Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2184

Experiment: m.b. nitrite 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2183 and B158DRAFT_2184 are separated by 179 nucleotidesB158DRAFT_2184 and B158DRAFT_2185 are separated by 15 nucleotidesB158DRAFT_2185 and B158DRAFT_2186 are separated by 74 nucleotides B158DRAFT_2183: B158DRAFT_2183 - periplasmic serine protease, Do/DeqQ family, at 329,837 to 331,138 _2183 B158DRAFT_2184: B158DRAFT_2184 - GTP-binding protein LepA, at 331,318 to 333,126 _2184 B158DRAFT_2185: B158DRAFT_2185 - signal peptidase I, bacterial type, at 333,142 to 334,008 _2185 B158DRAFT_2186: B158DRAFT_2186 - hypothetical protein, at 334,083 to 334,448 _2186 Position (kb) 331 332 333 334Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8 9at 330.393 kb on - strand, within B158DRAFT_2183at 330.395 kb on + strand, within B158DRAFT_2183at 330.413 kb on - strand, within B158DRAFT_2183at 330.413 kb on - strand, within B158DRAFT_2183at 330.532 kb on + strand, within B158DRAFT_2183at 330.546 kb on + strand, within B158DRAFT_2183at 330.555 kb on - strand, within B158DRAFT_2183at 330.572 kb on + strand, within B158DRAFT_2183at 330.572 kb on + strand, within B158DRAFT_2183at 330.572 kb on + strand, within B158DRAFT_2183at 330.577 kb on + strand, within B158DRAFT_2183at 330.577 kb on + strand, within B158DRAFT_2183at 330.577 kb on + strand, within B158DRAFT_2183at 330.577 kb on + strand, within B158DRAFT_2183at 330.580 kb on - strand, within B158DRAFT_2183at 330.580 kb on - strand, within B158DRAFT_2183at 330.580 kb on - strand, within B158DRAFT_2183at 330.580 kb on - strand, within B158DRAFT_2183at 330.585 kb on - strand, within B158DRAFT_2183at 330.590 kb on - strand, within B158DRAFT_2183at 330.635 kb on - strand, within B158DRAFT_2183at 330.662 kb on + strand, within B158DRAFT_2183at 330.662 kb on + strand, within B158DRAFT_2183at 330.663 kb on + strand, within B158DRAFT_2183at 330.663 kb on + strand, within B158DRAFT_2183at 330.670 kb on + strand, within B158DRAFT_2183at 330.671 kb on - strand, within B158DRAFT_2183at 330.671 kb on - strand, within B158DRAFT_2183at 330.671 kb on - strand, within B158DRAFT_2183at 330.697 kb on + strand, within B158DRAFT_2183at 330.697 kb on + strand, within B158DRAFT_2183at 330.697 kb on + strand, within B158DRAFT_2183at 330.697 kb on + strand, within B158DRAFT_2183at 330.697 kb on + strand, within B158DRAFT_2183at 330.697 kb on + strand, within B158DRAFT_2183at 330.705 kb on - strand, within B158DRAFT_2183at 330.705 kb on - strand, within B158DRAFT_2183at 330.716 kb on + strand, within B158DRAFT_2183at 330.716 kb on + strand, within B158DRAFT_2183at 330.721 kb on + strand, within B158DRAFT_2183at 330.724 kb on - strand, within B158DRAFT_2183at 330.729 kb on - strand, within B158DRAFT_2183at 330.812 kb on + strand, within B158DRAFT_2183at 330.854 kb on + strand, within B158DRAFT_2183at 330.854 kb on + strand, within B158DRAFT_2183at 330.862 kb on - strand, within B158DRAFT_2183at 330.919 kb on + strand, within B158DRAFT_2183at 330.927 kb on + strand, within B158DRAFT_2183at 330.950 kb on + strand, within B158DRAFT_2183at 331.034 kb on - strandat 331.092 kb on - strandat 331.093 kb on - strandat 331.099 kb on + strandat 331.102 kb on - strandat 331.107 kb on - strandat 331.107 kb on - strandat 331.133 kb on + strandat 331.141 kb on - strandat 331.167 kb on + strandat 331.167 kb on + strandat 331.167 kb on + strandat 331.172 kb on + strandat 331.175 kb on - strandat 331.175 