Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2212 and B158DRAFT_2213 overlap by 41 nucleotides B158DRAFT_2213 and B158DRAFT_2214 overlap by 8 nucleotides B158DRAFT_2214 and B158DRAFT_2215 are separated by 104 nucleotides
B158DRAFT_2212: B158DRAFT_2212 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 359,530 to 361,419
_2212
B158DRAFT_2213: B158DRAFT_2213 - hypothetical protein, at 361,379 to 361,987
_2213
B158DRAFT_2214: B158DRAFT_2214 - hypothetical protein, at 361,980 to 362,531
_2214
B158DRAFT_2215: B158DRAFT_2215 - Na+/H+-dicarboxylate symporters, at 362,636 to 363,946
_2215
Position (kb) 361
362
363 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 361.037 kb on + strand, within B158DRAFT_2212 at 361.037 kb on + strand, within B158DRAFT_2212 at 361.038 kb on - strand, within B158DRAFT_2212 at 361.058 kb on - strand, within B158DRAFT_2212 at 361.141 kb on + strand, within B158DRAFT_2212 at 361.141 kb on + strand, within B158DRAFT_2212 at 361.147 kb on - strand, within B158DRAFT_2212 at 361.149 kb on - strand, within B158DRAFT_2212 at 361.149 kb on - strand, within B158DRAFT_2212 at 361.189 kb on + strand, within B158DRAFT_2212 at 361.199 kb on + strand, within B158DRAFT_2212 at 361.204 kb on - strand, within B158DRAFT_2212 at 361.207 kb on - strand, within B158DRAFT_2212 at 361.212 kb on - strand, within B158DRAFT_2212 at 361.238 kb on + strand at 361.259 kb on + strand at 361.267 kb on - strand at 361.267 kb on - strand at 361.277 kb on - strand at 361.325 kb on + strand at 361.333 kb on - strand at 361.463 kb on + strand, within B158DRAFT_2213 at 361.463 kb on + strand, within B158DRAFT_2213 at 361.505 kb on - strand, within B158DRAFT_2213 at 361.525 kb on + strand, within B158DRAFT_2213 at 361.593 kb on - strand, within B158DRAFT_2213 at 361.593 kb on - strand, within B158DRAFT_2213 at 361.636 kb on - strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.662 kb on + strand, within B158DRAFT_2213 at 361.702 kb on + strand, within B158DRAFT_2213 at 361.710 kb on - strand, within B158DRAFT_2213 at 361.710 kb on - strand, within B158DRAFT_2213 at 361.712 kb on + strand, within B158DRAFT_2213 at 361.712 kb on + strand, within B158DRAFT_2213 at 361.722 kb on - strand, within B158DRAFT_2213 at 361.774 kb on + strand, within B158DRAFT_2213 at 361.791 kb on + strand, within B158DRAFT_2213 at 361.826 kb on - strand, within B158DRAFT_2213 at 361.826 kb on - strand, within B158DRAFT_2213 at 361.871 kb on - strand, within B158DRAFT_2213 at 361.871 kb on - strand, within B158DRAFT_2213 at 362.003 kb on + strand at 362.003 kb on + strand at 362.003 kb on + strand at 362.011 kb on - strand at 362.011 kb on - strand at 362.011 kb on - strand at 362.049 kb on + strand, within B158DRAFT_2214 at 362.110 kb on - strand, within B158DRAFT_2214 at 362.222 kb on + strand, within B158DRAFT_2214 at 362.237 kb on + strand, within B158DRAFT_2214 at 362.238 kb on - strand, within B158DRAFT_2214 at 362.242 kb on + strand, within B158DRAFT_2214 at 362.317 kb on + strand, within B158DRAFT_2214 at 362.318 kb on - strand, within B158DRAFT_2214 at 362.318 kb on - strand, within B158DRAFT_2214 at 362.354 kb on - strand, within B158DRAFT_2214 at 362.452 kb on - strand, within B158DRAFT_2214 at 362.472 kb on + strand, within B158DRAFT_2214 at 362.472 kb on + strand, within B158DRAFT_2214 at 362.472 kb on + strand, within B158DRAFT_2214 at 362.473 kb on + strand, within B158DRAFT_2214 at 362.480 kb on - strand at 362.563 kb on - strand at 362.593 kb on - strand at 362.679 kb on + strand at 362.718 kb on - strand at 362.718 kb on - strand at 362.757 kb on + strand at 362.773 kb on + strand, within B158DRAFT_2215 at 362.819 kb on - strand, within B158DRAFT_2215 at 362.824 kb on - strand, within B158DRAFT_2215 at 362.912 kb on - strand, within B158DRAFT_2215 at 362.929 kb on + strand, within B158DRAFT_2215 at 362.929 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on - strand, within B158DRAFT_2215 at 362.937 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.950 kb on - strand, within B158DRAFT_2215 at 362.964 kb on + strand, within B158DRAFT_2215 at 362.972 kb on - strand, within B158DRAFT_2215 at 362.972 kb on - strand, within B158DRAFT_2215 at 362.985 kb on + strand, within B158DRAFT_2215 at 363.019 kb on + strand, within B158DRAFT_2215 at 363.019 kb on + strand, within B158DRAFT_2215 at 363.021 kb on - strand, within B158DRAFT_2215 at 363.033 kb on + strand, within B158DRAFT_2215 at 363.046 kb on + strand, within B158DRAFT_2215 at 363.075 kb on + strand, within B158DRAFT_2215 at 363.119 kb on + strand, within B158DRAFT_2215 at 363.127 kb on - strand, within B158DRAFT_2215 at 363.127 kb on - strand, within B158DRAFT_2215 at 363.138 kb on + strand, within B158DRAFT_2215 at 363.195 kb on - strand, within B158DRAFT_2215 at 363.355 kb on - strand, within B158DRAFT_2215 at 363.496 kb on + strand, within B158DRAFT_2215 at 363.496 kb on + strand, within B158DRAFT_2215
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 361,037 + B158DRAFT_2212 0.80 -1.8 361,037 + B158DRAFT_2212 0.80 -0.8 361,038 - B158DRAFT_2212 0.80 -2.2 361,058 - B158DRAFT_2212 0.81 -0.8 361,141 + B158DRAFT_2212 0.85 -0.2 361,141 + B158DRAFT_2212 0.85 -0.7 361,147 - B158DRAFT_2212 0.86 +0.2 361,149 - B158DRAFT_2212 0.86 -0.7 361,149 - B158DRAFT_2212 0.86 -1.0 361,189 + B158DRAFT_2212 0.88 -0.1 361,199 + B158DRAFT_2212 0.88 -1.6 361,204 - B158DRAFT_2212 0.89 -1.5 361,207 - B158DRAFT_2212 0.89 +1.9 361,212 - B158DRAFT_2212 0.89 -0.8 361,238 + -0.8 361,259 + +0.4 361,267 - -0.1 361,267 - -0.7 361,277 - -2.2 361,325 + +1.1 361,333 - -0.3 361,463 + B158DRAFT_2213 0.14 -1.6 361,463 + B158DRAFT_2213 0.14 -1.7 361,505 - B158DRAFT_2213 0.21 -0.4 361,525 + B158DRAFT_2213 0.24 -1.2 361,593 - B158DRAFT_2213 0.35 -0.9 361,593 - B158DRAFT_2213 0.35 +0.9 361,636 - B158DRAFT_2213 0.42 -1.3 361,638 + B158DRAFT_2213 0.43 -1.9 361,638 + B158DRAFT_2213 0.43 -0.6 361,638 + B158DRAFT_2213 0.43 -0.1 361,638 + B158DRAFT_2213 0.43 -0.8 361,638 + B158DRAFT_2213 0.43 -0.6 361,638 + B158DRAFT_2213 0.43 -2.1 361,638 + B158DRAFT_2213 0.43 -0.7 361,638 + B158DRAFT_2213 0.43 -2.1 361,638 + B158DRAFT_2213 0.43 -0.5 361,638 + B158DRAFT_2213 0.43 -0.9 361,646 - B158DRAFT_2213 0.44 +0.5 361,646 - B158DRAFT_2213 0.44 -2.0 361,646 - B158DRAFT_2213 0.44 -0.4 361,646 - B158DRAFT_2213 