Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2025

Experiment: m.b. nitrite 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2023 and B158DRAFT_2024 are separated by 69 nucleotidesB158DRAFT_2024 and B158DRAFT_2025 are separated by 76 nucleotidesB158DRAFT_2025 and B158DRAFT_2026 are separated by 41 nucleotides B158DRAFT_2023: B158DRAFT_2023 - Zn-dependent hydrolases, including glyoxylases, at 153,250 to 154,173 _2023 B158DRAFT_2024: B158DRAFT_2024 - 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway), at 154,243 to 154,977 _2024 B158DRAFT_2025: B158DRAFT_2025 - Uncharacterized protein conserved in bacteria, at 155,054 to 155,488 _2025 B158DRAFT_2026: B158DRAFT_2026 - Uncharacterized protein conserved in bacteria, at 155,530 to 156,549 _2026 Position (kb) 155 156Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 154.168 kb on + strandat 154.177 kb on + strandat 154.185 kb on - strandat 154.273 kb on + strandat 154.315 kb on + strandat 154.322 kb on - strand, within B158DRAFT_2024at 154.322 kb on - strand, within B158DRAFT_2024at 154.322 kb on - strand, within B158DRAFT_2024at 154.323 kb on + strand, within B158DRAFT_2024at 154.545 kb on + strand, within B158DRAFT_2024at 154.597 kb on - strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.605 kb on + strand, within B158DRAFT_2024at 154.607 kb on - strand, within B158DRAFT_2024at 154.607 kb on - strand, within B158DRAFT_2024at 154.607 kb on - strand, within B158DRAFT_2024at 154.640 kb on - strand, within B158DRAFT_2024at 154.649 kb on - strand, within B158DRAFT_2024at 154.733 kb on - strand, within B158DRAFT_2024at 154.748 kb on + strand, within B158DRAFT_2024at 154.784 kb on + strand, within B158DRAFT_2024at 154.794 kb on + strand, within B158DRAFT_2024at 154.802 kb on - strand, within B158DRAFT_2024at 154.802 kb on - strand, within B158DRAFT_2024at 154.802 kb on - strand, within B158DRAFT_2024at 154.803 kb on - strand, within B158DRAFT_2024at 154.813 kb on + strand, within B158DRAFT_2024at 154.813 kb on + strand, within B158DRAFT_2024at 154.821 kb on - strand, within B158DRAFT_2024at 154.828 kb on + strand, within B158DRAFT_2024at 154.831 kb on - strand, within B158DRAFT_2024at 154.841 kb on + strand, within B158DRAFT_2024at 154.932 kb on + strandat 155.000 kb on - strandat 155.010 kb on + strandat 155.187 kb on - strand, within B158DRAFT_2025at 155.256 kb on + strand, within B158DRAFT_2025at 155.256 kb on + strand, within B158DRAFT_2025at 155.256 kb on + strand, within B158DRAFT_2025at 155.280 kb on + strand, within B158DRAFT_2025at 155.310 kb on - strand, within B158DRAFT_2025at 155.385 kb on + strand, within B158DRAFT_2025at 155.385 kb on + strand, within B158DRAFT_2025at 155.385 kb on + strand, within B158DRAFT_2025at 155.393 kb on - strand, within B158DRAFT_2025at 155.393 kb on - strand, within B158DRAFT_2025at 155.397 kb on + strand, within B158DRAFT_2025at 155.408 kb on + strand, within B158DRAFT_2025at 155.415 kb on - strand, within B158DRAFT_2025at 155.463 kb on + strandat 155.492 kb on - strandat 155.502 kb on - strandat 155.517 kb on - strandat 155.517 kb on - strandat 155.532 kb on + strandat 155.573 kb on + strandat 155.581 kb on - strandat 155.677 kb on + strand, within B158DRAFT_2026at 155.687 kb on + strand, within B158DRAFT_2026at 155.687 kb on + strand, within B158DRAFT_2026at 155.687 kb on + strand, within B158DRAFT_2026at 155.695 kb on - strand, within B158DRAFT_2026at 155.695 kb on - strand, within B158DRAFT_2026at 155.893 kb on + strand, within B158DRAFT_2026at 155.894 kb on - strand, within B158DRAFT_2026at 155.918 kb on - strand, within B158DRAFT_2026at 156.013 kb on + strand, within B158DRAFT_2026at 156.031 kb on - strand, within B158DRAFT_2026at 156.115 kb on - strand, within B158DRAFT_2026at 156.151 kb on - strand, within B158DRAFT_2026at 