kb on - strandat 331.243 kb on + strandat 331.297 kb on + strandat 331.297 kb on + strandat 331.313 kb on + strandat 331.315 kb on + strandat 331.320 kb on + strandat 331.333 kb on - strandat 331.404 kb on + strandat 331.414 kb on + strandat 331.459 kb on + strandat 331.469 kb on - strandat 331.497 kb on + strandat 331.499 kb on + strand, within B158DRAFT_2184at 331.499 kb on + strand, within B158DRAFT_2184at 331.504 kb on + strand, within B158DRAFT_2184at 331.507 kb on - strand, within B158DRAFT_2184at 331.540 kb on + strand, within B158DRAFT_2184at 331.559 kb on + strand, within B158DRAFT_2184at 331.559 kb on + strand, within B158DRAFT_2184at 331.654 kb on + strand, within B158DRAFT_2184at 331.741 kb on + strand, within B158DRAFT_2184at 331.801 kb on + strand, within B158DRAFT_2184at 331.801 kb on + strand, within B158DRAFT_2184at 331.801 kb on + strand, within B158DRAFT_2184at 331.872 kb on + strand, within B158DRAFT_2184at 331.872 kb on + strand, within B158DRAFT_2184at 331.894 kb on + strand, within B158DRAFT_2184at 331.894 kb on + strand, within B158DRAFT_2184at 332.118 kb on + strand, within B158DRAFT_2184at 332.124 kb on + strand, within B158DRAFT_2184at 332.134 kb on + strand, within B158DRAFT_2184at 332.142 kb on + strand, within B158DRAFT_2184at 332.196 kb on + strand, within B158DRAFT_2184at 332.196 kb on + strand, within B158DRAFT_2184at 332.208 kb on + strand, within B158DRAFT_2184at 332.208 kb on + strand, within B158DRAFT_2184at 332.208 kb on + strand, within B158DRAFT_2184at 332.208 kb on + strand, within B158DRAFT_2184at 332.208 kb on + strand, within B158DRAFT_2184at 332.213 kb on + strand, within B158DRAFT_2184at 332.234 kb on + strand, within B158DRAFT_2184at 332.234 kb on + strand, within B158DRAFT_2184at 332.234 kb on + strand, within B158DRAFT_2184at 332.273 kb on + strand, within B158DRAFT_2184at 332.313 kb on + strand, within B158DRAFT_2184at 332.313 kb on + strand, within B158DRAFT_2184at 332.386 kb on + strand, within B158DRAFT_2184at 332.461 kb on + strand, within B158DRAFT_2184at 332.593 kb on + strand, within B158DRAFT_2184at 332.608 kb on + strand, within B158DRAFT_2184at 332.608 kb on + strand, within B158DRAFT_2184at 332.644 kb on + strand, within B158DRAFT_2184at 332.644 kb on + strand, within B158DRAFT_2184at 332.677 kb on + strand, within B158DRAFT_2184at 332.697 kb on + strand, within B158DRAFT_2184at 332.748 kb on + strand, within B158DRAFT_2184at 332.848 kb on + strand, within B158DRAFT_2184at 332.876 kb on + strand, within B158DRAFT_2184at 332.877 kb on + strand, within B158DRAFT_2184at 332.982 kb on + strandat 332.982 kb on + strandat 332.982 kb on + strandat 332.982 kb on + strandat 332.982 kb on + strandat 333.008 kb on + strandat 333.008 kb on + strandat 333.989 kb on + strandat 334.063 kb on + strandat 334.063 kb on + strandat 334.063 kb on + strandat 334.063 kb on + strandat 334.107 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM
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330,393 - B158DRAFT_2183 0.43 +0.2
330,395 + B158DRAFT_2183 0.43 +1.8
330,413 - B158DRAFT_2183 0.44 -0.6
330,413 - B158DRAFT_2183 0.44 -2.0
330,532 + B158DRAFT_2183 0.53 -1.4
330,546 + B158DRAFT_2183 0.54 -1.7
330,555 - B158DRAFT_2183 0.55 -0.1
330,572 + B158DRAFT_2183 0.56 -0.2
330,572 + B158DRAFT_2183 0.56 +0.2
330,572 + B158DRAFT_2183 0.56 -2.8
330,577 + B158DRAFT_2183 0.57 -0.1
330,577 + B158DRAFT_2183 0.57 +0.2
330,577 + B158DRAFT_2183 0.57 -1.1
330,577 + B158DRAFT_2183 0.57 +0.2
