Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2056 and B158DRAFT_2057 are separated by 372 nucleotides B158DRAFT_2057 and B158DRAFT_2058 are separated by 67 nucleotides B158DRAFT_2058 and B158DRAFT_2059 are separated by 7 nucleotides
B158DRAFT_2056: B158DRAFT_2056 - Periplasmic protease, at 190,386 to 191,882
_2056
B158DRAFT_2057: B158DRAFT_2057 - ribose-phosphate pyrophosphokinase, at 192,255 to 193,205
_2057
B158DRAFT_2058: B158DRAFT_2058 - tRNA_Gln_TTG, at 193,273 to 193,347
_2058
B158DRAFT_2059: B158DRAFT_2059 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148), at 193,355 to 194,230
_2059
Position (kb) 192
193
194 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 191.390 kb on + strand, within B158DRAFT_2056 at 191.474 kb on + strand, within B158DRAFT_2056 at 191.482 kb on - strand, within B158DRAFT_2056 at 191.482 kb on - strand, within B158DRAFT_2056 at 191.482 kb on - strand, within B158DRAFT_2056 at 191.485 kb on + strand, within B158DRAFT_2056 at 191.609 kb on + strand, within B158DRAFT_2056 at 191.624 kb on + strand, within B158DRAFT_2056 at 191.630 kb on + strand, within B158DRAFT_2056 at 191.638 kb on - strand, within B158DRAFT_2056 at 191.639 kb on - strand, within B158DRAFT_2056 at 191.648 kb on + strand, within B158DRAFT_2056 at 191.665 kb on + strand, within B158DRAFT_2056 at 191.673 kb on - strand, within B158DRAFT_2056 at 191.701 kb on + strand, within B158DRAFT_2056 at 191.793 kb on - strand at 191.871 kb on - strand at 191.874 kb on + strand at 191.973 kb on + strand at 192.032 kb on - strand at 192.093 kb on + strand at 192.096 kb on + strand at 192.104 kb on - strand at 192.111 kb on - strand at 192.111 kb on - strand at 192.140 kb on - strand at 194.183 kb on - strand at 194.192 kb on - strand at 194.192 kb on - strand at 194.192 kb on - strand at 194.192 kb on - strand at 194.192 kb on - strand at 194.192 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 191,390 + B158DRAFT_2056 0.67 -0.5 191,474 + B158DRAFT_2056 0.73 -2.3 191,482 - B158DRAFT_2056 0.73 -0.4 191,482 - B158DRAFT_2056 0.73 -1.3 191,482 - B158DRAFT_2056 0.73 +0.1 191,485 + B158DRAFT_2056 0.73 +0.0 191,609 + B158DRAFT_2056 0.82 -1.1 191,624 + B158DRAFT_2056 0.83 +0.3 191,630 + B158DRAFT_2056 0.83 -0.6 191,638 - B158DRAFT_2056 0.84 +0.6 191,639 - B158DRAFT_2056 0.84 -0.2 191,648 + B158DRAFT_2056 0.84 -0.9 191,665 + B158DRAFT_2056 0.85 +1.3 191,673 - B158DRAFT_2056 0.86 -0.8 191,701 + B158DRAFT_2056 0.88 +0.3 191,793 - -0.5 191,871 - -0.3 191,874 + +3.0 191,973 + -2.0 192,032 - -1.3 192,093 + -2.7 192,096 + -0.3 192,104 - -0.9 192,111 - -1.0 192,111 - +0.7 192,140 - +0.5 194,183 - -1.5 194,192 - +2.7 194,192 - -1.5 194,192 - +1.0 194,192 - -2.8 194,192 - -2.3 194,192 - -3.1
Or see this region's nucleotide sequence