Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1807

Experiment: m.b. nitrate 400 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1806 and B158DRAFT_1807 are separated by 82 nucleotidesB158DRAFT_1807 and B158DRAFT_1808 are separated by 322 nucleotides B158DRAFT_1806: B158DRAFT_1806 - Glutamate dehydrogenase/leucine dehydrogenase, at 1,904,943 to 1,905,980 _1806 B158DRAFT_1807: B158DRAFT_1807 - hypothetical protein, at 1,906,063 to 1,907,289 _1807 B158DRAFT_1808: B158DRAFT_1808 - Predicted permease, DMT superfamily, at 1,907,612 to 1,908,484 _1808 Position (kb) 1906 1907 1908Strain fitness (log2 ratio) -1 0 1at 1906.068 kb on - strandat 1906.106 kb on - strandat 1906.124 kb on - strandat 1906.189 kb on + strand, within B158DRAFT_1807at 1906.213 kb on - strand, within B158DRAFT_1807at 1906.359 kb on + strand, within B158DRAFT_1807at 1906.359 kb on + strand, within B158DRAFT_1807at 1906.369 kb on - strand, within B158DRAFT_1807at 1906.398 kb on - strand, within B158DRAFT_1807at 1906.505 kb on + strand, within B158DRAFT_1807at 1906.505 kb on + strand, within B158DRAFT_1807at 1906.513 kb on - strand, within B158DRAFT_1807at 1906.515 kb on + strand, within B158DRAFT_1807at 1906.581 kb on + strand, within B158DRAFT_1807at 1906.589 kb on + strand, within B158DRAFT_1807at 1906.597 kb on - strand, within B158DRAFT_1807at 1906.652 kb on - strand, within B158DRAFT_1807at 1906.835 kb on + strand, within B158DRAFT_1807at 1906.865 kb on + strand, within B158DRAFT_1807at 1906.865 kb on + strand, within B158DRAFT_1807at 1906.896 kb on - strand, within B158DRAFT_1807at 1906.916 kb on + strand, within B158DRAFT_1807at 1906.916 kb on + strand, within B158DRAFT_1807at 1906.924 kb on - strand, within B158DRAFT_1807at 1906.930 kb on + strand, within B158DRAFT_1807at 1906.937 kb on + strand, within B158DRAFT_1807at 1906.999 kb on - strand, within B158DRAFT_1807at 1907.008 kb on - strand, within B158DRAFT_1807at 1907.010 kb on + strand, within B158DRAFT_1807at 1907.051 kb on + strand, within B158DRAFT_1807at 1907.072 kb on + strand, within B158DRAFT_1807at 1907.080 kb on + strand, within B158DRAFT_1807at 1907.080 kb on - strand, within B158DRAFT_1807at 1907.088 kb on + strand, within B158DRAFT_1807at 1907.088 kb on + strand, within B158DRAFT_1807at 1907.088 kb on + strand, within B158DRAFT_1807at 1907.096 kb on - strand, within B158DRAFT_1807at 1907.096 kb on - strand, within B158DRAFT_1807at 1907.131 kb on - strand, within B158DRAFT_1807at 1907.265 kb on - strandat 1907.272 kb on + strandat 1907.289 kb on + strandat 1907.291 kb on + strandat 1907.297 kb on - strandat 1907.354 kb on - strandat 1907.566 kb on + strandat 1907.566 kb on + strandat 1907.566 kb on + strandat 1907.568 kb on + strandat 1907.574 kb on - strandat 1907.574 kb on - strandat 1907.674 kb on - strandat 1907.693 kb on + strandat 1907.703 kb on + strand, within B158DRAFT_1808at 1907.706 kb on - strand, within B158DRAFT_1808at 1907.706 