Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2027 and B158DRAFT_2028 are separated by 54 nucleotides B158DRAFT_2028 and B158DRAFT_2029 are separated by 57 nucleotides B158DRAFT_2029 and B158DRAFT_2030 are separated by 267 nucleotides
B158DRAFT_2027: B158DRAFT_2027 - RNA polymerase sigma factor, sigma-70 family, at 157,048 to 157,572
_2027
B158DRAFT_2028: B158DRAFT_2028 - hypothetical protein, at 157,627 to 158,199
_2028
B158DRAFT_2029: B158DRAFT_2029 - Inorganic pyrophosphatase, at 158,257 to 158,787
_2029
B158DRAFT_2030: B158DRAFT_2030 - vacuolar-type H(+)-translocating pyrophosphatase, at 159,055 to 161,058
_2030
Position (kb) 158
159 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 157.295 kb on + strand, within B158DRAFT_2027 at 157.295 kb on + strand, within B158DRAFT_2027 at 157.368 kb on + strand, within B158DRAFT_2027 at 157.431 kb on + strand, within B158DRAFT_2027 at 157.439 kb on - strand, within B158DRAFT_2027 at 157.439 kb on - strand, within B158DRAFT_2027 at 157.460 kb on - strand, within B158DRAFT_2027 at 157.503 kb on + strand, within B158DRAFT_2027 at 157.515 kb on + strand, within B158DRAFT_2027 at 157.515 kb on + strand, within B158DRAFT_2027 at 157.520 kb on + strand at 157.523 kb on - strand at 157.525 kb on + strand at 157.525 kb on + strand at 157.525 kb on + strand at 157.533 kb on - strand at 157.543 kb on - strand at 157.550 kb on + strand at 157.705 kb on - strand, within B158DRAFT_2028 at 157.840 kb on + strand, within B158DRAFT_2028 at 157.840 kb on + strand, within B158DRAFT_2028 at 157.840 kb on + strand, within B158DRAFT_2028 at 157.848 kb on - strand, within B158DRAFT_2028 at 157.853 kb on + strand, within B158DRAFT_2028 at 157.910 kb on - strand, within B158DRAFT_2028 at 157.951 kb on + strand, within B158DRAFT_2028 at 157.995 kb on + strand, within B158DRAFT_2028 at 157.995 kb on + strand, within B158DRAFT_2028 at 158.003 kb on - strand, within B158DRAFT_2028 at 158.003 kb on - strand, within B158DRAFT_2028 at 158.028 kb on + strand, within B158DRAFT_2028 at 158.036 kb on - strand, within B158DRAFT_2028 at 158.036 kb on - strand, within B158DRAFT_2028 at 158.036 kb on - strand, within B158DRAFT_2028 at 158.042 kb on - strand, within B158DRAFT_2028 at 158.047 kb on - strand, within B158DRAFT_2028 at 158.047 kb on - strand, within B158DRAFT_2028 at 158.047 kb on - strand, within B158DRAFT_2028 at 158.076 kb on + strand, within B158DRAFT_2028 at 158.094 kb on + strand, within B158DRAFT_2028 at 158.113 kb on - strand, within B158DRAFT_2028 at 158.149 kb on + strand at 158.282 kb on - strand at 158.282 kb on - strand at 158.953 kb on + strand at 158.963 kb on + strand at 159.097 kb on + strand at 159.097 kb on + strand at 159.111 kb on - strand at 159.207 kb on - strand at 159.280 kb on + strand, within B158DRAFT_2030 at 159.288 kb on - strand, within B158DRAFT_2030 at 159.320 kb on - strand, within B158DRAFT_2030 at 159.321 kb on - strand, within B158DRAFT_2030 at 159.322 kb on + strand, within B158DRAFT_2030 at 159.323 kb on - strand, within B158DRAFT_2030 at 159.325 kb on - strand, within B158DRAFT_2030 at 159.340 kb on + strand, within B158DRAFT_2030 at 159.345 kb on + strand, within