Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2035 and B158DRAFT_2036 overlap by 1 nucleotides B158DRAFT_2036 and B158DRAFT_2037 are separated by 123 nucleotides
B158DRAFT_2035: B158DRAFT_2035 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase, at 167,063 to 168,415
_2035
B158DRAFT_2036: B158DRAFT_2036 - polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases, at 168,415 to 169,050
_2036
B158DRAFT_2037: B158DRAFT_2037 - ABC-type multidrug transport system, ATPase component, at 169,174 to 170,106
_2037
Position (kb) 168
169
170 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 167.423 kb on - strand, within B158DRAFT_2035 at 167.513 kb on - strand, within B158DRAFT_2035 at 167.771 kb on + strand, within B158DRAFT_2035 at 167.821 kb on + strand, within B158DRAFT_2035 at 167.829 kb on - strand, within B158DRAFT_2035 at 167.856 kb on + strand, within B158DRAFT_2035 at 167.864 kb on - strand, within B158DRAFT_2035 at 167.891 kb on + strand, within B158DRAFT_2035 at 167.899 kb on - strand, within B158DRAFT_2035 at 168.024 kb on - strand, within B158DRAFT_2035 at 168.118 kb on + strand, within B158DRAFT_2035 at 168.134 kb on + strand, within B158DRAFT_2035 at 168.142 kb on - strand, within B158DRAFT_2035 at 168.198 kb on + strand, within B158DRAFT_2035 at 168.198 kb on + strand, within B158DRAFT_2035 at 168.198 kb on + strand, within B158DRAFT_2035 at 168.206 kb on - strand, within B158DRAFT_2035 at 168.254 kb on + strand, within B158DRAFT_2035 at 169.037 kb on + strand at 169.092 kb on + strand at 169.100 kb on - strand at 169.100 kb on - strand at 169.122 kb on - strand at 169.124 kb on + strand at 169.124 kb on + strand at 169.132 kb on - strand at 169.132 kb on - strand at 169.132 kb on - strand at 169.134 kb on + strand at 169.134 kb on - strand at 169.142 kb on - strand at 169.249 kb on - strand at 169.249 kb on - strand at 169.289 kb on - strand, within B158DRAFT_2037 at 169.313 kb on + strand, within B158DRAFT_2037 at 169.321 kb on - strand, within B158DRAFT_2037 at 169.344 kb on + strand, within B158DRAFT_2037 at 169.364 kb on - strand, within B158DRAFT_2037 at 169.372 kb on - strand, within B158DRAFT_2037 at 169.385 kb on - strand, within B158DRAFT_2037 at 169.400 kb on - strand, within B158DRAFT_2037 at 169.464 kb on + strand, within B158DRAFT_2037 at 169.527 kb on + strand, within B158DRAFT_2037 at 169.567 kb on + strand, within B158DRAFT_2037 at 169.567 kb on + strand, within B158DRAFT_2037 at 169.575 kb on - strand, within B158DRAFT_2037 at 169.658 kb on + strand, within B158DRAFT_2037 at 169.659 kb on + strand, within B158DRAFT_2037 at 169.659 kb on + strand, within B158DRAFT_2037 at 169.686 kb on + strand, within B158DRAFT_2037 at 169.696 kb on + strand, within B158DRAFT_2037 at 169.696 kb on + strand, within B158DRAFT_2037 at 169.704 kb on - strand, within