Experiment: m.b. nitrate 400 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1066 and B158DRAFT_1067 are separated by 40 nucleotides B158DRAFT_1067 and B158DRAFT_1068 are separated by 32 nucleotides B158DRAFT_1068 and B158DRAFT_1069 are separated by 21 nucleotides
B158DRAFT_1066: B158DRAFT_1066 - anion transporter, at 1,106,034 to 1,107,428
_1066
B158DRAFT_1067: B158DRAFT_1067 - hypothetical protein, at 1,107,469 to 1,107,729
_1067
B158DRAFT_1068: B158DRAFT_1068 - D-alanyl-D-alanine carboxypeptidase, at 1,107,762 to 1,108,472
_1068
B158DRAFT_1069: B158DRAFT_1069 - succinyldiaminopimelate desuccinylase (EC 3.5.1.18), at 1,108,494 to 1,109,639
_1069
Position (kb)
1107
1108
1109 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1106.787 kb on - strand, within B158DRAFT_1066 at 1106.860 kb on + strand, within B158DRAFT_1066 at 1106.908 kb on - strand, within B158DRAFT_1066 at 1106.909 kb on - strand, within B158DRAFT_1066 at 1106.949 kb on + strand, within B158DRAFT_1066 at 1106.959 kb on + strand, within B158DRAFT_1066 at 1106.963 kb on + strand, within B158DRAFT_1066 at 1106.991 kb on + strand, within B158DRAFT_1066 at 1107.059 kb on + strand, within B158DRAFT_1066 at 1107.149 kb on + strand, within B158DRAFT_1066 at 1107.149 kb on + strand, within B158DRAFT_1066 at 1107.149 kb on + strand, within B158DRAFT_1066 at 1107.157 kb on - strand, within B158DRAFT_1066 at 1107.157 kb on - strand, within B158DRAFT_1066 at 1107.157 kb on - strand, within B158DRAFT_1066 at 1107.157 kb on - strand, within B158DRAFT_1066 at 1107.157 kb on - strand, within B158DRAFT_1066 at 1107.157 kb on - strand, within B158DRAFT_1066 at 1107.157 kb on - strand, within B158DRAFT_1066 at 1107.157 kb on - strand, within B158DRAFT_1066 at 1107.157 kb on - strand, within B158DRAFT_1066 at 1107.157 kb on - strand, within B158DRAFT_1066 at 1107.186 kb on + strand, within B158DRAFT_1066 at 1107.256 kb on - strand, within B158DRAFT_1066 at 1107.311 kb on - strand at 1107.334 kb on + strand at 1107.344 kb on + strand at 1107.344 kb on + strand at 1107.344 kb on + strand at 1107.344 kb on + strand at 1107.344 kb on + strand at 1107.352 kb on - strand at 1107.352 kb on - strand at 1107.352 kb on - strand at 1107.352 kb on - strand at 1107.352 kb on - strand at 1107.352 kb on - strand at 1107.352 kb on - strand at 1107.352 kb on - strand at 1107.354 kb on + strand at 1107.364 kb on + strand at 1107.364 kb on + strand at 1107.367 kb on - strand at 1107.391 kb on - strand at 1107.411 kb on - strand at 1107.417 kb on - strand at 1107.468 kb on - strand at 1107.610 kb on - strand, within B158DRAFT_1067 at 1107.615 kb on + strand, within B158DRAFT_1067 at 1107.621 kb on + strand, within B158DRAFT_1067 at 1107.631 kb on + strand, within B158DRAFT_1067 at 1107.712 kb on + strand at 1107.714 kb on - strand at 1107.736 kb on - strand at 1107.762 kb on + strand at 1107.770 kb on - strand at 1107.777 kb on - strand at 1107.814 kb on - strand at 1108.487 kb on - strand at 1108.509 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrate 400 mM remove 1,106,787 - B158DRAFT_1066 0.54 -0.1 1,106,860 + B158DRAFT_1066 0.59 -0.3 1,106,908 - B158DRAFT_1066 0.63 -0.1 1,106,909 - B158DRAFT_1066 0.63 -1.3 1,106,949 + B158DRAFT_1066 0.66 +0.5 1,106,959 + B158DRAFT_1066 0.66 -0.1 1,106,963 + B158DRAFT_1066 0.67 +0.1 1,106,991 + B158DRAFT_1066 0.69 -0.4 1,107,059 + B158DRAFT_1066 0.73 +0.3 1,107,149 + B158DRAFT_1066 0.80 -0.7 1,107,149 + B158DRAFT_1066 0.80 -0.2 1,107,149 + B158DRAFT_1066 0.80 +0.6 1,107,157 - B158DRAFT_1066 0.81 -0.2 1,107,157 - B158DRAFT_1066 0.81 +0.1 1,107,157 - B158DRAFT_1066 0.81 +0.2 1,107,157 - B158DRAFT_1066 0.81 +0.1 1,107,157 - B158DRAFT_1066 0.81 -0.2 1,107,157 - B158DRAFT_1066 0.81 -3.5 1,107,157 - B158DRAFT_1066 0.81 -0.0 1,107,157 - B158DRAFT_1066 0.81 -2.5 1,107,157 - B158DRAFT_1066 0.81 -1.1 1,107,157 - B158DRAFT_1066 0.81 -0.5 1,107,186 + B158DRAFT_1066 0.83 -0.0 1,107,256 - B158DRAFT_1066 0.88 -1.6 1,107,311 - -0.1 1,107,334 + -1.4 1,107,344 + +0.7 1,107,344 + -2.6 1,107,344 + -0.4 1,107,344 + -1.4 1,107,344 + -0.2 1,107,352 - -3.9 1,107,352 - +0.4 1,107,352 - -1.4 1,107,352 - -0.3 1,107,352 - +0.6 1,107,352 - -0.8 1,107,352 - +0.0 1,107,352 - +1.1 1,107,354 + -0.8 1,107,364 + +0.1 1,107,364 + -2.0 1,107,367 - -2.3 1,107,391 - +0.3 1,107,411 - +1.5 1,107,417 - -0.1 1,107,468 - -0.9 1,107,610 - B158DRAFT_1067 0.54 +0.4 1,107,615 + B158DRAFT_1067 0.56 +1.2 1,107,621 + B158DRAFT_1067 0.58 -0.4 1,107,631 + B158DRAFT_1067 0.62 -0.2 1,107,712 + -0.1 1,107,714 - +0.6 1,107,736 - -0.7 1,107,762 + -0.4 1,107,770 - -0.6 1,107,777 - +0.6 1,107,814 - +0.4 1,108,487 - +0.1 1,108,509 - +0.4
Or see this region's nucleotide sequence