0.44 -1.3 361,646 - B158DRAFT_2213 0.44 +0.1 361,646 - B158DRAFT_2213 0.44 -2.2 361,646 - B158DRAFT_2213 0.44 -1.0 361,646 - B158DRAFT_2213 0.44 +0.5 361,646 - B158DRAFT_2213 0.44 -2.1 361,646 - B158DRAFT_2213 0.44 -0.9 361,646 - B158DRAFT_2213 0.44 +0.6 361,662 + B158DRAFT_2213 0.46 -0.4 361,702 + B158DRAFT_2213 0.53 -0.4 361,710 - B158DRAFT_2213 0.54 -1.2 361,710 - B158DRAFT_2213 0.54 -0.0 361,712 + B158DRAFT_2213 0.55 +0.2 361,712 + B158DRAFT_2213 0.55 -1.4 361,722 - B158DRAFT_2213 0.56 +0.0 361,774 + B158DRAFT_2213 0.65 -1.5 361,791 + B158DRAFT_2213 0.68 -0.6 361,826 - B158DRAFT_2213 0.73 +2.1 361,826 - B158DRAFT_2213 0.73 -0.6 361,871 - B158DRAFT_2213 0.81 -0.7 361,871 - B158DRAFT_2213 0.81 -0.3 362,003 + +0.1 362,003 + +0.7 362,003 + -2.1 362,011 - -1.1 362,011 - -0.2 362,011 - -1.0 362,049 + B158DRAFT_2214 0.12 -2.8 362,110 - B158DRAFT_2214 0.24 -0.6 362,222 + B158DRAFT_2214 0.44 +0.8 362,237 + B158DRAFT_2214 0.47 -1.8 362,238 - B158DRAFT_2214 0.47 -0.3 362,242 + B158DRAFT_2214 0.47 -1.0 362,317 + B158DRAFT_2214 0.61 +0.6 362,318 - B158DRAFT_2214 0.61 -1.1 362,318 - B158DRAFT_2214 0.61 -1.0 362,354 - B158DRAFT_2214 0.68 -1.0 362,452 - B158DRAFT_2214 0.86 -0.2 362,472 + B158DRAFT_2214 0.89 -1.1 362,472 + B158DRAFT_2214 0.89 -0.8 362,472 + B158DRAFT_2214 0.89 +0.2 362,473 + B158DRAFT_2214 0.89 -1.8 362,480 - -0.4 362,563 - +0.5 362,593 - +0.1 362,679 + -0.3 362,718 - -1.1 362,718 - -1.2 362,757 + -1.3 362,773 + B158DRAFT_2215 0.10 -1.2 362,819 - B158DRAFT_2215 0.14 -1.0 362,824 - B158DRAFT_2215 0.14 +0.2 362,912 - B158DRAFT_2215 0.21 -0.0 362,929 + B158DRAFT_2215 0.22 -1.5 362,929 + B158DRAFT_2215 0.22 +0.3 362,937 + B158DRAFT_2215 0.23 +1.3 362,937 + B158DRAFT_2215 0.23 +0.4 362,937 + B158DRAFT_2215 0.23 -0.8 362,937 + B158DRAFT_2215 0.23 -1.7 362,937 + B158DRAFT_2215 0.23 -0.8 362,937 + B158DRAFT_2215 0.23 -1.4 362,937 + B158DRAFT_2215 0.23 -0.8 362,937 + B158DRAFT_2215 0.23 -2.2 362,937 + B158DRAFT_2215 0.23 -1.1 362,937 + B158DRAFT_2215 0.23 -1.3 362,937 + B158DRAFT_2215 0.23 +0.4 362,937 + B158DRAFT_2215 0.23 +1.6 362,937 - B158DRAFT_2215 0.23 +0.4 362,937 - B158DRAFT_2215 0.23 -0.3 362,945 - B158DRAFT_2215 0.24 -0.8 362,945 - B158DRAFT_2215 0.24 -3.0 362,945 - B158DRAFT_2215 0.24 +2.2 362,945 - B158DRAFT_2215 0.24 -1.8 362,945 - B158DRAFT_2215 0.24 -1.2 362,945 - B158DRAFT_2215 0.24 -0.7 362,945 - B158DRAFT_2215 0.24 +0.6 362,945 - B158DRAFT_2215 0.24 -1.6 362,945 - B158DRAFT_2215 0.24 -1.0 362,950 - B158DRAFT_2215 0.24 -0.9 362,964 + B158DRAFT_2215 0.25 -0.8 362,972 - B158DRAFT_2215 0.26 -1.3 362,972 - B158DRAFT_2215 0.26 -1.7 362,985 + B158DRAFT_2215 0.27 -0.2 363,019 + B158DRAFT_2215 0.29 -0.7 363,019 + B158DRAFT_2215 0.29 -2.1 363,021 - B158DRAFT_2215 0.29 -0.4 363,033 + B158DRAFT_2215 0.30 +0.4 363,046 + B158DRAFT_2215 0.31 -1.4 363,075 + B158DRAFT_2215 0.33 -1.1 363,119 + B158DRAFT_2215 0.37 -2.6 363,127 - B158DRAFT_2215 0.37 -0.1 363,127 - B158DRAFT_2215 0.37 -0.6 363,138 + B158DRAFT_2215 0.38 -1.8 363,195 - B158DRAFT_2215 0.43 -1.4 363,355 - B158DRAFT_2215 0.55 -1.6 363,496 + B158DRAFT_2215 0.66 +0.2 363,496 + B158DRAFT_2215 0.66 -1.1
Or see this region's nucleotide sequence