B158DRAFT_2037 at 169.736 kb on - strand, within B158DRAFT_2037 at 169.750 kb on + strand, within B158DRAFT_2037 at 169.757 kb on + strand, within B158DRAFT_2037 at 169.765 kb on - strand, within B158DRAFT_2037 at 169.765 kb on - strand, within B158DRAFT_2037 at 169.775 kb on + strand, within B158DRAFT_2037 at 169.865 kb on + strand, within B158DRAFT_2037 at 169.870 kb on + strand, within B158DRAFT_2037 at 169.873 kb on - strand, within B158DRAFT_2037 at 169.880 kb on + strand, within B158DRAFT_2037 at 169.883 kb on - strand, within B158DRAFT_2037 at 169.916 kb on + strand, within B158DRAFT_2037 at 169.924 kb on - strand, within B158DRAFT_2037 at 169.970 kb on + strand, within B158DRAFT_2037
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 167,423 - B158DRAFT_2035 0.27 -1.1 167,513 - B158DRAFT_2035 0.33 -2.6 167,771 + B158DRAFT_2035 0.52 +0.2 167,821 + B158DRAFT_2035 0.56 +0.8 167,829 - B158DRAFT_2035 0.57 +1.1 167,856 + B158DRAFT_2035 0.59 -1.1 167,864 - B158DRAFT_2035 0.59 +2.6 167,891 + B158DRAFT_2035 0.61 +1.3 167,899 - B158DRAFT_2035 0.62 -0.9 168,024 - B158DRAFT_2035 0.71 +0.2 168,118 + B158DRAFT_2035 0.78 +1.5 168,134 + B158DRAFT_2035 0.79 +0.1 168,142 - B158DRAFT_2035 0.80 -0.4 168,198 + B158DRAFT_2035 0.84 +1.7 168,198 + B158DRAFT_2035 0.84 +1.5 168,198 + B158DRAFT_2035 0.84 -1.3 168,206 - B158DRAFT_2035 0.84 +2.0 168,254 + B158DRAFT_2035 0.88 +1.5 169,037 + -0.0 169,092 + +0.1 169,100 - -0.9 169,100 - -1.6 169,122 - +0.2 169,124 + +0.1 169,124 + -0.0 169,132 - +0.3 169,132 - -0.7 169,132 - -2.1 169,134 + -0.7 169,134 - -1.0 169,142 - +0.1 169,249 - +0.3 169,249 - -1.1 169,289 - B158DRAFT_2037 0.12 -0.6 169,313 + B158DRAFT_2037 0.15 -0.7 169,321 - B158DRAFT_2037 0.16 +0.6 169,344 + B158DRAFT_2037 0.18 +1.1 169,364 - B158DRAFT_2037 0.20 -1.9 169,372 - B158DRAFT_2037 0.21 +0.3 169,385 - B158DRAFT_2037 0.23 +0.8 169,400 - B158DRAFT_2037 0.24 +0.4 169,464 + B158DRAFT_2037 0.31 -0.5 169,527 + B158DRAFT_2037 0.38 -0.9 169,567 + B158DRAFT_2037 0.42 +0.2 169,567 + B158DRAFT_2037 0.42 +0.9 169,575 - B158DRAFT_2037 0.43 -2.4 169,658 + B158DRAFT_2037 0.52 -1.3 169,659 + B158DRAFT_2037 0.52 -0.0 169,659 + B158DRAFT_2037 0.52 -1.2 169,686 + B158DRAFT_2037 0.55 -0.4 169,696 + B158DRAFT_2037 0.56 -1.5 169,696 + B158DRAFT_2037 0.56 -1.9 169,704 - B158DRAFT_2037 0.57 -3.2 169,736 - B158DRAFT_2037 0.60 +1.3 169,750 + B158DRAFT_2037 0.62 -0.9 169,757 + B158DRAFT_2037 0.62 -0.8 169,765 - B158DRAFT_2037 0.63 -1.4 169,765 - B158DRAFT_2037 0.63 +2.2 169,775 + B158DRAFT_2037 0.64 -1.5 169,865 + B158DRAFT_2037 0.74 +0.1 169,870 + B158DRAFT_2037 0.75 +0.9 169,873 - B158DRAFT_2037 0.75 +3.3 169,880 + B158DRAFT_2037 0.76 -1.0 169,883 - B158DRAFT_2037 0.76 +1.6 169,916 + B158DRAFT_2037 0.80 -1.3 169,924 - B158DRAFT_2037 0.80 -0.3 169,970 + B158DRAFT_2037 0.85 +1.4
Or see this region's nucleotide sequence