Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2195 and B158DRAFT_2196 are separated by 291 nucleotides B158DRAFT_2196 and B158DRAFT_2197 overlap by 1 nucleotides B158DRAFT_2197 and B158DRAFT_2198 overlap by 1 nucleotides B158DRAFT_2198 and B158DRAFT_2199 overlap by 53 nucleotides
B158DRAFT_2195: B158DRAFT_2195 - Predicted aminopeptidases, at 340,164 to 341,558
_2195
B158DRAFT_2196: B158DRAFT_2196 - multisubunit sodium/proton antiporter, MrpE subunit (TC 2.A.63.1), at 341,850 to 342,335
_2196
B158DRAFT_2197: B158DRAFT_2197 - multisubunit sodium/proton antiporter, MrpF subunit (TC 2.A.63.1), at 342,335 to 342,610
_2197
B158DRAFT_2198: B158DRAFT_2198 - multisubunit sodium/proton antiporter, MrpG subunit (TC 2.A.63.1), at 342,610 to 342,981
_2198
B158DRAFT_2199: B158DRAFT_2199 - multisubunit sodium/proton antiporter, MrpB subunit (TC 2.A.63.1), at 342,929 to 343,996
_2199
Position (kb) 341
342
343 Strain fitness (log2 ratio) -2
-1
0
1
2 at 340.897 kb on - strand, within B158DRAFT_2195 at 340.922 kb on + strand, within B158DRAFT_2195 at 340.922 kb on + strand, within B158DRAFT_2195 at 340.922 kb on + strand, within B158DRAFT_2195 at 340.930 kb on - strand, within B158DRAFT_2195 at 340.935 kb on - strand, within B158DRAFT_2195 at 341.054 kb on + strand, within B158DRAFT_2195 at 341.054 kb on - strand, within B158DRAFT_2195 at 341.147 kb on - strand, within B158DRAFT_2195 at 341.147 kb on - strand, within B158DRAFT_2195 at 341.294 kb on + strand, within B158DRAFT_2195 at 341.299 kb on + strand, within B158DRAFT_2195 at 341.309 kb on + strand, within B158DRAFT_2195 at 341.316 kb on + strand, within B158DRAFT_2195 at 341.317 kb on - strand, within B158DRAFT_2195 at 341.355 kb on + strand, within B158DRAFT_2195 at 341.355 kb on + strand, within B158DRAFT_2195 at 341.355 kb on + strand, within B158DRAFT_2195 at 341.355 kb on + strand, within B158DRAFT_2195 at 341.355 kb on + strand, within B158DRAFT_2195 at 341.363 kb on - strand, within B158DRAFT_2195 at 341.363 kb on - strand, within B158DRAFT_2195 at 341.363 kb on - strand, within B158DRAFT_2195 at 341.363 kb on - strand, within B158DRAFT_2195 at 341.410 kb on + strand, within B158DRAFT_2195 at 341.413 kb on - strand, within B158DRAFT_2195 at 341.432 kb on + strand at 341.440 kb on - strand at 341.440 kb on - strand at 341.473 kb on + strand at 341.533 kb on - strand at 341.726 kb on + strand at 341.734 kb on - strand at 341.741 kb on + strand at 341.805 kb on + strand at 341.883 kb on - strand at 341.903 kb on + strand, within B158DRAFT_2196 at 341.940 kb on + strand, within B158DRAFT_2196 at 342.205 kb on + strand, within B158DRAFT_2196 at 342.205 kb on + strand, within B158DRAFT_2196 at 342.213 kb on - strand, within B158DRAFT_2196 at 342.228 kb on - strand, within B158DRAFT_2196 at 342.402 kb on + strand, within B158DRAFT_2197 at 342.470 kb on + strand, within B158DRAFT_2197 at 342.470 kb on + strand, within B158DRAFT_2197 at 342.478 kb on - strand, within B158DRAFT_2197 at 342.478 kb on - strand, within B158DRAFT_2197 at 342.517 kb on + strand, within B158DRAFT_2197 at 342.555 kb on - strand, within B158DRAFT_2197 at 342.682 kb on + strand, within B158DRAFT_2198 at 342.899 kb on + strand, within B158DRAFT_2198 at 342.954 kb on + strand at 343.225 kb on - strand, within B158DRAFT_2199 at 343.225 kb on - strand, within B158DRAFT_2199
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 340,897 - B158DRAFT_2195 0.53 -0.6 340,922 + B158DRAFT_2195 0.54 +0.4 340,922 + B158DRAFT_2195 0.54 +0.8 340,922 + B158DRAFT_2195 0.54 -0.7 340,930 - B158DRAFT_2195 0.55 +2.4 340,935 - B158DRAFT_2195 0.55 +0.4 341,054 + B158DRAFT_2195 0.64 +0.9 341,054 - B158DRAFT_2195 0.64 +0.4 341,147 - B158DRAFT_2195 0.70 -0.6 341,147 - B158DRAFT_2195 0.70 -2.2 341,294 + B158DRAFT_2195 0.81 -0.6 341,299 + B158DRAFT_2195 0.81 -0.1 341,309 + B158DRAFT_2195 0.82 -0.2 341,316 + B158DRAFT_2195 0.83 -2.0 341,317 - B158DRAFT_2195 0.83 +0.9 341,355 + B158DRAFT_2195 0.85 -0.7 341,355 + B158DRAFT_2195 0.85 -1.1 341,355 + B158DRAFT_2195 0.85 +0.5 341,355 + B158DRAFT_2195 0.85 +1.1 341,355 + B158DRAFT_2195 0.85 -0.4 341,363 - B158DRAFT_2195 0.86 -1.4 341,363 - B158DRAFT_2195 0.86 +0.7 341,363 - B158DRAFT_2195 0.86 -0.8 341,363 - B158DRAFT_2195 0.86 -0.5 341,410 + B158DRAFT_2195 0.89 -0.3 341,413 - B158DRAFT_2195 0.90 +1.4 341,432 + -0.7 341,440 - +0.7 341,440 - -0.9 341,473 + +0.9 341,533 - -0.3 341,726 + -0.2 341,734 - +1.3 341,741 + +1.4 341,805 + +0.4 341,883 - -0.0 341,903 + B158DRAFT_2196 0.11 +1.7 341,940 + B158DRAFT_2196 0.19 +1.7 342,205 + B158DRAFT_2196 0.73 -1.6 342,205 + B158DRAFT_2196 0.73 -1.7 342,213 - B158DRAFT_2196 0.75 +0.8 342,228 - B158DRAFT_2196 0.78 -1.2 342,402 + B158DRAFT_2197 0.24 +0.6 342,470 + B158DRAFT_2197 0.49 -0.1 342,470 + B158DRAFT_2197 0.49 +1.1 342,478 - B158DRAFT_2197 0.52 -2.5 342,478 - B158DRAFT_2197 0.52 +0.9 342,517 + B158DRAFT_2197 0.66 -0.3 342,555 - B158DRAFT_2197 0.80 -1.5 342,682 + B158DRAFT_2198 0.19 -2.5 342,899 + B158DRAFT_2198 0.78 -0.5 342,954 + +0.5 343,225 - B158DRAFT_2199 0.28 -0.8 343,225 - B158DRAFT_2199 0.28 +1.1
Or see this region's nucleotide sequence