Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1994

Experiment: m.b. nitrite 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1992 and B158DRAFT_1993 overlap by 11 nucleotidesB158DRAFT_1993 and B158DRAFT_1994 are separated by 12 nucleotidesB158DRAFT_1994 and B158DRAFT_1995 are separated by 38 nucleotides B158DRAFT_1992: B158DRAFT_1992 - biotin-dependent carboxylase uncharacterized domain, at 128,326 to 129,255 _1992 B158DRAFT_1993: B158DRAFT_1993 - TIGR00370 family protein, at 129,245 to 129,943 _1993 B158DRAFT_1994: B158DRAFT_1994 - Uncharacterized proteins, homologs of lactam utilization protein B, at 129,956 to 130,714 _1994 B158DRAFT_1995: B158DRAFT_1995 - Mn2+ and Fe2+ transporters of the NRAMP family, at 130,753 to 131,976 _1995 Position (kb) 129 130 131Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 128.958 kb on - strand, within B158DRAFT_1992at 129.047 kb on + strand, within B158DRAFT_1992at 129.047 kb on + strand, within B158DRAFT_1992at 129.047 kb on + strand, within B158DRAFT_1992at 129.047 kb on + strand, within B158DRAFT_1992at 129.055 kb on - strand, within B158DRAFT_1992at 129.055 kb on - strand, within B158DRAFT_1992at 129.055 kb on - strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.114 kb on - strand, within B158DRAFT_1992at 129.114 kb on - strand, within B158DRAFT_1992at 129.114 kb on - strand, within B158DRAFT_1992at 129.114 kb on - strand, within B158DRAFT_1992at 129.114 kb on - strand, within B158DRAFT_1992at 129.153 kb on + strand, within B158DRAFT_1992at 129.186 kb on + strandat 129.194 kb on - strandat 129.220 kb on + strandat 129.283 kb on + strandat 129.293 kb on + strandat 129.372 kb on - strand, within B158DRAFT_1993at 129.394 kb on + strand, within B158DRAFT_1993at 129.481 kb on + strand, within B158DRAFT_1993at 129.486 kb on + strand, within B158DRAFT_1993at 129.489 kb on - strand, within B158DRAFT_1993at 129.502 kb on + strand, within B158DRAFT_1993at 129.555 kb on + strand, within B158DRAFT_1993at 129.560 kb on + strand, within B158DRAFT_1993at 129.560 kb on + strand, within B158DRAFT_1993at 129.563 kb on - strand, within B158DRAFT_1993at 129.577 kb on - strand, within B158DRAFT_1993at 129.577 kb on - strand, within B158DRAFT_1993at 129.599 kb on - strand, within B158DRAFT_1993at 129.619 kb on - strand, within B158DRAFT_1993at 129.898 kb on + strandat 130.054 kb on + strand, within B158DRAFT_1994at 130.190 kb on - strand, within B158DRAFT_1994at 130.211 kb on + strand, within B158DRAFT_1994at 130.256 kb on - strand, within B158DRAFT_1994at 130.336 kb on - strand, within B158DRAFT_1994at 130.448 kb on - strand, within B158DRAFT_1994at 130.511 kb on + strand, within B158DRAFT_1994at 130.519 kb on - strand, within B158DRAFT_1994at 130.558 kb on + strand, within B158DRAFT_1994at 130.586 kb on + strand, within B158DRAFT_1994at 130.625 kb on - strand, within B158DRAFT_1994at 130.734 kb on + strandat 130.736 kb on + strandat 130.742 kb on - strandat 130.797 kb on + strandat 130.797 kb on + strandat 130.797 kb on + strandat 130.797 kb on + strandat 130.797 kb on + strandat 130.805 kb on - strandat 130.805 kb on - strandat 130.805 kb on - strandat 130.805 kb on - strandat 130.805 kb on - strandat 130.805 kb on - strandat 130.805 kb on - strandat 130.805 kb on - strandat 130.805 kb on - strandat 130.805 kb on - strandat 130.805 kb on - strandat 130.805 kb on - strandat 130.805 kb on - strandat 130.805 kb on - strandat 131.005 kb on + strand, within B158DRAFT_1995at 131.013 kb on - strand, within B158DRAFT_1995at 131.040 kb on - strand, within B158DRAFT_1995at 131.052 kb on + strand, within B158DRAFT_1995at 131.074 kb on + strand, within B158DRAFT_1995at 131.077 kb on - strand, within B158DRAFT_1995at 131.080 kb on + strand, within B158DRAFT_1995at 131.088 kb on - strand, within B158DRAFT_1995at 131.174 kb on - strand, within B158DRAFT_1995at 131.386 kb on + strand, within B158DRAFT_1995at 131.409 kb on - strand, within B158DRAFT_1995at 131.511 kb on - strand, within B158DRAFT_1995at 131.549 kb on - strand, within B158DRAFT_1995at 131.549 kb on - strand, within B158DRAFT_1995at 131.555 kb on + strand, within B158DRAFT_1995at 131.555 kb on + strand, within B158DRAFT_1995at 131.555 kb on + strand, within B158DRAFT_1995at 131.555 kb on + strand, within B158DRAFT_1995at 131.563 kb on - strand, within B158DRAFT_1995at 131.563 kb on - strand, within B158DRAFT_1995at 131.563 kb on - strand, within B158DRAFT_1995at 131.563 kb on - strand, within B158DRAFT_1995at 131.563 kb on - strand, within B158DRAFT_1995at 131.563 kb on - strand, within B158DRAFT_1995at 131.563 kb on - strand, within B158DRAFT_1995at 131.568 kb on - strand, within B158DRAFT_1995at 131.587 kb on + strand, within B158DRAFT_1995at 131.587 kb on + strand, within B158DRAFT_1995at 131.610 kb on - strand, within B158DRAFT_1995at 131.631 kb on - strand, within B158DRAFT_1995at 131.668 kb on + strand, within B158DRAFT_1995

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM
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128,958 - B158DRAFT_1992 0.68 +0.2
129,047 + B158DRAFT_1992 0.78 +0.1
129,047 + B158DRAFT_1992 0.78 -0.6
129,047 + B158DRAFT_1992 0.78 -0.6
129,047 + B158DRAFT_1992 0.78 +0.1
129,055 - B158DRAFT_1992 0.78 -0.5
129,055 - B158DRAFT_1992 0.78 -1.5
129,055 - B158DRAFT_1992 0.78 -3.0
129,106 + B158DRAFT_1992 0.84 -1.5
129,106 + B158DRAFT_1992 0.84 +2.0
129,106 + B158DRAFT_1992 0.84 +1.0
129,106 + B158DRAFT_1992 0.84 -2.6
129,106 + B158DRAFT_1992 0.84 +0.2
129,106 + B158DRAFT_1992 0.84 +0.5
