Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2407 and B158DRAFT_2408 are separated by 61 nucleotides B158DRAFT_2408 and B158DRAFT_2409 are separated by 14 nucleotides B158DRAFT_2409 and B158DRAFT_2410 overlap by 11 nucleotides B158DRAFT_2410 and B158DRAFT_2411 are separated by 3 nucleotides
B158DRAFT_2407: B158DRAFT_2407 - riboflavin kinase/FMN adenylyltransferase, at 578,008 to 578,943
_2407
B158DRAFT_2408: B158DRAFT_2408 - Isoleucyl-tRNA synthetase (EC 6.1.1.5), at 579,005 to 581,809
_2408
B158DRAFT_2409: B158DRAFT_2409 - lipoprotein signal peptidase, at 581,824 to 582,366
_2409
B158DRAFT_2410: B158DRAFT_2410 - FKBP-type peptidyl-prolyl cis-trans isomerases 2, at 582,356 to 582,793
_2410
B158DRAFT_2411: B158DRAFT_2411 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2), at 582,797 to 583,732
_2411
Position (kb) 579
580
581
582 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 578.502 kb on + strand, within B158DRAFT_2407 at 578.956 kb on + strand at 578.956 kb on + strand at 578.956 kb on + strand at 578.956 kb on + strand at 578.991 kb on + strand at 582.281 kb on + strand, within B158DRAFT_2409 at 582.281 kb on + strand, within B158DRAFT_2409 at 582.281 kb on + strand, within B158DRAFT_2409 at 582.281 kb on + strand, within B158DRAFT_2409 at 582.282 kb on + strand, within B158DRAFT_2409 at 582.291 kb on + strand, within B158DRAFT_2409 at 582.321 kb on + strand at 582.429 kb on + strand, within B158DRAFT_2410 at 582.500 kb on + strand, within B158DRAFT_2410 at 582.500 kb on + strand, within B158DRAFT_2410 at 582.568 kb on + strand, within B158DRAFT_2410 at 582.573 kb on + strand, within B158DRAFT_2410 at 582.648 kb on + strand, within B158DRAFT_2410 at 582.656 kb on + strand, within B158DRAFT_2410 at 582.658 kb on + strand, within B158DRAFT_2410 at 582.658 kb on + strand, within B158DRAFT_2410 at 582.694 kb on + strand, within B158DRAFT_2410 at 582.740 kb on + strand, within B158DRAFT_2410 at 582.740 kb on + strand, within B158DRAFT_2410
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 578,502 + B158DRAFT_2407 0.53 +1.6 578,956 + +1.8 578,956 + -2.1 578,956 + +0.5 578,956 + -1.0 578,991 + -1.5 582,281 + B158DRAFT_2409 0.84 +0.9 582,281 + B158DRAFT_2409 0.84 +0.6 582,281 + B158DRAFT_2409 0.84 +1.2 582,281 + B158DRAFT_2409 0.84 -1.7 582,282 + B158DRAFT_2409 0.84 -2.8 582,291 + B158DRAFT_2409 0.86 +0.6 582,321 + +0.1 582,429 + B158DRAFT_2410 0.17 +0.2 582,500 + B158DRAFT_2410 0.33 +0.7 582,500 + B158DRAFT_2410 0.33 -1.5 582,568 + B158DRAFT_2410 0.48 -3.5 582,573 + B158DRAFT_2410 0.50 -0.7 582,648 + B158DRAFT_2410 0.67 -0.9 582,656 + B158DRAFT_2410 0.68 -2.0 582,658 + B158DRAFT_2410 0.69 -1.4 582,658 + B158DRAFT_2410 0.69 +0.7 582,694 + B158DRAFT_2410 0.77 -0.8 582,740 + B158DRAFT_2410 0.88 -1.1 582,740 + B158DRAFT_2410 0.88 -2.1
Or see this region's nucleotide sequence