Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1989 and B158DRAFT_1990 are separated by 72 nucleotides B158DRAFT_1990 and B158DRAFT_1991 are separated by 29 nucleotides B158DRAFT_1991 and B158DRAFT_1992 overlap by 4 nucleotides B158DRAFT_1992 and B158DRAFT_1993 overlap by 11 nucleotides
B158DRAFT_1989: B158DRAFT_1989 - ribonuclease R, at 124,395 to 126,809
_1989
B158DRAFT_1990: B158DRAFT_1990 - 23S rRNA Gm-2251 2'-O-methyltransferase (EC 2.1.1.185), at 126,882 to 127,622
_1990
B158DRAFT_1991: B158DRAFT_1991 - hypothetical protein, at 127,652 to 128,329
_1991
B158DRAFT_1992: B158DRAFT_1992 - biotin-dependent carboxylase uncharacterized domain, at 128,326 to 129,255
_1992
B158DRAFT_1993: B158DRAFT_1993 - TIGR00370 family protein, at 129,245 to 129,943
_1993
Position (kb) 127
128
129 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 126.894 kb on + strand at 126.937 kb on - strand at 127.006 kb on - strand, within B158DRAFT_1990 at 127.013 kb on + strand, within B158DRAFT_1990 at 127.239 kb on - strand, within B158DRAFT_1990 at 127.256 kb on - strand, within B158DRAFT_1990 at 127.266 kb on + strand, within B158DRAFT_1990 at 127.274 kb on - strand, within B158DRAFT_1990 at 127.343 kb on - strand, within B158DRAFT_1990 at 127.488 kb on + strand, within B158DRAFT_1990 at 127.489 kb on - strand, within B158DRAFT_1990 at 127.496 kb on - strand, within B158DRAFT_1990 at 127.588 kb on + strand at 127.901 kb on - strand, within B158DRAFT_1991 at 128.166 kb on + strand, within B158DRAFT_1991 at 128.174 kb on - strand, within B158DRAFT_1991 at 128.203 kb on + strand, within B158DRAFT_1991 at 128.423 kb on + strand, within B158DRAFT_1992 at 128.456 kb on + strand, within B158DRAFT_1992 at 128.456 kb on + strand, within B158DRAFT_1992 at 128.456 kb on + strand, within B158DRAFT_1992 at 128.464 kb on - strand, within B158DRAFT_1992 at 128.748 kb on - strand, within B158DRAFT_1992 at 128.794 kb on + strand, within B158DRAFT_1992 at 128.950 kb on + strand, within B158DRAFT_1992 at 128.958 kb on - strand, within B158DRAFT_1992 at 129.047 kb on + strand, within B158DRAFT_1992 at 129.047 kb on + strand, within B158DRAFT_1992 at 129.047 kb on + strand, within B158DRAFT_1992 at 129.047 kb on + strand, within B158DRAFT_1992 at 129.055 kb on - strand, within B158DRAFT_1992 at 129.055 kb on - strand, within B158DRAFT_1992 at 129.055 kb on - strand, within B158DRAFT_1992 at 129.106 kb on + strand, within B158DRAFT_1992 at 129.106 kb on + strand, within B158DRAFT_1992 at 129.106 kb on + strand, within B158DRAFT_1992 at 129.106 kb on + strand, within B158DRAFT_1992 at 129.106 kb on + strand, within B158DRAFT_1992 at 129.106 kb on + strand, within B158DRAFT_1992 at 129.106 kb on + strand, within B158DRAFT_1992 at 129.106 kb on + strand, within B158DRAFT_1992 at 129.106 kb on + strand, within B158DRAFT_1992 at 129.114 kb on - strand, within B158DRAFT_1992 at 129.114 kb on - strand, within B158DRAFT_1992 at 129.114 kb on - strand, within B158DRAFT_1992 at 129.114 kb on - strand, within B158DRAFT_1992 at 129.114 kb on - strand, within B158DRAFT_1992 at 129.153 kb on + strand, within B158DRAFT_1992 at 129.186 kb on + strand at 129.194 kb on - strand at 129.220 kb on + strand at 129.283 kb on + strand at 129.293 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 126,894 + +0.5 126,937 - -1.2 127,006 - B158DRAFT_1990 0.17 -1.3 127,013 + B158DRAFT_1990 0.18 -0.6 127,239 - B158DRAFT_1990 0.48 -0.7 127,256 - B158DRAFT_1990 0.50 -2.1 127,266 + B158DRAFT_1990 0.52 -1.5 127,274 - B158DRAFT_1990 0.53 -0.6 127,343 - B158DRAFT_1990 0.62 -1.4 127,488 + B158DRAFT_1990 0.82 -1.2 127,489 - B158DRAFT_1990 0.82 -0.8 127,496 - B158DRAFT_1990 0.83 +0.5 127,588 + -0.2 127,901 - B158DRAFT_1991 0.37 +0.0 128,166 + B158DRAFT_1991 0.76 +1.2 128,174 - B158DRAFT_1991 0.77 -0.1 128,203 + B158DRAFT_1991 0.81 -0.3 128,423 + B158DRAFT_1992 0.10 +2.4 128,456 + B158DRAFT_1992 0.14 -0.6 128,456 + B158DRAFT_1992 0.14 -0.4 128,456 + B158DRAFT_1992 0.14 -0.9 128,464 - B158DRAFT_1992 0.15 +0.5 128,748 - B158DRAFT_1992 0.45 -0.4 128,794 + B158DRAFT_1992 0.50 -1.5 128,950 + B158DRAFT_1992 0.67 -0.0 128,958 - B158DRAFT_1992 0.68 +0.2 129,047 + B158DRAFT_1992 0.78 +0.1 129,047 + B158DRAFT_1992 0.78 -0.6 129,047 + B158DRAFT_1992 0.78 -0.6 129,047 + B158DRAFT_1992 0.78 +0.1 129,055 - B158DRAFT_1992 0.78 -0.5 129,055 - B158DRAFT_1992 0.78 -1.5 129,055 - B158DRAFT_1992 0.78 -3.0 129,106 + B158DRAFT_1992 0.84 -1.5 129,106 + B158DRAFT_1992 0.84 +2.0 129,106 + B158DRAFT_1992 0.84 +1.0 129,106 + B158DRAFT_1992 0.84 -2.6 129,106 + B158DRAFT_1992 0.84 +0.2 129,106 + B158DRAFT_1992 0.84 +0.5 129,106 + B158DRAFT_1992 0.84 -0.9 129,106 + B158DRAFT_1992 0.84 -0.6 129,106 + B158DRAFT_1992 0.84 -2.5 129,114 - B158DRAFT_1992 0.85 -2.3 129,114 - B158DRAFT_1992 0.85 +0.9 129,114 - B158DRAFT_1992 0.85 -1.0 129,114 - B158DRAFT_1992 0.85 +0.9 129,114 - B158DRAFT_1992 0.85 -0.5 129,153 + B158DRAFT_1992 0.89 -1.3 129,186 + +1.2 129,194 - -0.7 129,220 + -0.5 129,283 + +0.4 129,293 + +1.0
Or see this region's nucleotide sequence