129,106 + B158DRAFT_1992 0.84 -0.9
129,106 + B158DRAFT_1992 0.84 -0.6
129,106 + B158DRAFT_1992 0.84 -2.5
129,114 - B158DRAFT_1992 0.85 -2.3
129,114 - B158DRAFT_1992 0.85 +0.9
129,114 - B158DRAFT_1992 0.85 -1.0
129,114 - B158DRAFT_1992 0.85 +0.9
129,114 - B158DRAFT_1992 0.85 -0.5
129,153 + B158DRAFT_1992 0.89 -1.3
129,186 + +1.2
129,194 - -0.7
129,220 + -0.5
129,283 + +0.4
129,293 + +1.0
129,372 - B158DRAFT_1993 0.18 +0.1
129,394 + B158DRAFT_1993 0.21 -2.7
129,481 + B158DRAFT_1993 0.34 -0.6
129,486 + B158DRAFT_1993 0.34 -0.8
129,489 - B158DRAFT_1993 0.35 -1.0
129,502 + B158DRAFT_1993 0.37 -2.4
129,555 + B158DRAFT_1993 0.44 -0.3
129,560 + B158DRAFT_1993 0.45 -0.6
129,560 + B158DRAFT_1993 0.45 -1.0
129,563 - B158DRAFT_1993 0.45 -1.0
129,577 - B158DRAFT_1993 0.47 -0.2
129,577 - B158DRAFT_1993 0.47 +0.7
129,599 - B158DRAFT_1993 0.51 -1.7
129,619 - B158DRAFT_1993 0.54 -0.2
129,898 + -0.2
130,054 + B158DRAFT_1994 0.13 +1.4
130,190 - B158DRAFT_1994 0.31 -1.1
130,211 + B158DRAFT_1994 0.34 -0.9
130,256 - B158DRAFT_1994 0.40 -0.8
130,336 - B158DRAFT_1994 0.50 -1.0
130,448 - B158DRAFT_1994 0.65 -0.1
130,511 + B158DRAFT_1994 0.73 -1.2
130,519 - B158DRAFT_1994 0.74 -0.0
130,558 + B158DRAFT_1994 0.79 +0.7
130,586 + B158DRAFT_1994 0.83 -1.7
130,625 - B158DRAFT_1994 0.88 -0.6
130,734 + -2.3
130,736 + +2.6
130,742 - -0.5
130,797 + +1.2
130,797 + +2.3
130,797 + -1.2
130,797 + -1.6
130,797 + -1.6
130,805 - -0.0
130,805 - -3.4
130,805 - +0.6
130,805 - +0.7
130,805 - -1.1
130,805 - +1.2
130,805 - -0.6
130,805 - +0.6
130,805 - -0.3
130,805 - +0.4
130,805 - -0.6
130,805 - -1.1
130,805 - -0.2
130,805 - -0.5
131,005 + B158DRAFT_1995 0.21 -0.6
131,013 - B158DRAFT_1995 0.21 -2.0
131,040 - B158DRAFT_1995 0.23 +0.5
131,052 + B158DRAFT_1995 0.24 -1.1
131,074 + B158DRAFT_1995 0.26 -0.7
131,077 - B158DRAFT_1995 0.26 -1.0
131,080 + B158DRAFT_1995 0.27 -1.2
131,088 - B158DRAFT_1995 0.27 -2.0
131,174 - B158DRAFT_1995 0.34 -1.0
131,386 + B158DRAFT_1995 0.52 -2.5
131,409 - B158DRAFT_1995 0.54 -1.7
131,511 - B158DRAFT_1995 0.62 -2.4
131,549 - B158DRAFT_1995 0.65 -0.1
131,549 - B158DRAFT_1995 0.65 -1.3
131,555 + B158DRAFT_1995 0.66 -1.1
131,555 + B158DRAFT_1995 0.66 -1.2
131,555 + B158DRAFT_1995 0.66 -0.6
131,555 + B158DRAFT_1995 0.66 -2.7
131,563 - B158DRAFT_1995 0.66 -0.7
131,563 - B158DRAFT_1995 0.66 -2.3
131,563 - B158DRAFT_1995 0.66 -0.7
131,563 - B158DRAFT_1995 0.66 +0.5
131,563 - B158DRAFT_1995 0.66 +0.6
131,563 - B158DRAFT_1995 0.66 -1.9
131,563 - B158DRAFT_1995 0.66 +0.2
131,568 - B158DRAFT_1995 0.67 -1.4
131,587 + B158DRAFT_1995 0.68 -0.0
131,587 + B158DRAFT_1995 0.68 -1.4
131,610 - B158DRAFT_1995 0.70 -1.0
131,631 - B158DRAFT_1995 0.72 +0.1
131,668 + B158DRAFT_1995 0.75 -0.2

Or see this region's nucleotide sequence