Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2252 and B158DRAFT_2253 overlap by 1 nucleotides B158DRAFT_2253 and B158DRAFT_2254 are separated by 129 nucleotides
B158DRAFT_2252: B158DRAFT_2252 - sodium/proline symporter, at 414,588 to 416,177
_2252
B158DRAFT_2253: B158DRAFT_2253 - Acetyltransferases, at 416,177 to 416,659
_2253
B158DRAFT_2254: B158DRAFT_2254 - formate-dependent phosphoribosylglycinamide formyltransferase (EC 6.3.4.-), at 416,789 to 417,970
_2254
Position (kb) 416
417 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 415.216 kb on + strand, within B158DRAFT_2252 at 415.237 kb on + strand, within B158DRAFT_2252 at 415.297 kb on + strand, within B158DRAFT_2252 at 415.298 kb on - strand, within B158DRAFT_2252 at 415.305 kb on - strand, within B158DRAFT_2252 at 415.338 kb on - strand, within B158DRAFT_2252 at 415.362 kb on + strand, within B158DRAFT_2252 at 415.370 kb on - strand, within B158DRAFT_2252 at 415.376 kb on - strand, within B158DRAFT_2252 at 415.376 kb on - strand, within B158DRAFT_2252 at 415.381 kb on - strand, within B158DRAFT_2252 at 415.414 kb on - strand, within B158DRAFT_2252 at 415.414 kb on - strand, within B158DRAFT_2252 at 415.455 kb on + strand, within B158DRAFT_2252 at 415.455 kb on + strand, within B158DRAFT_2252 at 415.463 kb on - strand, within B158DRAFT_2252 at 415.463 kb on - strand, within B158DRAFT_2252 at 415.463 kb on - strand, within B158DRAFT_2252 at 415.481 kb on + strand, within B158DRAFT_2252 at 415.487 kb on - strand, within B158DRAFT_2252 at 415.540 kb on - strand, within B158DRAFT_2252 at 415.580 kb on + strand, within B158DRAFT_2252 at 415.632 kb on - strand, within B158DRAFT_2252 at 415.701 kb on - strand, within B158DRAFT_2252 at 415.716 kb on + strand, within B158DRAFT_2252 at 415.716 kb on + strand, within B158DRAFT_2252 at 415.724 kb on - strand, within B158DRAFT_2252 at 415.749 kb on + strand, within B158DRAFT_2252 at 415.749 kb on + strand, within B158DRAFT_2252 at 415.749 kb on + strand, within B158DRAFT_2252 at 415.757 kb on - strand, within B158DRAFT_2252 at 415.868 kb on - strand, within B158DRAFT_2252 at 415.875 kb on + strand, within B158DRAFT_2252 at 415.880 kb on + strand, within B158DRAFT_2252 at 415.880 kb on + strand, within B158DRAFT_2252 at 415.888 kb on - strand, within B158DRAFT_2252 at 415.907 kb on - strand, within B158DRAFT_2252 at 415.940 kb on + strand, within B158DRAFT_2252 at 415.940 kb on + strand, within B158DRAFT_2252 at 416.000 kb on - strand, within B158DRAFT_2252 at 416.005 kb on - strand, within B158DRAFT_2252 at 416.008 kb on + strand, within B158DRAFT_2252 at 416.008 kb on + strand, within B158DRAFT_2252 at 416.008 kb on + strand, within B158DRAFT_2252 at 416.016 kb on - strand, within B158DRAFT_2252 at 416.016 kb on - strand, within B158DRAFT_2252 at 416.021 kb on - strand at 416.070 kb on - strand at 416.070 kb on - strand at 416.070 kb on - strand at 416.070 kb on - strand at 416.070 kb on - strand at 416.070 kb on - strand at 416.295 kb on + strand, within B158DRAFT_2253 at 416.300 kb on + strand, within B158DRAFT_2253 at 416.378 kb on - strand, within B158DRAFT_2253 at 416.491 kb on - strand, within B158DRAFT_2253 at 416.516 