156.169 kb on - strand, within B158DRAFT_2026at 156.187 kb on + strand, within B158DRAFT_2026at 156.192 kb on + strand, within B158DRAFT_2026at 156.195 kb on - strand, within B158DRAFT_2026at 156.203 kb on + strand, within B158DRAFT_2026at 156.211 kb on - strand, within B158DRAFT_2026at 156.213 kb on + strand, within B158DRAFT_2026at 156.213 kb on + strand, within B158DRAFT_2026at 156.213 kb on - strand, within B158DRAFT_2026at 156.225 kb on - strand, within B158DRAFT_2026at 156.240 kb on + strand, within B158DRAFT_2026at 156.251 kb on + strand, within B158DRAFT_2026at 156.252 kb on - strand, within B158DRAFT_2026at 156.296 kb on + strand, within B158DRAFT_2026at 156.408 kb on + strand, within B158DRAFT_2026at 156.477 kb on + strandat 156.483 kb on - strandat 156.485 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM
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154,168 + -2.1
154,177 + +0.3
154,185 - +0.4
154,273 + +1.1
154,315 + -0.5
154,322 - B158DRAFT_2024 0.11 +0.7
154,322 - B158DRAFT_2024 0.11 -1.6
154,322 - B158DRAFT_2024 0.11 -1.0
154,323 + B158DRAFT_2024 0.11 -0.1
154,545 + B158DRAFT_2024 0.41 -0.4
154,597 - B158DRAFT_2024 0.48 -0.5
154,599 + B158DRAFT_2024 0.48 -0.7
154,599 + B158DRAFT_2024 0.48 +0.6
154,599 + B158DRAFT_2024 0.48 -0.7
154,599 + B158DRAFT_2024 0.48 -1.5
154,599 + B158DRAFT_2024 0.48 +1.3
154,599 + B158DRAFT_2024 0.48 -1.6
154,605 + B158DRAFT_2024 0.49 -0.5
154,607 - B158DRAFT_2024 0.50 -0.3
154,607 - B158DRAFT_2024 0.50 -0.6
154,607 - B158DRAFT_2024 0.50 +0.2
154,640 - B158DRAFT_2024 0.54 +0.7
154,649 - B158DRAFT_2024 0.55 +1.0
154,733 - B158DRAFT_2024 0.67 +2.7
154,748 + B158DRAFT_2024 0.69 +0.3
154,784 + B158DRAFT_2024 0.74 +0.1
154,794 + B158DRAFT_2024 0.75 -2.4
154,802 - B158DRAFT_2024 0.76 -1.9
154,802 - B158DRAFT_2024 0.76 -0.7
154,802 - B158DRAFT_2024 0.76 +0.6
154,803 - B158DRAFT_2024 0.76 +1.5
154,813 + B158DRAFT_2024 0.78 -0.1
154,813 + B158DRAFT_2024 0.78 +0.7
154,821 - B158DRAFT_2024 0.79 -0.9
154,828 + B158DRAFT_2024 0.80 -0.9
154,831 - B158DRAFT_2024 0.80 -1.6
154,841 + B158DRAFT_2024 0.81 -0.7
154,932 + -2.7
155,000 - -0.2
155,010 + +0.5
155,187 - B158DRAFT_2025 0.31 -0.0
155,256 + B158DRAFT_2025 0.46 -0.7
155,256 + B158DRAFT_2025 0.46 +1.7
155,256 + B158DRAFT_2025 0.46 -0.7
155,280 + B158DRAFT_2025 0.52 +1.0
155,310 - B158DRAFT_2025 0.59 +0.7
155,385 + B158DRAFT_2025 0.76 -1.7
155,385 + B158DRAFT_2025 0.76 -1.4
155,385 + B158DRAFT_2025 0.76 -0.8
155,393 - B158DRAFT_2025 0.78 -0.1
155,393 - B158DRAFT_2025 0.78 +1.7
155,397 + B158DRAFT_2025 0.79 -0.5
155,408 + B158DRAFT_2025 0.81 +1.5
155,415 - B158DRAFT_2025 0.83 -2.4
155,463 + -1.7
155,492 - -2.5
155,502 - -0.7
155,517 - +0.7
155,517 - -1.1
155,532 + -0.6
155,573 + -0.2
155,581 - -1.7
155,677 + B158DRAFT_2026 0.14 -1.9
155,687 + B158DRAFT_2026 0.15 +3.9
155,687 + B158DRAFT_2026 0.15 -1.1
155,687 + B158DRAFT_2026 0.15 -1.3
155,695 - B158DRAFT_2026 0.16 -2.8
155,695 - B158DRAFT_2026 0.16 +2.9
155,893 + B158DRAFT_2026 0.36 -2.1
155,894 - B158DRAFT_2026 0.36 +1.0
155,918 - B158DRAFT_2026 0.38 -0.6
156,013 + B158DRAFT_2026 0.47 -0.2
156,031 - B158DRAFT_2026 0.49 -1.6
156,115 - B158DRAFT_2026 0.57 +0.7
156,151 - B158DRAFT_2026 0.61 +0.6
156,169 - B158DRAFT_2026 0.63 -0.0
156,187 + B158DRAFT_2026 0.64 -0.2
156,192 + B158DRAFT_2026 0.65 +0.4
156,195 - B158DRAFT_2026 0.65 -2.2
156,203 + B158DRAFT_2026 0.66 -0.2
156,211 - B158DRAFT_2026 0.67 -0.4
156,213 + B158DRAFT_2026 0.67 -1.7
156,213 + B158DRAFT_2026 0.67 -0.4
156,213 - B158DRAFT_2026 0.67 -1.1
156,225 - B158DRAFT_2026 0.68 +0.1
156,240 + B158DRAFT_2026 0.70 -0.6
156,251 + B158DRAFT_2026 0.71 +0.5
156,252 - B158DRAFT_2026 0.71 +0.3
156,296 + B158DRAFT_2026 0.75 -1.9
156,408 + B158DRAFT_2026 0.86 -0.3
156,477 + -2.0
156,483 - +1.0
156,485 - +1.1

Or see this region's nucleotide sequence