Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2366

Experiment: m.b. nitrate 400 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2365 and B158DRAFT_2366 overlap by 8 nucleotidesB158DRAFT_2366 and B158DRAFT_2367 overlap by 8 nucleotidesB158DRAFT_2367 and B158DRAFT_2368 overlap by 11 nucleotides B158DRAFT_2365: B158DRAFT_2365 - DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)/endonuclease III (EC 3.2.2.-), at 537,118 to 537,753 _2365 B158DRAFT_2366: B158DRAFT_2366 - electron transport complex, RnfABCDGE type, E subunit, at 537,746 to 538,447 _2366 B158DRAFT_2367: B158DRAFT_2367 - electron transport complex, RnfABCDGE type, G subunit, at 538,440 to 539,081 _2367 B158DRAFT_2368: B158DRAFT_2368 - electron transport complex, RnfABCDGE type, D subunit, at 539,071 to 540,147 _2368 Position (kb) 537 538 539Strain fitness (log2 ratio) -3 -2 -1 0 1at 536.785 kb on - strandat 536.832 kb on - strandat 536.884 kb on - strandat 536.884 kb on - strandat 536.921 kb on + strandat 536.982 kb on - strandat 536.982 kb on - strandat 536.984 kb on + strandat 537.218 kb on + strand, within B158DRAFT_2365at 537.221 kb on - strand, within B158DRAFT_2365at 537.226 kb on - strand, within B158DRAFT_2365at 537.259 kb on + strand, within B158DRAFT_2365at 537.373 kb on + strand, within B158DRAFT_2365at 537.373 kb on + strand, within B158DRAFT_2365at 537.373 kb on + strand, within B158DRAFT_2365at 537.379 kb on - strand, within B158DRAFT_2365at 537.379 kb on - strand, within B158DRAFT_2365at 537.412 kb on - strand, within B158DRAFT_2365at 537.416 kb on + strand, within B158DRAFT_2365at 537.416 kb on + strand, within B158DRAFT_2365at 537.417 kb on - strand, within B158DRAFT_2365at 537.424 kb on - strand, within B158DRAFT_2365at 537.444 kb on + strand, within B158DRAFT_2365at 537.452 kb on - strand, within B158DRAFT_2365at 537.503 kb on + strand, within B158DRAFT_2365at 537.503 kb on + strand, within B158DRAFT_2365at 537.511 kb on - strand, within B158DRAFT_2365at 537.511 kb on - strand, within B158DRAFT_2365at 537.511 kb on - strand, within B158DRAFT_2365at 537.511 kb on - strand, within B158DRAFT_2365at 537.513 kb on + strand, within B158DRAFT_2365at 537.542 kb on - strand, within B158DRAFT_2365at 537.563 kb on - strand, within B158DRAFT_2365at 537.564 kb on - strand, within B158DRAFT_2365at 537.564 kb on - strand, within B158DRAFT_2365at 537.575 kb on + strand, within B158DRAFT_2365at 537.583 kb on - strand, within B158DRAFT_2365at 537.605 kb on + strand, within B158DRAFT_2365at 537.605 kb on + strand, within B158DRAFT_2365at 537.653 kb on + strand, within B158DRAFT_2365at 537.692 kb on - strandat 537.755 kb on + strandat 537.803 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrate 400 mM
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536,785 - +0.7
536,832 - -0.6
536,884 - -1.4
536,884 - +0.1
536,921 + -0.5
536,982 - -0.5
536,982 - -0.2
536,984 + -0.2
537,218 + B158DRAFT_2365 0.16 +0.3
537,221 - B158DRAFT_2365 0.16 +0.1
537,226 - B158DRAFT_2365 0.17 -0.4
537,259 + B158DRAFT_2365 0.22 -0.5
537,373 + B158DRAFT_2365 0.40 -0.3
537,373 + B158DRAFT_2365 0.40 -0.0
537,373 + B158DRAFT_2365 0.40 -0.4
537,379 - B158DRAFT_2365 0.41 +0.8
537,379 - B158DRAFT_2365 0.41 +0.1
537,412 - B158DRAFT_2365 0.46 -0.8
537,416 + B158DRAFT_2365 0.47 +0.5
537,416 + B158DRAFT_2365 0.47 +0.5
537,417 - B158DRAFT_2365 0.47 +0.5
537,424 - B158DRAFT_2365 0.48 +0.5
537,444 + B158DRAFT_2365 0.51 -0.6
537,452 - B158DRAFT_2365 0.53 +0.0
537,503 + B158DRAFT_2365 0.61 +0.0
537,503 + B158DRAFT_2365 0.61 -0.2
537,511 - B158DRAFT_2365 0.62 -0.0
537,511 - B158DRAFT_2365 0.62 -0.1
537,511 - B158DRAFT_2365 0.62 +0.1
537,511 - B158DRAFT_2365 0.62 -0.4
537,513 + B158DRAFT_2365 0.62 +0.2
537,542 - B158DRAFT_2365 0.67 +0.6
537,563 - B158DRAFT_2365 0.70 -0.3
537,564 - B158DRAFT_2365 0.70 -0.5
537,564 - B158DRAFT_2365 0.70 +0.1
537,575 + B158DRAFT_2365 0.72 -1.6
537,583 - B158DRAFT_2365 0.73 -3.4
537,605 + B158DRAFT_2365 0.77 -0.8
537,605 + B158DRAFT_2365 0.77 -0.3
537,653 + B158DRAFT_2365 0.84 -1.8
537,692 - -0.1
537,755 + +0.1
537,803 - -0.3

Or see this region's nucleotide sequence