Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2196 and B158DRAFT_2197 overlap by 1 nucleotides B158DRAFT_2197 and B158DRAFT_2198 overlap by 1 nucleotides B158DRAFT_2198 and B158DRAFT_2199 overlap by 53 nucleotides B158DRAFT_2199 and B158DRAFT_2200 overlap by 4 nucleotides B158DRAFT_2200 and B158DRAFT_2201 overlap by 4 nucleotides
B158DRAFT_2196: B158DRAFT_2196 - multisubunit sodium/proton antiporter, MrpE subunit (TC 2.A.63.1), at 341,850 to 342,335
_2196
B158DRAFT_2197: B158DRAFT_2197 - multisubunit sodium/proton antiporter, MrpF subunit (TC 2.A.63.1), at 342,335 to 342,610
_2197
B158DRAFT_2198: B158DRAFT_2198 - multisubunit sodium/proton antiporter, MrpG subunit (TC 2.A.63.1), at 342,610 to 342,981
_2198
B158DRAFT_2199: B158DRAFT_2199 - multisubunit sodium/proton antiporter, MrpB subunit (TC 2.A.63.1), at 342,929 to 343,996
_2199
B158DRAFT_2200: B158DRAFT_2200 - multisubunit sodium/proton antiporter, MrpC subunit (TC 2.A.63.1), at 343,993 to 344,361
_2200
B158DRAFT_2201: B158DRAFT_2201 - multisubunit sodium/proton antiporter, MrpD subunit (TC 2.A.63.1), at 344,358 to 345,836
_2201
Position (kb) 342
343
344 Strain fitness (log2 ratio) -2
-1
0
1 at 341.940 kb on + strand, within B158DRAFT_2196 at 342.205 kb on + strand, within B158DRAFT_2196 at 342.205 kb on + strand, within B158DRAFT_2196 at 342.213 kb on - strand, within B158DRAFT_2196 at 342.228 kb on - strand, within B158DRAFT_2196 at 342.402 kb on + strand, within B158DRAFT_2197 at 342.470 kb on + strand, within B158DRAFT_2197 at 342.470 kb on + strand, within B158DRAFT_2197 at 342.478 kb on - strand, within B158DRAFT_2197 at 342.478 kb on - strand, within B158DRAFT_2197 at 342.517 kb on + strand, within B158DRAFT_2197 at 342.555 kb on - strand, within B158DRAFT_2197 at 342.682 kb on + strand, within B158DRAFT_2198 at 342.899 kb on + strand, within B158DRAFT_2198 at 342.954 kb on + strand at 343.225 kb on - strand, within B158DRAFT_2199 at 343.225 kb on - strand, within B158DRAFT_2199 at 343.363 kb on - strand, within B158DRAFT_2199 at 343.774 kb on - strand, within B158DRAFT_2199 at 343.819 kb on + strand, within B158DRAFT_2199 at 343.914 kb on + strand at 344.257 kb on + strand, within B158DRAFT_2200 at 344.265 kb on - strand, within B158DRAFT_2200 at 344.338 kb on + strand at 344.719 kb on - strand, within B158DRAFT_2201 at 344.794 kb on + strand, within B158DRAFT_2201
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 341,940 + B158DRAFT_2196 0.19 +1.7 342,205 + B158DRAFT_2196 0.73 -1.6 342,205 + B158DRAFT_2196 0.73 -1.7 342,213 - B158DRAFT_2196 0.75 +0.8 342,228 - B158DRAFT_2196 0.78 -1.2 342,402 + B158DRAFT_2197 0.24 +0.6 342,470 + B158DRAFT_2197 0.49 -0.1 342,470 + B158DRAFT_2197 0.49 +1.1 342,478 - B158DRAFT_2197 0.52 -2.5 342,478 - B158DRAFT_2197 0.52 +0.9 342,517 + B158DRAFT_2197 0.66 -0.3 342,555 - B158DRAFT_2197 0.80 -1.5 342,682 + B158DRAFT_2198 0.19 -2.5 342,899 + B158DRAFT_2198 0.78 -0.5 342,954 + +0.5 343,225 - B158DRAFT_2199 0.28 -0.8 343,225 - B158DRAFT_2199 0.28 +1.1 343,363 - B158DRAFT_2199 0.41 -1.0 343,774 - B158DRAFT_2199 0.79 -0.8 343,819 + B158DRAFT_2199 0.83 -1.3 343,914 + +0.1 344,257 + B158DRAFT_2200 0.72 +0.5 344,265 - B158DRAFT_2200 0.74 -1.7 344,338 + -1.7 344,719 - B158DRAFT_2201 0.24 -1.1 344,794 + B158DRAFT_2201 0.29 +0.0
Or see this region's nucleotide sequence