kb on - strand, within B158DRAFT_1808at 1907.711 kb on - strand, within B158DRAFT_1808at 1907.711 kb on - strand, within B158DRAFT_1808at 1907.763 kb on + strand, within B158DRAFT_1808at 1907.802 kb on - strand, within B158DRAFT_1808at 1907.807 kb on - strand, within B158DRAFT_1808at 1907.835 kb on + strand, within B158DRAFT_1808at 1907.860 kb on + strand, within B158DRAFT_1808at 1907.860 kb on + strand, within B158DRAFT_1808at 1907.860 kb on + strand, within B158DRAFT_1808at 1907.860 kb on + strand, within B158DRAFT_1808at 1907.860 kb on + strand, within B158DRAFT_1808at 1907.860 kb on + strand, within B158DRAFT_1808at 1907.862 kb on - strand, within B158DRAFT_1808at 1907.862 kb on - strand, within B158DRAFT_1808at 1907.868 kb on - strand, within B158DRAFT_1808at 1907.868 kb on - strand, within B158DRAFT_1808at 1907.868 kb on - strand, within B158DRAFT_1808at 1907.868 kb on - strand, within B158DRAFT_1808at 1907.913 kb on - strand, within B158DRAFT_1808at 1907.961 kb on + strand, within B158DRAFT_1808at 1907.961 kb on + strand, within B158DRAFT_1808at 1907.961 kb on + strand, within B158DRAFT_1808at 1907.961 kb on + strand, within B158DRAFT_1808at 1908.032 kb on + strand, within B158DRAFT_1808at 1908.037 kb on + strand, within B158DRAFT_1808at 1908.040 kb on - strand, within B158DRAFT_1808at 1908.040 kb on - strand, within B158DRAFT_1808at 1908.040 kb on - strand, within B158DRAFT_1808at 1908.069 kb on - strand, within B158DRAFT_1808at 1908.078 kb on + strand, within B158DRAFT_1808at 1908.086 kb on - strand, within B158DRAFT_1808at 1908.113 kb on + strand, within B158DRAFT_1808at 1908.121 kb on - strand, within B158DRAFT_1808at 1908.121 kb on - strand, within B158DRAFT_1808at 1908.121 kb on - strand, within B158DRAFT_1808at 1908.125 kb on + strand, within B158DRAFT_1808at 1908.126 kb on - strand, within B158DRAFT_1808at 1908.158 kb on - strand, within B158DRAFT_1808at 1908.164 kb on + strand, within B158DRAFT_1808at 1908.172 kb on - strand, within B158DRAFT_1808at 1908.172 kb on - strand, within B158DRAFT_1808at 1908.255 kb on + strand, within B158DRAFT_1808at 1908.260 kb on + strand, within B158DRAFT_1808at 1908.260 kb on + strand, within B158DRAFT_1808at 1908.260 kb on + strand, within B158DRAFT_1808at 1908.260 kb on + strand, within B158DRAFT_1808

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrate 400 mM
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1,906,068 - -1.4
1,906,106 - -0.4
1,906,124 - -0.2
1,906,189 + B158DRAFT_1807 0.10 +0.1
1,906,213 - B158DRAFT_1807 0.12 +0.7
1,906,359 + B158DRAFT_1807 0.24 -0.2
1,906,359 + B158DRAFT_1807 0.24 +0.2
1,906,369 - B158DRAFT_1807 0.25 -0.1
1,906,398 - B158DRAFT_1807 0.27 +0.2
1,906,505 + B158DRAFT_1807 0.36 -0.4
1,906,505 + B158DRAFT_1807 0.36 +1.1
1,906,513 - B158DRAFT_1807 0.37 -0.1
1,906,515 + B158DRAFT_1807 0.37 +0.3
1,906,581 + B158DRAFT_1807 0.42 +0.5
1,906,589 + B158DRAFT_1807 0.43 +0.4
1,906,597 - B158DRAFT_1807 0.44 -0.1