kb on + strand, within B158DRAFT_2253 at 416.540 kb on + strand, within B158DRAFT_2253 at 416.540 kb on + strand, within B158DRAFT_2253 at 416.540 kb on + strand, within B158DRAFT_2253 at 416.545 kb on + strand, within B158DRAFT_2253 at 416.586 kb on + strand, within B158DRAFT_2253 at 416.594 kb on - strand, within B158DRAFT_2253 at 416.653 kb on + strand at 416.719 kb on + strand at 416.740 kb on + strand at 416.847 kb on - strand at 416.862 kb on + strand at 416.862 kb on + strand at 416.877 kb on + strand at 416.884 kb on - strand at 416.892 kb on + strand at 416.894 kb on - strand at 417.087 kb on + strand, within B158DRAFT_2254 at 417.134 kb on + strand, within B158DRAFT_2254 at 417.158 kb on + strand, within B158DRAFT_2254 at 417.199 kb on - strand, within B158DRAFT_2254 at 417.221 kb on + strand, within B158DRAFT_2254 at 417.221 kb on + strand, within B158DRAFT_2254 at 417.221 kb on + strand, within B158DRAFT_2254 at 417.221 kb on + strand, within B158DRAFT_2254 at 417.229 kb on - strand, within B158DRAFT_2254 at 417.229 kb on - strand, within B158DRAFT_2254 at 417.233 kb on + strand, within B158DRAFT_2254 at 417.256 kb on + strand, within B158DRAFT_2254 at 417.272 kb on + strand, within B158DRAFT_2254 at 417.278 kb on + strand, within B158DRAFT_2254 at 417.289 kb on + strand, within B158DRAFT_2254 at 417.350 kb on + strand, within B158DRAFT_2254 at 417.350 kb on + strand, within B158DRAFT_2254 at 417.350 kb on + strand, within B158DRAFT_2254 at 417.350 kb on + strand, within B158DRAFT_2254 at 417.356 kb on + strand, within B158DRAFT_2254 at 417.358 kb on - strand, within B158DRAFT_2254 at 417.358 kb on - strand, within B158DRAFT_2254 at 417.358 kb on - strand, within B158DRAFT_2254 at 417.358 kb on - strand, within B158DRAFT_2254 at 417.358 kb on - strand, within B158DRAFT_2254 at 417.358 kb on - strand, within B158DRAFT_2254 at 417.358 kb on - strand, within B158DRAFT_2254 at 417.358 kb on - strand, within B158DRAFT_2254 at 417.358 kb on - strand, within B158DRAFT_2254 at 417.368 kb on + strand, within B158DRAFT_2254 at 417.376 kb on - strand, within B158DRAFT_2254 at 417.376 kb on - strand, within B158DRAFT_2254 at 417.434 kb on - strand, within B158DRAFT_2254 at 417.444 kb on - strand, within B158DRAFT_2254 at 417.460 kb on - strand, within B158DRAFT_2254 at 417.483 kb on + strand, within B158DRAFT_2254 at 417.483 kb on + strand, within B158DRAFT_2254 at 417.535 kb on - strand, within B158DRAFT_2254 at 417.545 kb on + strand, within B158DRAFT_2254 at 417.552 kb on + strand, within B158DRAFT_2254 at 417.650 kb on + strand, within B158DRAFT_2254
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 415,216 + B158DRAFT_2252 0.39 +0.4 415,237 + B158DRAFT_2252 0.41 -0.9 415,297 + B158DRAFT_2252 0.45 +1.1 415,298 - B158DRAFT_2252 0.45 -1.8 415,305 - B158DRAFT_2252 0.45 -0.1 415,338 - B158DRAFT_2252 0.47 -0.3 415,362 + B158DRAFT_2252 0.49 -1.7 415,370 - B158DRAFT_2252 0.49 -1.7 415,376 - B158DRAFT_2252 0.50 +0.2 415,376 - B158DRAFT_2252 0.50 -1.6 415,381 - B158DRAFT_2252 0.50 +1.6 415,414 - B158DRAFT_2252 0.52 -2.8 415,414 - B158DRAFT_2252 0.52 -0.7 415,455 + B158DRAFT_2252 0.55 -1.2 415,455 + B158DRAFT_2252 0.55 -1.5 415,463 - B158DRAFT_2252 0.55 -0.6 415,463 - B158DRAFT_2252 0.55 -0.2 415,463 - B158DRAFT_2252 0.55 -1.4 415,481 + B158DRAFT_2252 0.56 -0.7 415,487 - B158DRAFT_2252 0.57 -3.8 415,540 - B158DRAFT_2252 0.60 -1.5 415,580 + B158DRAFT_2252 0.62 -0.3 415,632 - B158DRAFT_2252 0.66 -1.5 415,701 - B158DRAFT_2252 0.70 +1.5 415,716 + B158DRAFT_2252 0.71 -1.7 415,716 + B158DRAFT_2252 0.71 -1.5 415,724 - B158DRAFT_2252 0.71 -2.5 415,749 + B158DRAFT_2252 0.73 -1.7 415,749 + B158DRAFT_2252 0.73 -0.0 415,749 + B158DRAFT_2252 0.73 -0.5 415,757 - B158DRAFT_2252 0.74 -1.2 415,868 - B158DRAFT_2252 0.81 -0.0 415,875 + B158DRAFT_2252 0.81 +0.1 415,880 + B158DRAFT_2252 0.81 +1.4 415,880 + B158DRAFT_2252 0.81 -0.5 415,888 - B158DRAFT_2252 0.82 -1.2 415,907 - B158DRAFT_2252 0.83 +0.0 415,940 + B158DRAFT_2252 0.85 +0.6 415,940 + B158DRAFT_2252 0.85 -0.7 416,000 - B158DRAFT_2252 0.89 -1.7 416,005 - B158DRAFT_2252 0.89 +0.1 416,008 + B158DRAFT_2252 0.89 -1.4 416,008 + B158DRAFT_2252 0.89 +0.6 416,008 + B158DRAFT_2252 0.89 -1.5 416,016 - B158DRAFT_2252 0.90 -2.9 416,016 - B158DRAFT_2252 0.90 -1.1 416,021 - -1.1 416,070 - -1.1 416,070 - -2.6 416,070 - +0.4 416,070 - -0.8 416,070 - -1.4 416,070 - -1.7 416,295 + B158DRAFT_2253 0.24 -1.3 416,300 + B158DRAFT_2253 0.25 -2.0 416,378 - B158DRAFT_2253 0.42 -0.7 416,491 - B158DRAFT_2253 0.65 -1.8 416,516 + B158DRAFT_2253 0.70 +0.0 416,540 + B158DRAFT_2253 0.75 -1.3 416,540 + B158DRAFT_2253 0.75 -0.6 416,540 + B158DRAFT_2253 0.75 -0.7 416,545 + B158DRAFT_2253 0.76 -1.2 416,586 + B158DRAFT_2253 0.85 +1.2 416,594 - B158DRAFT_2253 0.86 -1.2 416,653 + -1.9 416,719 + -1.0 416,740 + +0.2 416,847 - -0.3 416,862 + +0.2 416,862 + -0.6 416,877 + -1.1 416,884 - -2.8 416,892 + -1.3 416,894 - -0.4 417,087 + B158DRAFT_2254 0.25 -0.0 417,134 + B158DRAFT_2254 0.29 -0.8 417,158 + B158DRAFT_2254 0.31 -1.8 417,199 - B158DRAFT_2254 0.35 -1.4 417,221 + B158DRAFT_2254 0.37 -0.3 417,221 + B158DRAFT_2254 0.37 -0.5 417,221 + B158DRAFT_2254 0.37 -1.7 417,221 + B158DRAFT_2254 0.37 +0.6 417,229 - B158DRAFT_2254 0.37 -1.0 417,229 - B158DRAFT_2254 0.37 -0.6 417,233 + B158DRAFT_2254 0.38 -2.4 417,256 + B158DRAFT_2254 0.40 -1.1 417,272 + B158DRAFT_2254 0.41 -0.9 417,278 + B158DRAFT_2254 0.41 -1.2 417,289 + B158DRAFT_2254 0.42 +3.0 417,350 + B158DRAFT_2254 0.47 -0.7 417,350 + B158DRAFT_2254 0.47 +1.6 417,350 + B158DRAFT_2254 0.47 -1.5 417,350 + B158DRAFT_2254 0.47 -1.5 417,356 + B158DRAFT_2254 0.48 -0.9 417,358 - B158DRAFT_2254 0.48 -0.8 417,358 - B158DRAFT_2254 0.48 -0.8 417,358 - B158DRAFT_2254 0.48 -1.3 417,358 - B158DRAFT_2254 0.48 -1.3 417,358 - B158DRAFT_2254 0.48 -1.8 417,358 - B158DRAFT_2254 0.48 -0.6 417,358 - B158DRAFT_2254 0.48 -0.9 417,358 - B158DRAFT_2254 0.48 -1.5 417,358 - B158DRAFT_2254 0.48 +1.4 417,368 + B158DRAFT_2254 0.49 -1.1 417,376 - B158DRAFT_2254 0.50 -2.4 417,376 - B158DRAFT_2254 0.50 -2.4 417,434 - B158DRAFT_2254 0.55 -0.9 417,444 - B158DRAFT_2254 0.55 -1.4 417,460 - B158DRAFT_2254 0.57 -1.7 417,483 + B158DRAFT_2254 0.59 +0.7 417,483 + B158DRAFT_2254 0.59 -0.4 417,535 - B158DRAFT_2254 0.63 -2.1 417,545 + B158DRAFT_2254 0.64 -2.2 417,552 + B158DRAFT_2254 0.65 -1.1 417,650 + B158DRAFT_2254 0.73 +2.6
Or see this region's nucleotide sequence