330,580 - B158DRAFT_2183 0.57 -0.2
330,580 - B158DRAFT_2183 0.57 +0.4
330,580 - B158DRAFT_2183 0.57 -0.3
330,580 - B158DRAFT_2183 0.57 +0.1
330,585 - B158DRAFT_2183 0.57 -0.2
330,590 - B158DRAFT_2183 0.58 +2.4
330,635 - B158DRAFT_2183 0.61 -0.0
330,662 + B158DRAFT_2183 0.63 -2.1
330,662 + B158DRAFT_2183 0.63 +0.3
330,663 + B158DRAFT_2183 0.63 +0.3
330,663 + B158DRAFT_2183 0.63 +0.2
330,670 + B158DRAFT_2183 0.64 -0.5
330,671 - B158DRAFT_2183 0.64 +0.4
330,671 - B158DRAFT_2183 0.64 -0.8
330,671 - B158DRAFT_2183 0.64 -1.1
330,697 + B158DRAFT_2183 0.66 +0.3
330,697 + B158DRAFT_2183 0.66 -1.2
330,697 + B158DRAFT_2183 0.66 -0.5
330,697 + B158DRAFT_2183 0.66 +0.7
330,697 + B158DRAFT_2183 0.66 -0.0
330,697 + B158DRAFT_2183 0.66 +0.1
330,705 - B158DRAFT_2183 0.67 -0.5
330,705 - B158DRAFT_2183 0.67 +1.1
330,716 + B158DRAFT_2183 0.68 +1.1
330,716 + B158DRAFT_2183 0.68 -0.5
330,721 + B158DRAFT_2183 0.68 -0.1
330,724 - B158DRAFT_2183 0.68 -0.4
330,729 - B158DRAFT_2183 0.69 -0.9
330,812 + B158DRAFT_2183 0.75 -0.3
330,854 + B158DRAFT_2183 0.78 +1.8
330,854 + B158DRAFT_2183 0.78 +0.1
330,862 - B158DRAFT_2183 0.79 -2.0
330,919 + B158DRAFT_2183 0.83 -0.9
330,927 + B158DRAFT_2183 0.84 +0.7
330,950 + B158DRAFT_2183 0.85 -0.9
331,034 - -0.8
331,092 - -1.7
331,093 - -2.2
331,099 + -3.0
331,102 - -1.9
331,107 - -0.9
331,107 - -0.8
331,133 + -1.2
331,141 - -0.8
331,167 + +1.4
331,167 + +1.1
331,167 + -0.7
331,172 + -0.8
331,175 - -2.7
331,175 - -0.3
331,243 + +0.4
331,297 + -0.5
331,297 + +2.1
331,313 + +1.7
331,315 + +2.6
331,320 + +2.2
331,333 - +0.7
331,404 + +1.1
331,414 + -0.7
331,459 + -0.4
331,469 - +2.3
331,497 + +1.7
331,499 + B158DRAFT_2184 0.10 +0.7
331,499 + B158DRAFT_2184 0.10 +2.2
331,504 + B158DRAFT_2184 0.10 +2.3
331,507 - B158DRAFT_2184 0.10 +2.7
331,540 + B158DRAFT_2184 0.12 -0.8
331,559 + B158DRAFT_2184 0.13 -0.2
331,559 + B158DRAFT_2184 0.13 +1.9
331,654 + B158DRAFT_2184 0.19 +1.3
331,741 + B158DRAFT_2184 0.23 +0.5
331,801 + B158DRAFT_2184 0.27 -1.5
331,801 + B158DRAFT_2184 0.27 +1.9
331,801 + B158DRAFT_2184 0.27 -0.1
331,872 + B158DRAFT_2184 0.31 +9.5
331,872 + B158DRAFT_2184 0.31 +1.9
331,894 + B158DRAFT_2184 0.32 +1.7
331,894 + B158DRAFT_2184 0.32 +0.5
332,118 + B158DRAFT_2184 0.44 +1.0
332,124 + B158DRAFT_2184 0.45 +0.8
332,134 + B158DRAFT_2184 0.45 +1.4
332,142 + B158DRAFT_2184 0.46 +0.2
332,196 + B158DRAFT_2184 0.49 +1.0
332,196 + B158DRAFT_2184 0.49 +3.1
332,208 + B158DRAFT_2184 0.49 +1.7
332,208 + B158DRAFT_2184 0.49 +1.5
332,208 + B158DRAFT_2184 0.49 +0.9
332,208 + B158DRAFT_2184 0.49 +1.0
332,208 + B158DRAFT_2184 0.49 +1.5
332,213 + B158DRAFT_2184 0.49 +3.5
332,234 + B158DRAFT_2184 0.51 -1.3
332,234 + B158DRAFT_2184 0.51 +0.7
332,234 + B158DRAFT_2184 0.51 +2.3
332,273 + B158DRAFT_2184 0.53 +2.3
332,313 + B158DRAFT_2184 0.55 +1.1
332,313 + B158DRAFT_2184 0.55 -1.6
332,386 + B158DRAFT_2184 0.59 +1.4
332,461 + B158DRAFT_2184 0.63 +1.2
332,593 + B158DRAFT_2184 0.70 +0.5
332,608 + B158DRAFT_2184 0.71 -1.8
332,608 + B158DRAFT_2184 0.71 -1.6
332,644 + B158DRAFT_2184 0.73 -0.9
332,644 + B158DRAFT_2184 0.73 -1.7
332,677 + B158DRAFT_2184 0.75 +0.2
332,697 + B158DRAFT_2184 0.76 +0.3
332,748 + B158DRAFT_2184 0.79 +1.0
332,848 + B158DRAFT_2184 0.85 -1.1
332,876 + B158DRAFT_2184 0.86 +0.1
332,877 + B158DRAFT_2184 0.86 +0.3
332,982 + -1.1
332,982 + +1.5
332,982 + +1.6
332,982 + +0.8
332,982 + +1.0
333,008 + +1.1
333,008 + -1.2
333,989 + -0.1
334,063 + -0.6
334,063 + +0.4
334,063 + +1.0
334,063 + -0.7
334,107 + +2.3

Or see this region's nucleotide sequence