B158DRAFT_2030 at 159.348 kb on - strand, within B158DRAFT_2030 at 159.366 kb on + strand, within B158DRAFT_2030 at 159.375 kb on + strand, within B158DRAFT_2030 at 159.388 kb on - strand, within B158DRAFT_2030 at 159.399 kb on - strand, within B158DRAFT_2030 at 159.415 kb on + strand, within B158DRAFT_2030 at 159.416 kb on + strand, within B158DRAFT_2030 at 159.417 kb on - strand, within B158DRAFT_2030 at 159.417 kb on - strand, within B158DRAFT_2030 at 159.478 kb on - strand, within B158DRAFT_2030 at 159.570 kb on - strand, within B158DRAFT_2030 at 159.621 kb on - strand, within B158DRAFT_2030 at 159.627 kb on - strand, within B158DRAFT_2030 at 159.627 kb on - strand, within B158DRAFT_2030 at 159.754 kb on + strand, within B158DRAFT_2030 at 159.786 kb on + strand, within B158DRAFT_2030
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 157,295 + B158DRAFT_2027 0.47 +1.5 157,295 + B158DRAFT_2027 0.47 -0.4 157,368 + B158DRAFT_2027 0.61 -0.3 157,431 + B158DRAFT_2027 0.73 -1.5 157,439 - B158DRAFT_2027 0.74 -1.0 157,439 - B158DRAFT_2027 0.74 -0.2 157,460 - B158DRAFT_2027 0.78 -0.1 157,503 + B158DRAFT_2027 0.87 -0.0 157,515 + B158DRAFT_2027 0.89 -1.9 157,515 + B158DRAFT_2027 0.89 +0.2 157,520 + +0.5 157,523 - +0.9 157,525 + -1.9 157,525 + -0.8 157,525 + -0.2 157,533 - +1.2 157,543 - -2.2 157,550 + -1.2 157,705 - B158DRAFT_2028 0.14 -0.3 157,840 + B158DRAFT_2028 0.37 +1.3 157,840 + B158DRAFT_2028 0.37 +2.0 157,840 + B158DRAFT_2028 0.37 +0.6 157,848 - B158DRAFT_2028 0.39 +3.3 157,853 + B158DRAFT_2028 0.39 +2.3 157,910 - B158DRAFT_2028 0.49 +1.3 157,951 + B158DRAFT_2028 0.57 +1.5 157,995 + B158DRAFT_2028 0.64 -0.4 157,995 + B158DRAFT_2028 0.64 +1.1 158,003 - B158DRAFT_2028 0.66 +1.0 158,003 - B158DRAFT_2028 0.66 +1.6 158,028 + B158DRAFT_2028 0.70 -0.1 158,036 - B158DRAFT_2028 0.71 -0.0 158,036 - B158DRAFT_2028 0.71 +0.6 158,036 - B158DRAFT_2028 0.71 +1.0 158,042 - B158DRAFT_2028 0.72 +1.6 158,047 - B158DRAFT_2028 0.73 +3.2 158,047 - B158DRAFT_2028 0.73 +2.4 158,047 - B158DRAFT_2028 0.73 -0.9 158,076 + B158DRAFT_2028 0.78 -0.0 158,094 + B158DRAFT_2028 0.82 +0.6 158,113 - B158DRAFT_2028 0.85 +1.1 158,149 + +0.4 158,282 - +0.2 158,282 - -0.3 158,953 + -0.4 158,963 + -0.3 159,097 + -1.8 159,097 + -1.0 159,111 - +0.2 159,207 - -1.0 159,280 + B158DRAFT_2030 0.11 +1.7 159,288 - B158DRAFT_2030 0.12 -0.2 159,320 - B158DRAFT_2030 0.13 +1.0 159,321 - B158DRAFT_2030 0.13 -0.7 159,322 + B158DRAFT_2030 0.13 -3.3 159,323 - B158DRAFT_2030 0.13 -0.8 159,325 - B158DRAFT_2030 0.13 -0.7 159,340 + B158DRAFT_2030 0.14 +0.7 159,345 + B158DRAFT_2030 0.14 -1.7 159,348 - B158DRAFT_2030 0.15 -0.1 159,366 + B158DRAFT_2030 0.16 -1.1 159,375 + B158DRAFT_2030 0.16 -1.6 159,388 - B158DRAFT_2030 0.17 -0.4 159,399 - B158DRAFT_2030 0.17 -0.8 159,415 + B158DRAFT_2030 0.18 -1.2 159,416 + B158DRAFT_2030 0.18 -0.6 159,417 - B158DRAFT_2030 0.18 -0.6 159,417 - B158DRAFT_2030 0.18 -0.6 159,478 - B158DRAFT_2030 0.21 -0.3 159,570 - B158DRAFT_2030 0.26 -0.6 159,621 - B158DRAFT_2030 0.28 -0.1 159,627 - B158DRAFT_2030 0.29 -0.4 159,627 - B158DRAFT_2030 0.29 -2.0 159,754 + B158DRAFT_2030 0.35 -2.1 159,786 + B158DRAFT_2030 0.36 -1.2
Or see this region's nucleotide sequence