1,906,652 - B158DRAFT_1807 0.48 +0.5
1,906,835 + B158DRAFT_1807 0.63 -0.8
1,906,865 + B158DRAFT_1807 0.65 +0.5
1,906,865 + B158DRAFT_1807 0.65 -0.4
1,906,896 - B158DRAFT_1807 0.68 +0.3
1,906,916 + B158DRAFT_1807 0.70 -0.3
1,906,916 + B158DRAFT_1807 0.70 +0.1
1,906,924 - B158DRAFT_1807 0.70 +0.2
1,906,930 + B158DRAFT_1807 0.71 -0.2
1,906,937 + B158DRAFT_1807 0.71 -0.2
1,906,999 - B158DRAFT_1807 0.76 -0.7
1,907,008 - B158DRAFT_1807 0.77 -0.1
1,907,010 + B158DRAFT_1807 0.77 +0.0
1,907,051 + B158DRAFT_1807 0.81 +0.1
1,907,072 + B158DRAFT_1807 0.82 -0.0
1,907,080 + B158DRAFT_1807 0.83 -0.4
1,907,080 - B158DRAFT_1807 0.83 -0.1
1,907,088 + B158DRAFT_1807 0.84 +0.3
1,907,088 + B158DRAFT_1807 0.84 +0.1
1,907,088 + B158DRAFT_1807 0.84 +0.1
1,907,096 - B158DRAFT_1807 0.84 -0.0
1,907,096 - B158DRAFT_1807 0.84 -0.7
1,907,131 - B158DRAFT_1807 0.87 +0.1
1,907,265 - +0.4
1,907,272 + +0.0
1,907,289 + -0.5
1,907,291 + +0.1
1,907,297 - -0.3
1,907,354 - -1.6
1,907,566 + +0.2
1,907,566 + -0.6
1,907,566 + -0.7
1,907,568 + -0.3
1,907,574 - +0.4
1,907,574 - -0.9
1,907,674 - +0.3
1,907,693 + +0.2
1,907,703 + B158DRAFT_1808 0.10 -1.5
1,907,706 - B158DRAFT_1808 0.11 +0.0
1,907,706 - B158DRAFT_1808 0.11 -1.4
1,907,711 - B158DRAFT_1808 0.11 +0.1
1,907,711 - B158DRAFT_1808 0.11 +0.6
1,907,763 + B158DRAFT_1808 0.17 -0.4
1,907,802 - B158DRAFT_1808 0.22 -0.7
1,907,807 - B158DRAFT_1808 0.22 -0.8
1,907,835 + B158DRAFT_1808 0.26 +0.1
1,907,860 + B158DRAFT_1808 0.28 -0.1
1,907,860 + B158DRAFT_1808 0.28 -0.3
1,907,860 + B158DRAFT_1808 0.28 +0.0
1,907,860 + B158DRAFT_1808 0.28 +0.7
1,907,860 + B158DRAFT_1808 0.28 -0.3
1,907,860 + B158DRAFT_1808 0.28 -0.0
1,907,862 - B158DRAFT_1808 0.29 -0.0
1,907,862 - B158DRAFT_1808 0.29 -0.7
1,907,868 - B158DRAFT_1808 0.29 +0.7
1,907,868 - B158DRAFT_1808 0.29 +0.2
1,907,868 - B158DRAFT_1808 0.29 +0.3
1,907,868 - B158DRAFT_1808 0.29 -0.0
1,907,913 - B158DRAFT_1808 0.34 -0.7
1,907,961 + B158DRAFT_1808 0.40 -0.2
1,907,961 + B158DRAFT_1808 0.40 +0.2
1,907,961 + B158DRAFT_1808 0.40 +0.3
1,907,961 + B158DRAFT_1808 0.40 -0.8
1,908,032 + B158DRAFT_1808 0.48 +0.3
1,908,037 + B158DRAFT_1808 0.49 +0.3
1,908,040 - B158DRAFT_1808 0.49 +0.4
1,908,040 - B158DRAFT_1808 0.49 -0.7
1,908,040 - B158DRAFT_1808 0.49 +0.2
1,908,069 - B158DRAFT_1808 0.52 +0.0
1,908,078 + B158DRAFT_1808 0.53 -0.6
1,908,086 - B158DRAFT_1808 0.54 -0.2
1,908,113 + B158DRAFT_1808 0.57 +0.5
1,908,121 - B158DRAFT_1808 0.58 -0.1
1,908,121 - B158DRAFT_1808 0.58 -0.6
1,908,121 - B158DRAFT_1808 0.58 +1.0
1,908,125 + B158DRAFT_1808 0.59 +0.0
1,908,126 - B158DRAFT_1808 0.59 -0.4
1,908,158 - B158DRAFT_1808 0.63 -0.4
1,908,164 + B158DRAFT_1808 0.63 -0.3
1,908,172 - B158DRAFT_1808 0.64 -0.2
1,908,172 - B158DRAFT_1808 0.64 -0.7
1,908,255 + B158DRAFT_1808 0.74 -0.6
1,908,260 + B158DRAFT_1808 0.74 -0.3
1,908,260 + B158DRAFT_1808 0.74 +0.1
1,908,260 + B158DRAFT_1808 0.74 -0.5
1,908,260 + B158DRAFT_1808 0.74 +0.8

Or see this region's nucleotide sequence