 0.49 -1.0
633,688 + B158DRAFT_2458 0.50 -0.2
633,700 + B158DRAFT_2458 0.52 +0.5
633,797 + B158DRAFT_2458 0.61 -0.3
633,951 + B158DRAFT_2458 0.76 -0.2
633,959 - B158DRAFT_2458 0.77 -2.9

Or see this region's nucleotide sequence